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Searched refs:sjNovelEnd (Results 1 – 4 of 4) sorted by relevance

/dports/biology/star/STAR-2.7.9a/source/
H A DoutputSJ.cpp144 P.sjNovelEnd = new uint [P.sjNovelN]; in outputSJ()
153 P.sjNovelEnd[isj]=*oneSJ.start+(uint)(*oneSJ.gap)-1; in outputSJ()
H A DParameters.h345 uint64 sjNovelN, *sjNovelStart, *sjNovelEnd; //novel junctions collapased and filtered variable
H A DReadAlign_stitchWindowSeeds.cpp43 … if ( binarySearch2(jS,jE,P.sjNovelStart,P.sjNovelEnd,P.sjNovelN) < 0 ) return; in stitchWindowSeeds()
H A DstitchWindowAligns.cpp174 if ( binarySearch2(jS,jE,P.sjNovelStart,P.sjNovelEnd,P.sjNovelN) < 0 ) return; in stitchWindowAligns()