| /dports/biology/mothur/mothur-1.46.1/source/ |
| H A D | clusterclassic.cpp | 16 smallDist = MOTHURMAX; in ClusterClassic()
112 if (distance < smallDist) { smallDist = distance; } in readPhylipFile()
131 if (distance < smallDist) { smallDist = distance; } in readPhylipFile()
166 if (distance < smallDist) { smallDist = distance; } in readPhylipFile()
187 if (distance < smallDist) { smallDist = distance; } in readPhylipFile()
298 if (distance < smallDist) { smallDist = distance; } in readPhylipFile()
313 if (distance < smallDist) { smallDist = distance; } in readPhylipFile()
347 if (distance < smallDist) { smallDist = distance; } in readPhylipFile()
366 if (distance < smallDist) { smallDist = distance; } in readPhylipFile()
411 smallDist = aboveCutoff; in getSmallCell()
[all …]
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| H A D | clusterclassic.h | 28 double getSmallDist() { return smallDist; } in getSmallDist()
49 double smallDist; variable
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| H A D | cluster.cpp | 37 rabund->setLabel(toString(smallDist)); in clusterBins()
52 list->setLabel(toString(smallDist)); in clusterNames()
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| H A D | cluster.hpp | 36 float smallDist, adjust; member in Cluster
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| /dports/biology/mothur/mothur-1.46.1/source/datastructures/ |
| H A D | sparsematrix.cpp | 8 SparseMatrix::SparseMatrix() : numNodes(0), minsIndex(0), smallDist(MOTHURMAX){ m = MothurOut::get… in SparseMatrix()
19 return smallDist; in getSmallDist()
48 if(value.dist < smallDist){ in addCell()
49 smallDist = value.dist; in addCell()
66 smallDist = MOTHURMAX; in clear()
140 smallDist = begin()->dist; //set the first candidate small distance in getSmallestCell()
146 if(dist < smallDist){ //found a new smallest distance in getSmallestCell()
148 smallDist = dist; in getSmallestCell()
151 …else if(util.isEqual(dist, smallDist)){ //if a subsequent distance is the same as mins distance a… in getSmallestCell()
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| H A D | sparsedistancematrix.cpp | 14 SparseDistanceMatrix::SparseDistanceMatrix() : numNodes(0), smallDist(MOTHURMAX){ m = MothurOut::g… in SparseDistanceMatrix()
31 return smallDist; in getSmallDist()
84 if(cell.dist < smallDist){ smallDist = cell.dist; } in addCell()
99 if(cell.dist < smallDist){ smallDist = cell.dist; } in addCellSorted()
128 smallDist = MOTHURMAX; in getSmallestCell()
133 if (m->getControl_pressed()) { return smallDist; } in getSmallestCell()
140 if(dist < smallDist){ //found a new smallest distance in getSmallestCell()
142 smallDist = dist; in getSmallestCell()
147 …else if(util.isEqual(dist, smallDist)){ //if a subsequent distance is the same as mins distance a… in getSmallestCell()
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| H A D | distancedb.cpp | 97 float smallDist = 100000; in findClosestSequences() local
102 if (dist < smallDist) { in findClosestSequences()
104 smallDist = dist; in findClosestSequences()
107 searchScore = smallDist; in findClosestSequences()
109 Scores.push_back(smallDist); in findClosestSequences()
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| H A D | sparsematrix.hpp | 39 float smallDist; member in SparseMatrix
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| H A D | sparsedistancematrix.h | 46 float smallDist, aboveCutoff; variable
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| /dports/science/dakota/dakota-6.13.0-release-public.src-UI/packages/external/JEGA/MOGA/src/NichePressureApplicators/ |
| H A D | SpaceFillingNicher.cpp | 482 double smallDist = std::numeric_limits<double>::max(); in ApplyNichePressure() local
494 if(dist < smallDist) smallDist = dist; in ApplyNichePressure()
497 if(smallDist > largeDist) in ApplyNichePressure()
499 largeDist = smallDist; in ApplyNichePressure()
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| /dports/games/aquaria/Aquaria-OSE-v1.002-22-g84366ad/Aquaria/ |
| H A D | AquariaMenuItem.cpp | 176 int smallDist = -1, dist = 0; in updateMovement() local
230 if (smallDist == -1 || dist < smallDist) in updateMovement()
233 smallDist = dist; in updateMovement()
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| /dports/games/criticalmass/CriticalMass-1.5/utils/lzma/SRC/7zip/Compress/LZMA/ |
| H A D | LZMAEncoder.cpp | 1057 static inline bool ChangePair(UInt32 smallDist, UInt32 bigDist) in ChangePair() argument
1060 return (smallDist < (UInt32(1) << (32-kDif)) && bigDist >= (smallDist << kDif)); in ChangePair()
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| /dports/games/libretro-yabause/yabause-ea5b118/yabause/src/libchdr/deps/lzma-16.04/Java/SevenZip/Compression/LZMA/ |
| H A D | Encoder.java | 1030 boolean ChangePair(int smallDist, int bigDist) in ChangePair() argument
1033 return (smallDist < (1 << (32 - kDif)) && bigDist >= (smallDist << kDif)); in ChangePair()
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| /dports/games/libretro-play/Play--3cd0a367b5e24c061a6310c68c9fa7f6b531ebd4/deps/Dependencies/lzmasdk-18.05/Java/SevenZip/Compression/LZMA/ |
| H A D | Encoder.java | 1030 boolean ChangePair(int smallDist, int bigDist) in ChangePair() argument
1033 return (smallDist < (1 << (32 - kDif)) && bigDist >= (smallDist << kDif)); in ChangePair()
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| /dports/www/firefox-esr/firefox-91.8.0/other-licenses/7zstub/src/Java/SevenZip/Compression/LZMA/ |
| H A D | Encoder.java | 1030 boolean ChangePair(int smallDist, int bigDist)
1033 return (smallDist < (1 << (32 - kDif)) && bigDist >= (smallDist << kDif));
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| /dports/emulators/mess/mame-mame0226/3rdparty/lzma/Java/SevenZip/Compression/LZMA/ |
| H A D | Encoder.java | 1030 boolean ChangePair(int smallDist, int bigDist) in ChangePair() argument
1033 return (smallDist < (1 << (32 - kDif)) && bigDist >= (smallDist << kDif)); in ChangePair()
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| /dports/archivers/lzmalib/lzmalib-0.0.1/7zip/Compress/LZMA/ |
| H A D | LZMAEncoder.cpp | 1077 static inline bool ChangePair(UInt32 smallDist, UInt32 bigDist) in ChangePair() argument
1080 return (smallDist < (UInt32(1) << (32-kDif)) && bigDist >= (smallDist << kDif)); in ChangePair()
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| /dports/archivers/lzma/lzma-19.00/Java/SevenZip/Compression/LZMA/ |
| H A D | Encoder.java | 1030 boolean ChangePair(int smallDist, int bigDist) in ChangePair() argument
1033 return (smallDist < (1 << (32 - kDif)) && bigDist >= (smallDist << kDif)); in ChangePair()
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| /dports/emulators/mame/mame-mame0226/3rdparty/lzma/Java/SevenZip/Compression/LZMA/ |
| H A D | Encoder.java | 1030 boolean ChangePair(int smallDist, int bigDist) in ChangePair() argument
1033 return (smallDist < (1 << (32 - kDif)) && bigDist >= (smallDist << kDif)); in ChangePair()
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| /dports/www/firefox/firefox-99.0/other-licenses/7zstub/src/Java/SevenZip/Compression/LZMA/ |
| H A D | Encoder.java | 1030 boolean ChangePair(int smallDist, int bigDist) in ChangePair() argument
1033 return (smallDist < (1 << (32 - kDif)) && bigDist >= (smallDist << kDif)); in ChangePair()
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| /dports/sysutils/squashfs-tools/Java/SevenZip/Compression/LZMA/ |
| H A D | Encoder.java | 1030 boolean ChangePair(int smallDist, int bigDist) in ChangePair() argument
1033 return (smallDist < (1 << (32 - kDif)) && bigDist >= (smallDist << kDif)); in ChangePair()
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| /dports/mail/thunderbird/thunderbird-91.8.0/other-licenses/7zstub/src/Java/SevenZip/Compression/LZMA/ |
| H A D | Encoder.java | 1030 boolean ChangePair(int smallDist, int bigDist) in ChangePair() argument
1033 return (smallDist < (1 << (32 - kDif)) && bigDist >= (smallDist << kDif)); in ChangePair()
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| /dports/lang/spidermonkey60/firefox-60.9.0/other-licenses/7zstub/src/Java/SevenZip/Compression/LZMA/ |
| H A D | Encoder.java | 1030 boolean ChangePair(int smallDist, int bigDist) in ChangePair() argument
1033 return (smallDist < (1 << (32 - kDif)) && bigDist >= (smallDist << kDif)); in ChangePair()
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| /dports/lang/spidermonkey78/firefox-78.9.0/other-licenses/7zstub/src/Java/SevenZip/Compression/LZMA/ |
| H A D | Encoder.java | 1030 boolean ChangePair(int smallDist, int bigDist) in ChangePair() argument
1033 return (smallDist < (1 << (32 - kDif)) && bigDist >= (smallDist << kDif)); in ChangePair()
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| /dports/games/libretro-yabause/yabause-ea5b118/yabause/src/libchdr/deps/lzma-16.04/CS/7zip/Compress/LZMA/ |
| H A D | LzmaEncoder.cs | 1030 bool ChangePair(UInt32 smallDist, UInt32 bigDist) in ChangePair() argument
1033 return (smallDist < ((UInt32)(1) << (32 - kDif)) && bigDist >= (smallDist << kDif)); in ChangePair()
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