/dports/science/ghmm/ghmm-0.9-rc3/ghmmwrapper/ |
H A D | gql.c | 74 smo->M = M; in smodel_alloc_fill() 75 smo->N = N; in smodel_alloc_fill() 78 if (!(smo->s = calloc(sizeof(*(smo->s)), (smo->N)))) in smodel_alloc_fill() 82 ghmm_cstate_alloc(&smo->s[i], smo->M, smo->N, smo->N, cos); in smodel_alloc_fill() 84 return smo; in smodel_alloc_fill() 109 if (smo->s && smo->s[i].out_a && smo->s[j].in_a) { in smodel_set_transition() 134 if (smo->s && smo->s[i].out_a && smo->s[j].in_a) { in smodel_get_transition() 148 if (!smo->s) in smodel_set_mean() 154 smo->s[i].e[m].mean.vec[k] = mu[m*(smo->dim)+k]; in smodel_set_mean() 164 if (!smo->s) in smodel_set_variance() [all …]
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H A D | sclass_change.c | 55 int cp_class_change(ghmm_cmodel *smo, const double* seq, int k, int t) { in cp_class_change() argument 82 int python_class_change( ghmm_cmodel* smo, const double *seq, int k, int t ){ in python_class_change() argument 83 char* ModuleName = smo->class_change->python_module; in python_class_change() 84 char* FunctionName = smo->class_change->python_function; in python_class_change() 198 int executePythonCallback(ghmm_cmodel* smo, const double *seq, int k, int t){ in executePythonCallback() argument 245 void setPythonCallback(ghmm_cmodel *smo, PyObject *py_cb){ in setPythonCallback() argument 247 smo->class_change->get_class = executePythonCallback; in setPythonCallback()
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/dports/science/ghmm/ghmm-0.9-rc3/ghmm/ |
H A D | smodel.c | 355 ARRAY_CALLOC (smo->s, smo->N); in ghmm_cmodel_read_block() 378 if ((smo->prior < 0 || smo->prior > 1) && smo->prior != -1) { in ghmm_cmodel_read_block() 786 if ((*smo)->s) m_free ((*smo)->s); in ghmm_cmodel_free() 839 memcpy(sm2->s[i].c, smo->s[i].c, sizeof(*(smo->s[i].c)) * smo->s[i].M); in ghmm_cmodel_copy() 840 memcpy(sm2->s[i].e, smo->s[i].e, sizeof(*(smo->s[i].e)) * smo->s[i].M); in ghmm_cmodel_copy() 966 if (smo[i]->N != smo[j]->N) { in ghmm_cmodel_check_compatibility() 1479 smo->M, smo->N, (int) smo->s[0].e[0].type, smo->cos); in ghmm_cmodel_print() 1510 smo->M, smo->N, (int) smo->s[0].e[0].type, smo->cos); in ghmm_cmodel_print_oneA() 1941 if (smo->s && smo->s[i].out_a && smo->s[j].in_a) { in ghmm_cmodel_get_transition() 1956 if (smo->s && smo->s[i].out_a && smo->s[j].in_a) { in ghmm_cmodel_check_transition() [all …]
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H A D | sgenerate.c | 185 if (i == smo->N) { in ghmm_sgenerate_extensions() 218 class = smo->class_change->get_class (smo, sq->seq[n], n, t); in ghmm_sgenerate_extensions() 223 pos += smo->dim; in ghmm_sgenerate_extensions() 237 class = smo->class_change->get_class (smo, sq->seq[n], n, t); in ghmm_sgenerate_extensions() 305 class = smo->class_change->get_class (smo, sq->seq[n], n, t); in ghmm_sgenerate_extensions() 311 pos += smo->dim; in ghmm_sgenerate_extensions() 386 if (i == smo->N) { in ghmm_sgenerate_single_ext() 457 if (smo->M == 1) in ghmm_sgenerate_single_ext() 475 ghmm_cmodel_get_random_var(smo, i, m, new_O+(t*smo->dim)); in ghmm_sgenerate_single_ext() 527 if (smo->cos > 1) { in ghmm_sgenerate_next_value() [all …]
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H A D | sfoba.c | 63 alpha_1[i] = smo->s[i].pi * ghmm_cmodel_calc_b(smo->s+i, omega); in sfoba_initforward() 69 alpha_1[i] = smo->s[i].pi * b[i][smo->M]; in sfoba_initforward() 108 T /= smo->dim; in ghmm_cmodel_forward() 122 if (smo->cos == 1) { in ghmm_cmodel_forward() 131 osc = smo->class_change->get_class (smo, O, smo->class_change->k, t); in ghmm_cmodel_forward() 179 osc = smo->class_change->get_class (smo, O, smo->class_change->k, t); in ghmm_cmodel_forward() 215 T /= smo->dim; in ghmm_cmodel_backward() 236 if (smo->cos == 1) { in ghmm_cmodel_backward() 244 osc = smo->class_change->get_class (smo, O, smo->class_change->k, T - 2); in ghmm_cmodel_backward() 261 * ghmm_cmodel_calc_b(smo->s+j_id, O+pos+smo->dim) in ghmm_cmodel_backward() [all …]
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H A D | sreestimate.c | 104 r->cos = smo->cos; in sreestimate_alloc() 114 r->a_denom = ighmm_cmatrix_stat_alloc (smo->N, smo->cos); in sreestimate_alloc() 122 r->c_num = ighmm_cmatrix_stat_alloc (smo->N, smo->M); in sreestimate_alloc() 133 r->mue_num[i] = ighmm_cmatrix_stat_alloc(smo->s[i].M, smo->dim); in sreestimate_alloc() 145 r->u_num[i] = ighmm_cmatrix_stat_alloc(smo->s[i].M, smo->dim * smo->dim); in sreestimate_alloc() 151 r->mue_u_denom = ighmm_cmatrix_stat_alloc (smo->N, smo->M); in sreestimate_alloc() 156 r->sum_gt_otot = ighmm_cmatrix_stat_alloc (smo->N, smo->M); in sreestimate_alloc() 207 int dim_2 = smo->dim * smo->dim; in sreestimate_init() 400 smo->s[j_id].in_a[osc][l] = smo->s[i].out_a[osc][j]; in sreestimate_setlambda() 501 smo->dim, smo->s[i].e[m].variance.mat); in sreestimate_setlambda() [all …]
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H A D | sviterbi.c | 70 ARRAY_CALLOC (v->phi, smo->N); in sviterbi_alloc() 79 sviterbi_free (&v, smo->N, T); in sviterbi_alloc() 114 pos = t * smo->dim; in sviterbi_precompute() 138 T /= smo->dim; in ghmm_cmodel_viterbi() 140 v = sviterbi_alloc (smo, T); in ghmm_cmodel_viterbi() 150 for (j = 0; j < smo->N; j++) { in ghmm_cmodel_viterbi() 159 if (smo->cos == 1) { in ghmm_cmodel_viterbi() 168 osc = smo->class_change->get_class (smo, O, smo->class_change->k, t - 1); in ghmm_cmodel_viterbi() 169 if (osc >= smo->cos){ in ghmm_cmodel_viterbi() 184 value = v->phi[smo->s[j].in_id[i]] + log (smo->s[j].in_a[osc][i]); in ghmm_cmodel_viterbi() [all …]
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H A D | smodel.h | 213 int ghmm_cmodel_class_change_alloc (ghmm_cmodel * smo); 247 int ghmm_cmodel_free (ghmm_cmodel ** smo); 253 ghmm_cmodel *ghmm_cmodel_copy (const ghmm_cmodel * smo); 261 int ghmm_cmodel_check (const ghmm_cmodel * smo); 302 ghmm_cseq *ghmm_cmodel_generate_sequences (ghmm_cmodel * smo, int seed, 349 void ghmm_cmodel_print (FILE * file, ghmm_cmodel * smo); 356 void ghmm_cmodel_print_oneA (FILE * file, ghmm_cmodel * smo); 389 void ghmm_cmodel_Mue_print (FILE * file, ghmm_cmodel * smo, char *tab, 419 void ghmm_cmodel_fix_print (FILE * file, ghmm_cmodel * smo, char *tab, 480 int ghmm_cmodel_count_free_parameter (ghmm_cmodel ** smo, int smo_number); [all …]
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H A D | smixturehmm.c | 77 ghmm_cmodel **smo_initial = NULL, **smo = NULL; 162 ARRAY_CALLOC (smo, total_smo_number); 224 smo[k] = ghmm_cmodel_copy (smo_initial[k]); 225 if (!smo[k]) { 290 ghmm_cmodel_print (smofile, smo[k]); 304 (smo, smo_number, sqd_train, &train_likelihood); 350 ghmm_cmodel_free (&(smo[k])); 406 smo[k]->prior = sum / total_train_w; in ghmm_smixturehmm_cluster() 417 smo_sqd->smo = smo[k]; in ghmm_smixturehmm_cluster() 431 smo[k]->prior = model_weight / total_train_w; in ghmm_smixturehmm_cluster() [all …]
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H A D | smixturehmm.h | 58 ghmm_cmodel ** smo, int smo_number); 62 double smixturehmm_like (ghmm_cmodel ** smo, int smo_number, 67 int ghmm_smixturehmm_init (double **cp, ghmm_cseq * sqd, ghmm_cmodel ** smo, 72 int smixturehmm_calc_priors (double **cp, ghmm_cseq * sqd, ghmm_cmodel ** smo, 77 int ghmm_smixturehmm_calc_cp (double **cp, ghmm_cseq * sqd, ghmm_cmodel ** smo, 83 ghmm_cmodel ** smo, int smo_number); 93 ghmm_cmodel ** smo, int smo_number);
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H A D | smap_classify.c | 141 int ghmm_smap_classify (ghmm_cmodel ** smo, double *result, int smo_number, in ghmm_smap_classify() argument 150 if (smo == NULL || smo_number <= 0 || O == NULL || T < 0) { in ghmm_smap_classify() 155 map = smap_classify_alloc (smo_number, smo[0]->N, T); in ghmm_smap_classify() 159 if (smo[m]->prior == -1) in ghmm_smap_classify() 162 map->prior[m] = smo[m]->prior; in ghmm_smap_classify() 178 if (ghmm_cmodel_forward (smo[m], O, T, NULL, map->alpha[m], map->scale[m], in ghmm_smap_classify() 186 for (n = 0; n < smo[0]->N; n++) in ghmm_smap_classify() 268 if (smo == NULL || smo_number <= 0 || O == NULL || T < 0) { in ghmm_smap_bayes() 275 if (smo[m]->prior == -1) in ghmm_smap_bayes() 278 prior[m] = smo[m]->prior; in ghmm_smap_bayes() [all …]
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/dports/math/R/R-4.1.2/src/library/stats/R/ |
H A D | smooth.R | 35 smo <- .Call(C_Rsm, as.double(x), type, iend) functionVar 39 r <- smooth(x - smo$y, kind = kind, twiceit = FALSE, 41 smo$y <- smo$y + r 42 if(!is.null(smo$iter)) 43 smo$iter <- smo$iter + attr(r, "iter") 44 if(!is.null(smo$changed)) 45 smo$changed <- smo$changed || attr(r,"changed") 48 smo$y <- ts(smo$y, start=start(x), frequency=frequency(x)) 50 structure(smo$y, kind = kind, twiced = twiceit, 51 iter = smo$iter, changed = smo$changed,
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/dports/math/libRmath/R-4.1.1/src/library/stats/R/ |
H A D | smooth.R | 35 smo <- .Call(C_Rsm, as.double(x), type, iend) functionVar 39 r <- smooth(x - smo$y, kind = kind, twiceit = FALSE, 41 smo$y <- smo$y + r 42 if(!is.null(smo$iter)) 43 smo$iter <- smo$iter + attr(r, "iter") 44 if(!is.null(smo$changed)) 45 smo$changed <- smo$changed || attr(r,"changed") 48 smo$y <- ts(smo$y, start=start(x), frequency=frequency(x)) 50 structure(smo$y, kind = kind, twiced = twiceit, 51 iter = smo$iter, changed = smo$changed,
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/dports/misc/lifelines/lifelines-3.1.1/src/gedlib/ |
H A D | dateprint.c | 391 if (smo) { in format_ymd() 412 if (smo) in format_ymd() 425 if (smo) in format_ymd() 432 if (smo) in format_ymd() 445 if (smo) in format_ymd() 452 if (smo) in format_ymd() 462 if (smo) in format_ymd() 483 if (smo) in format_ymd() 493 if (smo) in format_ymd() 502 if (smo) in format_ymd() [all …]
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/dports/finance/xtrader/xtrader-0.99.9_10/util/ |
H A D | MHDate.cpp | 402 if (*smo == "Jan") in ParseString() 404 else if (*smo == "Feb") in ParseString() 406 else if (*smo == "Mar") in ParseString() 408 else if (*smo == "Apr") in ParseString() 410 else if (*smo == "May") in ParseString() 412 else if (*smo == "Jun") in ParseString() 414 else if (*smo == "Jul") in ParseString() 416 else if (*smo == "Aug") in ParseString() 418 else if (*smo == "Sep") in ParseString() 420 else if (*smo == "Oct") in ParseString() [all …]
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/dports/science/ghmm/ghmm-0.9-rc3/tools/ |
H A D | smix_hmm.c | 31 ghmm_cmodel **smo = NULL; in smix_hmm_run() local 40 smo = ghmm_cmodel_read(argv[2], &smo_number); in smix_hmm_run() 41 if (!smo) {GHMM_LOG_QUEUED(LCONVERTED); goto STOP;} in smix_hmm_run() 57 if (ghmm_smixturehmm_init(cp, sqd[0], smo, smo_number, 5) == -1) { in smix_hmm_run() 61 if (ghmm_smixturehmm_cluster(outfile, cp, sqd[0], smo, smo_number) == -1) { in smix_hmm_run() 67 ghmm_cmodel_print(outfile, smo[k]); in smix_hmm_run()
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H A D | smo2xml.c | 16 ghmm_cmodel ** smo; in main() local 26 smo = ghmm_cmodel_read(docname, &mo_number); in main() 31 if (smo) { in main() 33 ghmm_cmodel_xml_write(smo, writename, mo_number); in main()
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/dports/math/R-cran-acepack/acepack/src/ |
H A D | avas.f | 331 smo(i)=sm 378 160 if (smo(j+1).ne.smo(j)) go to 170 384 if (j0.gt.1) a=0.5*(smo(j0)-smo(j0-1)) 386 if (j.lt.n) b=0.5*(smo(j+1)-smo(j)) 391 smo(i)=smo(i)-a+d*(i-j0) 398 sm=smo(j) 402 sm=sm+smo(j) 407 smo(i)=sm 609 smo(j)=a 737 sy=smo(j)*w(j) [all …]
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/dports/misc/rump/buildrump.sh-b914579/src/external/cddl/osnet/dist/uts/common/fs/zfs/ |
H A D | space_map.c | 273 space_map_obj_t *smo, objset_t *os) in space_map_load() argument 285 end = smo->smo_objsize; in space_map_load() 286 space = smo->smo_alloc; in space_map_load() 423 smo->smo_alloc += sm->sm_space; in space_map_sync() 425 smo->smo_alloc -= sm->sm_space; in space_map_sync() 450 dmu_write(os, smo->smo_object, smo->smo_objsize, in space_map_sync() 453 smo->smo_objsize += bufsize; in space_map_sync() 470 dmu_write(os, smo->smo_object, smo->smo_objsize, in space_map_sync() 473 smo->smo_objsize += size; in space_map_sync() 486 smo->smo_objsize = 0; in space_map_truncate() [all …]
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/dports/comms/wsjtz/wsjtx/lib/ |
H A D | sync9.f90 | 9 real smo(-5:25) local 70 smo(0:20)=1.0/21.0 71 smo(-5:-1)=-(1.0/21.0)*(21.0/10.0) 72 smo(21:25)=smo(-5) 77 if(i+j.ge.1 .and. i+j.lt.NSMAX) sm=sm + smo(j)*savg(i+j)
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/dports/java/openjdk11/jdk11u-jdk-11.0.13-8-1/src/java.management/share/classes/javax/management/monitor/ |
H A D | StringMonitor.java | 160 final StringMonitorObservedObject smo = in start() local 162 smo.setStatus(MATCHING_OR_DIFFERING); in start() 280 final StringMonitorObservedObject smo = in setStringToCompare() local 282 smo.setStatus(MATCHING_OR_DIFFERING); in setStringToCompare() 363 final StringMonitorObservedObject smo = in createObservedObject() local 365 smo.setStatus(MATCHING_OR_DIFFERING); in createObservedObject() 366 return smo; in createObservedObject()
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/dports/java/openjdk13/jdk13u-jdk-13.0.10-1-1/src/java.management/share/classes/javax/management/monitor/ |
H A D | StringMonitor.java | 160 final StringMonitorObservedObject smo = in start() local 162 smo.setStatus(MATCHING_OR_DIFFERING); in start() 280 final StringMonitorObservedObject smo = in setStringToCompare() local 282 smo.setStatus(MATCHING_OR_DIFFERING); in setStringToCompare() 363 final StringMonitorObservedObject smo = in createObservedObject() local 365 smo.setStatus(MATCHING_OR_DIFFERING); in createObservedObject() 366 return smo; in createObservedObject()
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/dports/java/openjdk11-jre/jdk11u-jdk-11.0.13-8-1/src/java.management/share/classes/javax/management/monitor/ |
H A D | StringMonitor.java | 160 final StringMonitorObservedObject smo = in start() local 162 smo.setStatus(MATCHING_OR_DIFFERING); in start() 280 final StringMonitorObservedObject smo = in setStringToCompare() local 282 smo.setStatus(MATCHING_OR_DIFFERING); in setStringToCompare() 363 final StringMonitorObservedObject smo = in createObservedObject() local 365 smo.setStatus(MATCHING_OR_DIFFERING); in createObservedObject() 366 return smo; in createObservedObject()
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/dports/java/openjdk8/jdk8u-jdk8u312-b07.1/jdk/src/share/classes/javax/management/monitor/ |
H A D | StringMonitor.java | 161 final StringMonitorObservedObject smo = in start() local 163 smo.setStatus(MATCHING_OR_DIFFERING); in start() 281 final StringMonitorObservedObject smo = in setStringToCompare() local 283 smo.setStatus(MATCHING_OR_DIFFERING); in setStringToCompare() 364 final StringMonitorObservedObject smo = in createObservedObject() local 366 smo.setStatus(MATCHING_OR_DIFFERING); in createObservedObject() 367 return smo; in createObservedObject()
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/dports/java/openjdk16/jdk16u-jdk-16.0.2-7-1/src/java.management/share/classes/javax/management/monitor/ |
H A D | StringMonitor.java | 160 final StringMonitorObservedObject smo = in start() local 162 smo.setStatus(MATCHING_OR_DIFFERING); in start() 280 final StringMonitorObservedObject smo = in setStringToCompare() local 282 smo.setStatus(MATCHING_OR_DIFFERING); in setStringToCompare() 363 final StringMonitorObservedObject smo = in createObservedObject() local 365 smo.setStatus(MATCHING_OR_DIFFERING); in createObservedObject() 366 return smo; in createObservedObject()
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