Searched refs:siphead (Results 1 – 5 of 5) sorted by relevance
| /dports/biology/ncbi-toolkit/ncbi/desktop/ |
| H A D | salfiles.c | 313 SeqIdPtr siphead = NULL, in NewFastaRead() local
358 j=SeqIdOrderInBioseqIdList(sip,siphead); in NewFastaRead()
380 siphead = AddSeqId (&siphead, siptmp); in NewFastaRead()
461 *siplst = siphead; in NewFastaRead()
463 SeqIdFree (siphead); in NewFastaRead()
1208 SeqIdPtr siphead=NULL, in NameMacawRead() local
1235 siphead = AddSeqId (&siphead, sip); in NameMacawRead()
1250 return siphead; in NameMacawRead()
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| H A D | salsa.c | 941 siphead = NULL; in create_list_alignedsegs() local
969 siphead = AddSeqId (&siphead, sip); in create_list_alignedsegs()
986 siphead = AddSeqId (&siphead, ddp->id->next); in create_list_alignedsegs()
1001 ddp = DenseDiagCreate (dim, siphead, &start, lens, NULL, NULL); in create_list_alignedsegs()
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| /dports/biology/ncbi-toolkit/ncbi/demo/ |
| H A D | scantest.c | 174 SeqIdPtr sip, siphead; in PrintFirstSeqId() local
191 siphead = SeqIdSetDup (fbsp->id); in PrintFirstSeqId()
192 for (sip = siphead; sip != NULL; sip = sip->next) { in PrintFirstSeqId()
200 SeqIdWrite (siphead, buf, PRINTID_FASTA_LONG, buflen); in PrintFirstSeqId()
201 SeqIdSetFree (siphead); in PrintFirstSeqId()
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| H A D | cleanasn.c | 8879 SeqIdPtr sip, siphead; in DoOverlapReport() local
8891 siphead = SeqIdSetDup (bsp->id); in DoOverlapReport()
8892 for (sip = siphead; sip != NULL; sip = sip->next) { in DoOverlapReport()
8895 SeqIdWrite (siphead, buf0, PRINTID_FASTA_LONG, sizeof (buf0)); in DoOverlapReport()
8896 SeqIdSetFree (siphead); in DoOverlapReport()
12403 SeqIdPtr sip, siphead; in DoCleanup() local
12431 siphead = SeqIdSetDup (bsp->id); in DoCleanup()
12432 for (sip = siphead; sip != NULL; sip = sip->next) { in DoCleanup()
12451 SeqIdWrite (siphead, cfp->buf, PRINTID_FASTA_LONG, sizeof (cfp->buf)); in DoCleanup()
12452 SeqIdSetFree (siphead); in DoCleanup()
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| /dports/biology/ncbi-toolkit/ncbi/api/ |
| H A D | salsap.c | 4177 siphead, siptmp, in multseqalign_from_pairseqalign() local
4274 siphead = SeqIdDup (sip); in multseqalign_from_pairseqalign()
4275 sipcur = siphead; in multseqalign_from_pairseqalign()
4588 sap = LocalAlignToSeqAnnotDimn (vnp, siphead, vnpfrom, curnseq, max_lens, vnpstrand, TRUE); in multseqalign_from_pairseqalign()
4589 sipcur = siphead; in multseqalign_from_pairseqalign()
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