Home
last modified time | relevance | path

Searched refs:sortedHint (Results 1 – 18 of 18) sorted by relevance

/dports/biology/ugene/ugene-40.1/src/corelibs/U2Formats/src/mysql_dbi/util/
H A DMysqlMultiTableAssemblyAdapter.h59 …terator<U2AssemblyRead> *getReads(const U2Region &region, U2OpStatus &os, bool sortedHint = false);
173 …U2DbiIterator<U2AssemblyRead> *> &iterators, const QVector<QByteArray> &idExtras, bool sortedHint);
187 bool sortedHint; variable
H A DMysqlMultiTableAssemblyAdapter.cpp166 …ad> *MysqlMultiTableAssemblyAdapter::getReads(const U2Region &r, U2OpStatus &os, bool sortedHint) { in getReads() argument
170 iterators << a->singleTableAdapter->getReads(r, os, sortedHint); in getReads()
174 return new MysqlMtaReadsIterator(iterators, idExtras, sortedHint); in getReads()
841 : iterators(i), currentRange(0), idExtras(ie), sortedHint(sorted) { in MysqlMtaReadsIterator()
850 if (sortedHint) { in hasNext()
875 if (sortedHint) { in next()
916 if (sortedHint) { in peek()
H A DMysqlSingleTableAssemblyAdapter.h49 …2DbiIterator<U2AssemblyRead> *getReads(const U2Region &r, U2OpStatus &os, bool sortedHint = false);
H A DMysqlSingleTableAssemblyAdapter.cpp153 …d> *MysqlSingleTableAssemblyAdapter::getReads(const U2Region &r, U2OpStatus &os, bool sortedHint) { in getReads() argument
156 …ery> q(new U2SqlQuery(qStr.arg(readsTable).arg(rangeConditionCheck) + (sortedHint ? SORTED_READS :… in getReads()
/dports/biology/ugene/ugene-40.1/src/corelibs/U2Formats/src/sqlite_dbi/assembly/
H A DMultiTableAssemblyAdapter.h58 …2DbiIterator<U2AssemblyRead> *getReads(const U2Region &r, U2OpStatus &os, bool sortedHint = false);
182 …U2DbiIterator<U2AssemblyRead> *> &iterators, const QVector<QByteArray> &idExtras, bool sortedHint);
196 bool sortedHint; variable
H A DMultiTableAssemblyAdapter.cpp303 …blyRead> *MultiTableAssemblyAdapter::getReads(const U2Region &r, U2OpStatus &os, bool sortedHint) { in getReads() argument
306 iterators << a->singleTableAdapter->getReads(r, os, sortedHint); in getReads()
315 return new MTAReadsIterator(iterators, idExtras, sortedHint); in getReads()
766 : iterators(i), currentRange(0), idExtras(ie), sortedHint(sorted) { in MTAReadsIterator()
775 if (sortedHint) { in hasNext()
800 if (sortedHint) { in next()
841 if (sortedHint) { in peek()
H A DRTreeAssemblyAdapter.cpp95 …AssemblyRead> *RTreeAssemblyAdapter::getReads(const U2Region &r, U2OpStatus &os, bool sortedHint) { in getReads() argument
99 if (sortedHint) { in getReads()
H A DRTreeAssemblyAdapter.h44 …2DbiIterator<U2AssemblyRead> *getReads(const U2Region &r, U2OpStatus &os, bool sortedHint = false);
H A DSingleTableAssemblyAdapter.cpp140 …lyRead> *SingleTableAssemblyAdapter::getReads(const U2Region &r, U2OpStatus &os, bool sortedHint) { in getReads() argument
142 if (sortedHint) { in getReads()
H A DSingleTableAssemblyAdapter.h45 …2DbiIterator<U2AssemblyRead> *getReads(const U2Region &r, U2OpStatus &os, bool sortedHint = false);
/dports/biology/ugene/ugene-40.1/src/corelibs/U2Formats/src/util/
H A DAssemblyAdapter.h56 …Iterator<U2AssemblyRead> *getReads(const U2Region &r, U2OpStatus &os, bool sortedHint = false) = 0;
/dports/biology/ugene/ugene-40.1/src/corelibs/U2Core/src/dbi/
H A DU2AssemblyDbi.h123 …tReads(const U2DataId &assemblyId, const U2Region &r, U2OpStatus &os, bool sortedHint = false) = 0;
/dports/biology/ugene/ugene-40.1/src/corelibs/U2Formats/src/mysql_dbi/
H A DMysqlAssemblyDbi.h56 … *getReads(const U2DataId &assemblyId, const U2Region &r, U2OpStatus &os, bool sortedHint = false);
H A DMysqlAssemblyDbi.cpp138 …mblyDbi::getReads(const U2DataId &assemblyId, const U2Region &r, U2OpStatus &os, bool sortedHint) { in getReads() argument
142 return a->getReads(r, os, sortedHint); in getReads()
/dports/biology/ugene/ugene-40.1/src/corelibs/U2Formats/src/sqlite_dbi/
H A DSQLiteAssemblyDbi.h54 … *getReads(const U2DataId &assemblyId, const U2Region &r, U2OpStatus &os, bool sortedHint = false);
H A DSQLiteAssemblyDbi.cpp134 …mblyDbi::getReads(const U2DataId &assemblyId, const U2Region &r, U2OpStatus &os, bool sortedHint) { in getReads() argument
138 return a->getReads(r, os, sortedHint); in getReads()
/dports/biology/ugene/ugene-40.1/src/plugins/dbi_bam/src/
H A DDbi.h144 … *getReads(const U2DataId &assemblyId, const U2Region &r, U2OpStatus &os, bool sortedHint = false);
H A DSamtoolsBasedDbi.h108 … *getReads(const U2DataId &assemblyId, const U2Region &r, U2OpStatus &os, bool sortedHint = false);