| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/util/bitset/ |
| H A D | bmintervals.h | 266 block_idx_type nblock_left = (left >> bm::set_block_shift); in is_interval()
267 block_idx_type nblock_right = (right >> bm::set_block_shift); in is_interval()
332 block_idx_type nb = (from >> bm::set_block_shift); in find_interval_start()
456 block_idx_type nb = (from >> bm::set_block_shift); in find_interval_end()
481 block_idx_type nblock_right = (bm::id_max >> bm::set_block_shift); in find_interval_end()
631 block_idx_type nb = (pos >> bm::set_block_shift); in go_to_impl()
726 block_idx_type nb = (interval_.first >> bm::set_block_shift); in advance()
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| H A D | bm.h | 3112 unsigned nb = unsigned(n >> bm::set_block_shift); in get_bit()
3573 block_idx_type nblock = (n >> bm::set_block_shift); in set_bit_no_check()
3740 nblock = (n >> bm::set_block_shift); in import()
3764 nblock = (n >> bm::set_block_shift); in import()
3817 block_idx_type nblock = (n >> bm::set_block_shift); in set_bit_no_check()
3901 block_idx_type nblock = (n >> bm::set_block_shift); in inc()
4144 block_idx_type nb = (from >> bm::set_block_shift); in find_reverse()
4393 nb = (from >> bm::set_block_shift); in find_rank()
4495 block_idx_type nb = (prev >> bm::set_block_shift); in check_or_next()
4619 block_idx_type nb = (n >> bm::set_block_shift); in insert()
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| H A D | bmsparsevec_algo.h | 1100 nb = unsigned(idx >> bm::set_block_shift); in remap()
1193 size_type nb = (i >> bm::set_block_shift); in bind()
1747 size_type nb_l = (l >> bm::set_block_shift); in bfind_eq_str()
1748 size_type nb_r = (r >> bm::set_block_shift); in bfind_eq_str()
1761 nb_l = unsigned(l >> bm::set_block_shift); in bfind_eq_str()
1762 nb_r = unsigned(r >> bm::set_block_shift); in bfind_eq_str()
1767 size_type max_nb = sv.size() >> bm::set_block_shift; in bfind_eq_str()
1805 size_type nb = (mid >> bm::set_block_shift); in bfind_eq_str()
2122 size_type nb = (idx >> bm::set_block_shift); in compare_str()
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| H A D | bmsparsevec.h | 1165 block_idx_type nb = (idx[i] >> bm::set_block_shift); in gather()
1173 for (; (r < size) && (nb == (idx[r] >> bm::set_block_shift)); ++r) in gather()
1184 block_idx_type nb_next = (idx[r] >> bm::set_block_shift); in gather()
1310 block_idx_type nb = (start >> bm::set_block_shift); in extract_range()
1326 block_idx_type nb1 = (k >> bm::set_block_shift); in extract_range()
1663 block_idx_type nb = (idx >> bm::set_block_shift); in set_value_no_null()
2123 prev_nb_ = sv_->size() >> bm::set_block_shift; in back_insert_iterator()
2245 block_idx_type nb = sv_->size() >> bm::set_block_shift; in flush()
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| H A D | bmalgo_impl.h | 994 SIZE_TYPE nb = v >> bm::set_block_shift; in block_range_scan()
1027 typename BV::block_idx_type nblock = (*first) >> bm::set_block_shift; in combine_or()
1107 typename BV::block_idx_type nblock = ((*first) >> bm::set_block_shift); in combine_xor()
1194 typename BV::block_idx_type nblock = (*first) >> bm::set_block_shift; in combine_sub()
1840 block_idx_type nblock_left = (left >> bm::set_block_shift); in for_each_bit_range_no_check()
1841 block_idx_type nblock_right = (right >> bm::set_block_shift); in for_each_bit_range_no_check()
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| H A D | bmconst.h | 55 const unsigned set_block_shift = 16u; variable
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| H A D | bmaggregator.h | 834 block_idx_type nblock_from = (range_from_ >> bm::set_block_shift); in find_first_and_sub()
835 block_idx_type nblock_to = (range_to_ >> bm::set_block_shift); in find_first_and_sub()
1337 block_idx_type nb_from = (range_from_ >> bm::set_block_shift); in process_bit_blocks_and()
1338 block_idx_type nb_to = (range_to_ >> bm::set_block_shift); in process_bit_blocks_and()
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| H A D | bmavx512.h | 1395 … __m256i nbA = _mm256_srli_epi32(idxA, bm::set_block_shift); // idx[k] >> bm::set_block_shift in avx2_idx_arr_block_lookup()
1401 __m256i nbB = _mm256_srli_epi32(idxB, bm::set_block_shift); in avx2_idx_arr_block_lookup()
1409 if (nb != unsigned(idx[k] >> bm::set_block_shift)) in avx2_idx_arr_block_lookup()
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| H A D | bmsse4.h | 1272 __m128i nbA = _mm_srli_epi32(idxA, bm::set_block_shift); // idx[k] >> bm::set_block_shift in sse42_idx_arr_block_lookup()
1273 __m128i nbB = _mm_srli_epi32(idxB, bm::set_block_shift); in sse42_idx_arr_block_lookup()
1282 if (nb != unsigned(idx[k] >> bm::set_block_shift)) in sse42_idx_arr_block_lookup()
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| H A D | bmbmatrix.h | 965 block_idx_type nb = (pos >> bm::set_block_shift); in get_octet()
1076 block_idx_type nb = (pos >> bm::set_block_shift); in get_half_octet()
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| H A D | bmserial.h | 4240 block_idx_type nb_to = (idx_to_ >> bm::set_block_shift); in deserialize()
4407 block_idx_type nb_from = (idx_from_ >> bm::set_block_shift); in deserialize()
4702 block_idx_type nb_from = (idx_from_ >> bm::set_block_shift); in xor_decode()
4703 block_idx_type nb_to = (idx_to_ >> bm::set_block_shift); in xor_decode()
6751 nb_range_from_ = (from >> bm::set_block_shift); in set_range()
6752 nb_range_to_ = (to >> bm::set_block_shift); in set_range()
6811 block_idx_type nblock_last = (bm::id_max >> bm::set_block_shift); in finalize_target_vector()
7185 size_type last_nb = (last_id >> bm::set_block_shift); in deserialize()
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| H A D | bmstrsparsevec.h | 2165 prev_nb_ = sv_->size() >> bm::set_block_shift; in back_insert_iterator()
2213 block_idx_type nb = sv_->size() >> bm::set_block_shift; in flush()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/util/bitset/ |
| H A D | bmintervals.h | 266 block_idx_type nblock_left = (left >> bm::set_block_shift); in is_interval()
267 block_idx_type nblock_right = (right >> bm::set_block_shift); in is_interval()
332 block_idx_type nb = (from >> bm::set_block_shift); in find_interval_start()
456 block_idx_type nb = (from >> bm::set_block_shift); in find_interval_end()
481 block_idx_type nblock_right = (bm::id_max >> bm::set_block_shift); in find_interval_end()
631 block_idx_type nb = (pos >> bm::set_block_shift); in go_to_impl()
726 block_idx_type nb = (interval_.first >> bm::set_block_shift); in advance()
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| H A D | bm.h | 3112 unsigned nb = unsigned(n >> bm::set_block_shift); in get_bit()
3573 block_idx_type nblock = (n >> bm::set_block_shift); in set_bit_no_check()
3740 nblock = (n >> bm::set_block_shift); in import()
3764 nblock = (n >> bm::set_block_shift); in import()
3817 block_idx_type nblock = (n >> bm::set_block_shift); in set_bit_no_check()
3901 block_idx_type nblock = (n >> bm::set_block_shift); in inc()
4144 block_idx_type nb = (from >> bm::set_block_shift); in find_reverse()
4393 nb = (from >> bm::set_block_shift); in find_rank()
4495 block_idx_type nb = (prev >> bm::set_block_shift); in check_or_next()
4619 block_idx_type nb = (n >> bm::set_block_shift); in insert()
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| H A D | bmsparsevec_algo.h | 1100 nb = unsigned(idx >> bm::set_block_shift); in remap()
1193 size_type nb = (i >> bm::set_block_shift); in bind()
1747 size_type nb_l = (l >> bm::set_block_shift); in bfind_eq_str()
1748 size_type nb_r = (r >> bm::set_block_shift); in bfind_eq_str()
1761 nb_l = unsigned(l >> bm::set_block_shift); in bfind_eq_str()
1762 nb_r = unsigned(r >> bm::set_block_shift); in bfind_eq_str()
1767 size_type max_nb = sv.size() >> bm::set_block_shift; in bfind_eq_str()
1805 size_type nb = (mid >> bm::set_block_shift); in bfind_eq_str()
2122 size_type nb = (idx >> bm::set_block_shift); in compare_str()
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| H A D | bmsparsevec.h | 1165 block_idx_type nb = (idx[i] >> bm::set_block_shift); in gather()
1173 for (; (r < size) && (nb == (idx[r] >> bm::set_block_shift)); ++r) in gather()
1184 block_idx_type nb_next = (idx[r] >> bm::set_block_shift); in gather()
1310 block_idx_type nb = (start >> bm::set_block_shift); in extract_range()
1326 block_idx_type nb1 = (k >> bm::set_block_shift); in extract_range()
1663 block_idx_type nb = (idx >> bm::set_block_shift); in set_value_no_null()
2123 prev_nb_ = sv_->size() >> bm::set_block_shift; in back_insert_iterator()
2245 block_idx_type nb = sv_->size() >> bm::set_block_shift; in flush()
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| H A D | bmalgo_impl.h | 994 SIZE_TYPE nb = v >> bm::set_block_shift; in block_range_scan()
1027 typename BV::block_idx_type nblock = (*first) >> bm::set_block_shift; in combine_or()
1107 typename BV::block_idx_type nblock = ((*first) >> bm::set_block_shift); in combine_xor()
1194 typename BV::block_idx_type nblock = (*first) >> bm::set_block_shift; in combine_sub()
1840 block_idx_type nblock_left = (left >> bm::set_block_shift); in for_each_bit_range_no_check()
1841 block_idx_type nblock_right = (right >> bm::set_block_shift); in for_each_bit_range_no_check()
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| H A D | bmconst.h | 55 const unsigned set_block_shift = 16u; variable
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| H A D | bmaggregator.h | 834 block_idx_type nblock_from = (range_from_ >> bm::set_block_shift); in find_first_and_sub()
835 block_idx_type nblock_to = (range_to_ >> bm::set_block_shift); in find_first_and_sub()
1337 block_idx_type nb_from = (range_from_ >> bm::set_block_shift); in process_bit_blocks_and()
1338 block_idx_type nb_to = (range_to_ >> bm::set_block_shift); in process_bit_blocks_and()
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| H A D | bmavx512.h | 1395 … __m256i nbA = _mm256_srli_epi32(idxA, bm::set_block_shift); // idx[k] >> bm::set_block_shift in avx2_idx_arr_block_lookup()
1401 __m256i nbB = _mm256_srli_epi32(idxB, bm::set_block_shift); in avx2_idx_arr_block_lookup()
1409 if (nb != unsigned(idx[k] >> bm::set_block_shift)) in avx2_idx_arr_block_lookup()
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| H A D | bmsse4.h | 1272 __m128i nbA = _mm_srli_epi32(idxA, bm::set_block_shift); // idx[k] >> bm::set_block_shift in sse42_idx_arr_block_lookup()
1273 __m128i nbB = _mm_srli_epi32(idxB, bm::set_block_shift); in sse42_idx_arr_block_lookup()
1282 if (nb != unsigned(idx[k] >> bm::set_block_shift)) in sse42_idx_arr_block_lookup()
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| H A D | bmbmatrix.h | 965 block_idx_type nb = (pos >> bm::set_block_shift); in get_octet()
1076 block_idx_type nb = (pos >> bm::set_block_shift); in get_half_octet()
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| H A D | bmserial.h | 4240 block_idx_type nb_to = (idx_to_ >> bm::set_block_shift); in deserialize()
4407 block_idx_type nb_from = (idx_from_ >> bm::set_block_shift); in deserialize()
4702 block_idx_type nb_from = (idx_from_ >> bm::set_block_shift); in xor_decode()
4703 block_idx_type nb_to = (idx_to_ >> bm::set_block_shift); in xor_decode()
6751 nb_range_from_ = (from >> bm::set_block_shift); in set_range()
6752 nb_range_to_ = (to >> bm::set_block_shift); in set_range()
6811 block_idx_type nblock_last = (bm::id_max >> bm::set_block_shift); in finalize_target_vector()
7185 size_type last_nb = (last_id >> bm::set_block_shift); in deserialize()
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| H A D | bmstrsparsevec.h | 2165 prev_nb_ = sv_->size() >> bm::set_block_shift; in back_insert_iterator()
2213 block_idx_type nb = sv_->size() >> bm::set_block_shift; in flush()
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| H A D | bmdbg.h | 554 typename SV::size_type nb_max = (sz >> bm::set_block_shift);
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