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Searched refs:snp (Results 1 – 25 of 1165) sorted by relevance

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/dports/emulators/qemu5/qemu-5.2.0/roms/ipxe/src/drivers/net/efi/
H A Dsnpnet.c174 if ( ( efirc = snp->snp->Transmit ( snp->snp, 0, iob_len ( iobuf ), in snpnet_transmit()
202 if ( ( efirc = snp->snp->GetStatus ( snp->snp, &irq, &txbuf ) ) != 0 ) { in snpnet_poll_tx()
254 if ( ( efirc = snp->snp->Receive ( snp->snp, NULL, &len, in snpnet_poll_rx()
322 efirc = snp->snp->ReceiveFilters ( snp->snp, filters[i], in snpnet_rx_filters()
362 if ( ( efirc = snp->snp->Initialize ( snp->snp, in snpnet_open()
391 if ( ( efirc = snp->snp->Shutdown ( snp->snp ) ) != 0 ) { in snpnet_open()
430 if ( ( efirc = snp->snp->Shutdown ( snp->snp ) ) != 0 ) { in snpnet_close()
511 ( ( efirc = snp->snp->Start ( snp->snp ) ) != 0 ) ) { in snpnet_start()
518 ( ( efirc = snp->snp->Shutdown ( snp->snp ) ) != 0 ) ) { in snpnet_start()
542 snp->mtu = ( snp->snp->Mode->MaxPacketSize + in snpnet_start()
[all …]
/dports/net/ipxe/ipxe-2265a65/src/drivers/net/efi/
H A Dsnpnet.c174 if ( ( efirc = snp->snp->Transmit ( snp->snp, 0, iob_len ( iobuf ), in snpnet_transmit()
202 if ( ( efirc = snp->snp->GetStatus ( snp->snp, &irq, &txbuf ) ) != 0 ) { in snpnet_poll_tx()
254 if ( ( efirc = snp->snp->Receive ( snp->snp, NULL, &len, in snpnet_poll_rx()
322 efirc = snp->snp->ReceiveFilters ( snp->snp, filters[i], in snpnet_rx_filters()
362 if ( ( efirc = snp->snp->Initialize ( snp->snp, in snpnet_open()
391 if ( ( efirc = snp->snp->Shutdown ( snp->snp ) ) != 0 ) { in snpnet_open()
430 if ( ( efirc = snp->snp->Shutdown ( snp->snp ) ) != 0 ) { in snpnet_close()
511 ( ( efirc = snp->snp->Start ( snp->snp ) ) != 0 ) ) { in snpnet_start()
518 ( ( efirc = snp->snp->Shutdown ( snp->snp ) ) != 0 ) ) { in snpnet_start()
542 snp->mtu = ( snp->snp->Mode->MaxPacketSize + in snpnet_start()
[all …]
/dports/emulators/qemu/qemu-6.2.0/roms/ipxe/src/drivers/net/efi/
H A Dsnpnet.c174 if ( ( efirc = snp->snp->Transmit ( snp->snp, 0, iob_len ( iobuf ), in snpnet_transmit()
202 if ( ( efirc = snp->snp->GetStatus ( snp->snp, &irq, &txbuf ) ) != 0 ) { in snpnet_poll_tx()
254 if ( ( efirc = snp->snp->Receive ( snp->snp, NULL, &len, in snpnet_poll_rx()
322 efirc = snp->snp->ReceiveFilters ( snp->snp, filters[i], in snpnet_rx_filters()
362 if ( ( efirc = snp->snp->Initialize ( snp->snp, in snpnet_open()
391 if ( ( efirc = snp->snp->Shutdown ( snp->snp ) ) != 0 ) { in snpnet_open()
430 if ( ( efirc = snp->snp->Shutdown ( snp->snp ) ) != 0 ) { in snpnet_close()
511 ( ( efirc = snp->snp->Start ( snp->snp ) ) != 0 ) ) { in snpnet_start()
518 ( ( efirc = snp->snp->Shutdown ( snp->snp ) ) != 0 ) ) { in snpnet_start()
542 snp->mtu = ( snp->snp->Mode->MaxPacketSize + in snpnet_start()
[all …]
/dports/emulators/qemu60/qemu-6.0.0/roms/ipxe/src/drivers/net/efi/
H A Dsnpnet.c174 if ( ( efirc = snp->snp->Transmit ( snp->snp, 0, iob_len ( iobuf ), in snpnet_transmit()
202 if ( ( efirc = snp->snp->GetStatus ( snp->snp, &irq, &txbuf ) ) != 0 ) { in snpnet_poll_tx()
254 if ( ( efirc = snp->snp->Receive ( snp->snp, NULL, &len, in snpnet_poll_rx()
322 efirc = snp->snp->ReceiveFilters ( snp->snp, filters[i], in snpnet_rx_filters()
362 if ( ( efirc = snp->snp->Initialize ( snp->snp, in snpnet_open()
391 if ( ( efirc = snp->snp->Shutdown ( snp->snp ) ) != 0 ) { in snpnet_open()
430 if ( ( efirc = snp->snp->Shutdown ( snp->snp ) ) != 0 ) { in snpnet_close()
511 ( ( efirc = snp->snp->Start ( snp->snp ) ) != 0 ) ) { in snpnet_start()
518 ( ( efirc = snp->snp->Shutdown ( snp->snp ) ) != 0 ) ) { in snpnet_start()
542 snp->mtu = ( snp->snp->Mode->MaxPacketSize + in snpnet_start()
[all …]
/dports/net/cjdns/cjdns-cjdns-v21.1/subnode/
H A DSupernodeHunter.c131 struct SupernodeHunter_pvt* snp = Identity_check(q->snp); in adoptSupernode2() local
163 snp->pub.onSnodeChange(&snp->pub, q->sendTime, *snodeRecvTime); in adoptSupernode2()
174 q->snp = snp; in adoptSupernode()
195 struct SupernodeHunter_pvt* snp = Identity_check(q->snp); in updateSnodePath2() local
229 snp->pub.onSnodeChange(&snp->pub, q->sendTime, *snodeRecvTime); in updateSnodePath2()
238 q->snp = snp; in updateSnodePath()
312 snp->nextPeer >= snp->myPeerAddrs->length && in peerResponseOK()
326 adoptSupernode(snp, &snp->snodeCandidate); in peerResponseOK()
383 if (snp->pub.snodeIsReachable && !snp->snodePathUpdated) { in probePeerCycle()
395 adoptSupernode(snp, snp->myAddress); in probePeerCycle()
[all …]
/dports/emulators/qemu42/qemu-4.2.1/roms/ipxe/src/drivers/net/efi/
H A Dsnpnet.c167 if ( ( efirc = snp->snp->Transmit ( snp->snp, 0, iob_len ( iobuf ), in snpnet_transmit()
195 if ( ( efirc = snp->snp->GetStatus ( snp->snp, &irq, &txbuf ) ) != 0 ) { in snpnet_poll_tx()
247 if ( ( efirc = snp->snp->Receive ( snp->snp, NULL, &len, in snpnet_poll_rx()
312 efirc = snp->snp->ReceiveFilters ( snp->snp, filters[i], in snpnet_rx_filters()
338 if ( ( efirc = snp->snp->StationAddress ( snp->snp, FALSE, mac ) ) !=0){ in snpnet_open()
346 if ( ( efirc = snp->snp->Initialize ( snp->snp, 0, 0 ) ) != 0 ) { in snpnet_open()
384 if ( ( efirc = snp->snp->Shutdown ( snp->snp ) ) != 0 ) { in snpnet_close()
465 ( ( efirc = snp->snp->Start ( snp->snp ) ) != 0 ) ) { in snpnet_start()
472 ( ( efirc = snp->snp->Shutdown ( snp->snp ) ) != 0 ) ) { in snpnet_start()
496 snp->mtu = ( snp->snp->Mode->MaxPacketSize + in snpnet_start()
[all …]
/dports/emulators/qemu-powernv/qemu-powernv-3.0.50/roms/ipxe/src/drivers/net/efi/
H A Dsnpnet.c167 if ( ( efirc = snp->snp->Transmit ( snp->snp, 0, iob_len ( iobuf ), in snpnet_transmit()
195 if ( ( efirc = snp->snp->GetStatus ( snp->snp, &irq, &txbuf ) ) != 0 ) { in snpnet_poll_tx()
247 if ( ( efirc = snp->snp->Receive ( snp->snp, NULL, &len, in snpnet_poll_rx()
312 efirc = snp->snp->ReceiveFilters ( snp->snp, filters[i], in snpnet_rx_filters()
338 if ( ( efirc = snp->snp->StationAddress ( snp->snp, FALSE, mac ) ) !=0){ in snpnet_open()
346 if ( ( efirc = snp->snp->Initialize ( snp->snp, 0, 0 ) ) != 0 ) { in snpnet_open()
384 if ( ( efirc = snp->snp->Shutdown ( snp->snp ) ) != 0 ) { in snpnet_close()
465 ( ( efirc = snp->snp->Start ( snp->snp ) ) != 0 ) ) { in snpnet_start()
472 ( ( efirc = snp->snp->Shutdown ( snp->snp ) ) != 0 ) ) { in snpnet_start()
496 snp->mtu = ( snp->snp->Mode->MaxPacketSize + in snpnet_start()
[all …]
/dports/emulators/qemu-utils/qemu-4.2.1/roms/ipxe/src/drivers/net/efi/
H A Dsnpnet.c167 if ( ( efirc = snp->snp->Transmit ( snp->snp, 0, iob_len ( iobuf ), in snpnet_transmit()
195 if ( ( efirc = snp->snp->GetStatus ( snp->snp, &irq, &txbuf ) ) != 0 ) { in snpnet_poll_tx()
247 if ( ( efirc = snp->snp->Receive ( snp->snp, NULL, &len, in snpnet_poll_rx()
312 efirc = snp->snp->ReceiveFilters ( snp->snp, filters[i], in snpnet_rx_filters()
338 if ( ( efirc = snp->snp->StationAddress ( snp->snp, FALSE, mac ) ) !=0){ in snpnet_open()
346 if ( ( efirc = snp->snp->Initialize ( snp->snp, 0, 0 ) ) != 0 ) { in snpnet_open()
384 if ( ( efirc = snp->snp->Shutdown ( snp->snp ) ) != 0 ) { in snpnet_close()
465 ( ( efirc = snp->snp->Start ( snp->snp ) ) != 0 ) ) { in snpnet_start()
472 ( ( efirc = snp->snp->Shutdown ( snp->snp ) ) != 0 ) ) { in snpnet_start()
496 snp->mtu = ( snp->snp->Mode->MaxPacketSize + in snpnet_start()
[all …]
/dports/emulators/qemu-guest-agent/qemu-5.0.1/roms/ipxe/src/drivers/net/efi/
H A Dsnpnet.c167 if ( ( efirc = snp->snp->Transmit ( snp->snp, 0, iob_len ( iobuf ), in snpnet_transmit()
195 if ( ( efirc = snp->snp->GetStatus ( snp->snp, &irq, &txbuf ) ) != 0 ) { in snpnet_poll_tx()
247 if ( ( efirc = snp->snp->Receive ( snp->snp, NULL, &len, in snpnet_poll_rx()
312 efirc = snp->snp->ReceiveFilters ( snp->snp, filters[i], in snpnet_rx_filters()
338 if ( ( efirc = snp->snp->StationAddress ( snp->snp, FALSE, mac ) ) !=0){ in snpnet_open()
346 if ( ( efirc = snp->snp->Initialize ( snp->snp, 0, 0 ) ) != 0 ) { in snpnet_open()
384 if ( ( efirc = snp->snp->Shutdown ( snp->snp ) ) != 0 ) { in snpnet_close()
465 ( ( efirc = snp->snp->Start ( snp->snp ) ) != 0 ) ) { in snpnet_start()
472 ( ( efirc = snp->snp->Shutdown ( snp->snp ) ) != 0 ) ) { in snpnet_start()
496 snp->mtu = ( snp->snp->Mode->MaxPacketSize + in snpnet_start()
[all …]
/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/bs_tools/tests/
H A Dsnps_se_0.vcf20 21 272 snp A G 46 PASS FB:9,0,7,0;RB=6,0,1,0; GT:DP:GS:MP 0|1:23:42.9813:1
21 21 364 snp G A 46 PASS FB:6,0,12,0;RB=11,0,0,0; GT:DP:GS:MP 0|1:29:36.4644:1
22 21 644 snp C T 46 PASS FB:0,1,0,11;RB=0,4,0,5; GT:DP:GS:MP 0|1:21:33.4912:1
24 21 1032 snp T G 46 PASS FB:0,0,6,4;RB=2,0,1,3; GT:DP:GS:MP 0|1:16:31.4388:1
25 21 1152 snp T A 46 PASS FB:9,0,0,4;RB=9,0,0,6; GT:DP:GS:MP 0|1:28:56.2163:1
26 21 1379 snp T A 46 PASS FB:3,0,0,3;RB=9,0,0,8; GT:DP:GS:MP 0|1:23:24.3217:1
29 21 1637 snp C T 46 PASS FB:0,0,0,8;RB=0,7,0,6; GT:DP:GS:MP 0|1:22:39.9263:1
30 21 1752 snp T G 46 PASS FB:0,0,5,2;RB=3,0,0,2; GT:DP:GS:MP 0|1:12:23.7543:1
33 21 2183 snp T A 46 PASS FB:4,0,0,7;RB=5,0,0,2; GT:DP:GS:MP 0|1:18:23.8161:1
34 21 2419 snp T G 46 PASS FB:0,0,3,4;RB=1,0,0,4; GT:DP:GS:MP 0|1:12:18.042:1
[all …]
H A Dsnps_se_1.vcf20 21 272 snp A G 46 PASS FB:9,0,7,0;RB=6,0,1,0; GT:DP:GS:MP 0|1:23:42.9813:1
21 21 364 snp G A 46 PASS FB:6,0,12,0;RB=11,0,0,0; GT:DP:GS:MP 0|1:29:36.4644:1
22 21 644 snp C T 46 PASS FB:0,1,0,11;RB=0,4,0,5; GT:DP:GS:MP 0|1:21:33.4912:1
24 21 1032 snp T G 46 PASS FB:0,0,6,4;RB=2,0,1,3; GT:DP:GS:MP 0|1:16:31.4388:1
25 21 1152 snp T A 46 PASS FB:9,0,0,4;RB=9,0,0,6; GT:DP:GS:MP 0|1:28:56.2163:1
26 21 1379 snp T A 46 PASS FB:3,0,0,3;RB=9,0,0,8; GT:DP:GS:MP 0|1:23:24.3217:1
29 21 1637 snp C T 46 PASS FB:0,0,0,8;RB=0,7,0,6; GT:DP:GS:MP 0|1:22:39.9263:1
30 21 1752 snp T G 46 PASS FB:0,0,5,2;RB=3,0,0,2; GT:DP:GS:MP 0|1:12:23.7543:1
33 21 2183 snp T A 46 PASS FB:4,0,0,7;RB=5,0,0,2; GT:DP:GS:MP 0|1:18:23.8161:1
34 21 2419 snp T G 46 PASS FB:0,0,3,4;RB=1,0,0,4; GT:DP:GS:MP 0|1:12:18.042:1
[all …]
H A Dsnps_pe_0.vcf20 21 364 snp G A,A 46 PASS FB:15,0,0,0;RB=8,0,0,0; GT:DP:GS:MP 1|2:23:7.40748:0.999394
21 21 993 snp C A,A 46 PASS FB:7,0,0,0;RB=10,0,0,0; GT:DP:GS:MP 1|2:17:9.4659:0.999922
22 21 1379 snp T A,A 46 PASS FB:10,0,0,0;RB=9,0,0,0; GT:DP:GS:MP 1|2:19:10.1707:0.999952
23 21 2129 snp G T,T 46 PASS FB:0,0,0,11;RB=0,0,0,17; GT:DP:GS:MP 1|2:29:16.3973:1
30 21 5061 snp T G,G 46 PASS FB:0,0,16,0;RB=10,0,0,0; GT:DP:GS:MP 1|2:26:15.0189:1
33 21 6635 snp C A,A 46 PASS FB:8,0,0,0;RB=9,0,0,0; GT:DP:GS:MP 1|2:17:10.158:0.999961
38 21 7518 snp C A,A 46 PASS FB:9,0,0,0;RB=7,0,0,0; GT:DP:GS:MP 1|2:16:10.8492:0.99998
72 21 16843 snp C A,A 46 PASS FB:15,0,0,0;RB=8,0,0,0; GT:DP:GS:MP 1|2:23:15.0084:1
90 21 22168 snp G T,T 46 PASS FB:0,0,0,10;RB=0,0,0,15; GT:DP:GS:MP 1|2:25:15.0103:1
94 21 23536 snp G C,C 46 PASS FB:0,11,0,0;RB=0,10,0,0; GT:DP:GS:MP 1|2:21:19.1552:1
[all …]
/dports/lang/racket/racket-8.3/share/pkgs/slideshow-lib/slideshow/private/
H A Dpict-box-lib.rkt7 (provide get-snp/poss
10 (struct snp/pos (snp x y))
13 (define-struct snp/pos (snp x y))
15 ;; get-snip/poss : editor-snip -> (listof snp/pos)
17 (define (get-snp/poss es)
25 (cons (make-snp/pos real-snip x y)
29 (cons (make-snp/pos snip x y)
36 …(with-syntax ([(subpicts ...) (map (lambda (snp/pos) (send (snp/pos-snp snp/pos) read-special #f 0…
38 [(ids ...) (generate-ids "snip-id" (map snp/pos-snp snp/poss))]
39 [(x ...) (map snp/pos-x snp/poss)]
[all …]
/dports/devel/sunpromake/schily-2021-09-18/sccs/sccs/lib/comobj/src/
H A Dauxf.c64 register char *snp; local
70 snp = sname(sfile);
76 strlcpy(auxfile, &snp[2], sizeof (auxfile));
85 strlcpy(auxfile, snp, sizeof (auxfile));
95 if ((snp-sfile) >= sizeof (auxfile))
98 auxfile[snp-sfile] = '\0';
100 strlcat(auxfile, snp, sizeof (auxfile));
109 if ((snp-sfile) >= sizeof (auxfile))
112 auxfile[snp-sfile] = '\0';
118 if ((snp-sfile) >= sizeof (auxfile))
[all …]
/dports/devel/smake/schily-2021-09-18/sccs/sccs/lib/comobj/src/
H A Dauxf.c64 register char *snp; local
70 snp = sname(sfile);
76 strlcpy(auxfile, &snp[2], sizeof (auxfile));
85 strlcpy(auxfile, snp, sizeof (auxfile));
95 if ((snp-sfile) >= sizeof (auxfile))
98 auxfile[snp-sfile] = '\0';
100 strlcat(auxfile, snp, sizeof (auxfile));
109 if ((snp-sfile) >= sizeof (auxfile))
112 auxfile[snp-sfile] = '\0';
118 if ((snp-sfile) >= sizeof (auxfile))
[all …]
/dports/devel/sccs/schily-2021-09-18/sccs/sccs/lib/comobj/src/
H A Dauxf.c64 register char *snp; local
70 snp = sname(sfile);
76 strlcpy(auxfile, &snp[2], sizeof (auxfile));
85 strlcpy(auxfile, snp, sizeof (auxfile));
95 if ((snp-sfile) >= sizeof (auxfile))
98 auxfile[snp-sfile] = '\0';
100 strlcat(auxfile, snp, sizeof (auxfile));
109 if ((snp-sfile) >= sizeof (auxfile))
112 auxfile[snp-sfile] = '\0';
118 if ((snp-sfile) >= sizeof (auxfile))
[all …]
/dports/devel/schilybase/schily-2021-09-18/sccs/sccs/lib/comobj/src/
H A Dauxf.c64 register char *snp; local
70 snp = sname(sfile);
76 strlcpy(auxfile, &snp[2], sizeof (auxfile));
85 strlcpy(auxfile, snp, sizeof (auxfile));
95 if ((snp-sfile) >= sizeof (auxfile))
98 auxfile[snp-sfile] = '\0';
100 strlcat(auxfile, snp, sizeof (auxfile));
109 if ((snp-sfile) >= sizeof (auxfile))
112 auxfile[snp-sfile] = '\0';
118 if ((snp-sfile) >= sizeof (auxfile))
[all …]
/dports/net/rscsi/schily-2021-09-18/sccs/sccs/lib/comobj/src/
H A Dauxf.c64 register char *snp; local
70 snp = sname(sfile);
76 strlcpy(auxfile, &snp[2], sizeof (auxfile));
85 strlcpy(auxfile, snp, sizeof (auxfile));
95 if ((snp-sfile) >= sizeof (auxfile))
98 auxfile[snp-sfile] = '\0';
100 strlcat(auxfile, snp, sizeof (auxfile));
109 if ((snp-sfile) >= sizeof (auxfile))
112 auxfile[snp-sfile] = '\0';
118 if ((snp-sfile) >= sizeof (auxfile))
[all …]
/dports/archivers/star/schily-2021-09-18/sccs/sccs/lib/comobj/src/
H A Dauxf.c64 register char *snp; local
70 snp = sname(sfile);
76 strlcpy(auxfile, &snp[2], sizeof (auxfile));
85 strlcpy(auxfile, snp, sizeof (auxfile));
95 if ((snp-sfile) >= sizeof (auxfile))
98 auxfile[snp-sfile] = '\0';
100 strlcat(auxfile, snp, sizeof (auxfile));
109 if ((snp-sfile) >= sizeof (auxfile))
112 auxfile[snp-sfile] = '\0';
118 if ((snp-sfile) >= sizeof (auxfile))
[all …]
/dports/sysutils/cdrtools/schily-2021-09-18/sccs/sccs/lib/comobj/src/
H A Dauxf.c64 register char *snp; local
70 snp = sname(sfile);
76 strlcpy(auxfile, &snp[2], sizeof (auxfile));
85 strlcpy(auxfile, snp, sizeof (auxfile));
95 if ((snp-sfile) >= sizeof (auxfile))
98 auxfile[snp-sfile] = '\0';
100 strlcat(auxfile, snp, sizeof (auxfile));
109 if ((snp-sfile) >= sizeof (auxfile))
112 auxfile[snp-sfile] = '\0';
118 if ((snp-sfile) >= sizeof (auxfile))
[all …]
/dports/editors/ved/schily-2021-09-18/sccs/sccs/lib/comobj/src/
H A Dauxf.c64 register char *snp; local
70 snp = sname(sfile);
76 strlcpy(auxfile, &snp[2], sizeof (auxfile));
85 strlcpy(auxfile, snp, sizeof (auxfile));
95 if ((snp-sfile) >= sizeof (auxfile))
98 auxfile[snp-sfile] = '\0';
100 strlcat(auxfile, snp, sizeof (auxfile));
109 if ((snp-sfile) >= sizeof (auxfile))
112 auxfile[snp-sfile] = '\0';
118 if ((snp-sfile) >= sizeof (auxfile))
[all …]
/dports/sysutils/schilyutils/schily-2021-09-18/sccs/sccs/lib/comobj/src/
H A Dauxf.c64 register char *snp; local
70 snp = sname(sfile);
76 strlcpy(auxfile, &snp[2], sizeof (auxfile));
85 strlcpy(auxfile, snp, sizeof (auxfile));
95 if ((snp-sfile) >= sizeof (auxfile))
98 auxfile[snp-sfile] = '\0';
100 strlcat(auxfile, snp, sizeof (auxfile));
109 if ((snp-sfile) >= sizeof (auxfile))
112 auxfile[snp-sfile] = '\0';
118 if ((snp-sfile) >= sizeof (auxfile))
[all …]
/dports/biology/star/STAR-2.7.9a/source/
H A DVariation.cpp26 snp.N=0; in scanVCF()
65 snp.N++; in scanVCF()
84 snp.loci=new uint[snp.N]; in loadVCF()
85 for (uint ii=0;ii<snp.N;ii++) in loadVCF()
86 snp.loci[ii]=snp.lociV[ii]; in loadVCF()
87 snp.lociV.clear(); in loadVCF()
92 if (snp.N==0) { in loadVCF()
100 uint *s1=new uint[2*snp.N]; in loadVCF()
101 for (uint ii=0;ii<snp.N; ii++) { in loadVCF()
102 s1[2*ii]=snp.loci[ii]; in loadVCF()
[all …]
/dports/devel/plan9port/plan9port-1f098efb7370a0b28306d10681e21883fb1c1507/src/cmd/tbl/
H A Dt4.c134 snp[1] = 0; in readspec()
151 snp[0] = snp[1] = stopc = 0; in readspec()
171 snp[i] = c; in readspec()
191 *snp++ = c; in readspec()
193 *snp++ = c; in readspec()
199 *snp = 0; in readspec()
218 *snp++ = c; in readspec()
224 *snp = 0; in readspec()
248 *snp++ = c; in readspec()
250 *snp = 0; in readspec()
[all …]
/dports/biology/snpeff/snpEff/scripts/
H A DjoinSnpEff.pl23 my($snp) = "$chr:$pos\_$ref/$var";
24 $snps{$snp} .= $l;
34 my($snp, $lines, $quals, $q) = (@_);
86 foreach $snp ( keys %snps ) { $snpsAll[$j]->{$snp} = $snps{$snp}; }
92 my($snp, %done, %snpsi);
100 foreach $snp (sort keys %snpsi) { # For all snps...
101 if( ! $done{$snp} ) { # Not done yet?
107 if( exists $snpsAll[$j]{$snp} ) {
108 my($q) = parseSnpQ($snpsAll[$j]->{$snp});
118 $done{$snp} = 1;
[all …]

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