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/dports/biology/viennarna/ViennaRNA-2.4.18/src/ViennaRNA/plotting/
H A Dstructures.h81 const char *ssfile,
93 const char *ssfile,
113 char *ssfile,
130 char *ssfile);
144 char *ssfile);
158 char *ssfile);
192 char *ssfile,
H A Dstructures.c120 if (!ssfile) { in vrna_file_PS_rnaplot_layout()
143 ssfile, in vrna_file_PS_rnaplot_layout()
185 xyplot = fopen(ssfile, "w"); in rnaplot_EPS()
318 char *ssfile, in gmlRNA() argument
327 gmlfile = fopen(ssfile, "w"); in gmlRNA()
414 xyplot = fopen(ssfile, "w"); in PS_rna_plot_snoop_a()
740 char *ssfile) in svg_rna_plot() argument
929 char *ssfile) in ssv_rna_plot() argument
1020 char *ssfile) in xrna_plot() argument
1074 char *ssfile) in PS_rna_plot() argument
[all …]
/dports/textproc/texi2html/texi2html-5.0/test/manuals/res_all/ccvs_mediawiki_nosplit/
H A Dcvs: Annotate command18 $ cvs annotate ssfile
19 Annotations for ssfile
21 1.1 (mary 27-Mar-96): ssfile line 1
22 1.2 (joe 28-Mar-96): ssfile line 2
25ssfile</tt>&rsquo; currently contains two lines. The <code>ssfile line 1</code> line was checked i…
/dports/textproc/texi2html/texi2html-5.0/test/manuals/res_info/ccvs_mediawiki_nosplit/
H A Dcvs: Annotate command18 $ cvs annotate ssfile
19 Annotations for ssfile
21 1.1 (mary 27-Mar-96): ssfile line 1
22 1.2 (joe 28-Mar-96): ssfile line 2
25ssfile</tt>&rsquo; currently contains two lines. The <code>ssfile line 1</code> line was checked i…
/dports/biology/viennarna/ViennaRNA-2.4.18/doc/refman.include/
H A Dplotting.dox31 char *ssfile,
39 char *ssfile)
46 char *ssfile)
53 char *ssfile)
/dports/net/freebsd-uucp/freebsd-uucp-r1_07_4/uucp/libunix/
H A Dwork.c82 struct ssfile *qfile;
86 struct ssfile struct
102 static struct ssfile *qSwork_file; argument
457 struct ssfile *qfile;
496 qfile = (struct ssfile *) xmalloc (sizeof (struct ssfile));
511 ((struct ssfile *)
513 (sizeof (struct ssfile) +
614 struct ssfile *qfile;
/dports/biology/viennarna/ViennaRNA-2.4.18/doc/latex/
H A Dplotting_2structures_8h_source.tex42 … \textcolor{keyword}{const} \textcolor{keywordtype}{char} *ssfile,}
54 …eLine{00093 \textcolor{keyword}{const} \textcolor{keywordtype}{char} *ssfile,}
62 \DoxyCodeLine{00113 \textcolor{keywordtype}{char} *ssfile,}
69 \DoxyCodeLine{00130 \textcolor{keywordtype}{char} *ssfile);}
75 \DoxyCodeLine{00144 \textcolor{keywordtype}{char} *ssfile);}
81 \DoxyCodeLine{00158 \textcolor{keywordtype}{char} *ssfile);}
98 \DoxyCodeLine{00192 \textcolor{keywordtype}{char} *ssfile,}
H A Dplotting_2structures_8h.tex31 …4ff76ccb8f329}{gml\+RNA}} (char $\ast$string, char $\ast$structure, char $\ast$ssfile, char option)
33 …b680243541df}{ssv\+\_\+rna\+\_\+plot}} (char $\ast$string, char $\ast$structure, char $\ast$ssfile)
35 …af434e979304}{svg\+\_\+rna\+\_\+plot}} (char $\ast$string, char $\ast$structure, char $\ast$ssfile)
37 …23df898896b8d6614483}{xrna\+\_\+plot}} (char $\ast$string, char $\ast$structure, char $\ast$ssfile)
43 …+\_\+a\+\_\+gquad}} (char $\ast$string, char $\ast$structure, char $\ast$ssfile, char $\ast$pre, c…
H A Dgroup__plotting__utils.tex67 …4ff76ccb8f329}{gml\+RNA}} (char $\ast$string, char $\ast$structure, char $\ast$ssfile, char option)
69 …b680243541df}{ssv\+\_\+rna\+\_\+plot}} (char $\ast$string, char $\ast$structure, char $\ast$ssfile)
71 …af434e979304}{svg\+\_\+rna\+\_\+plot}} (char $\ast$string, char $\ast$structure, char $\ast$ssfile)
73 …23df898896b8d6614483}{xrna\+\_\+plot}} (char $\ast$string, char $\ast$structure, char $\ast$ssfile)
243 {\em ssfile} & The filename of the gml output \\
255 …\ast$}]{string, }\item[{char $\ast$}]{structure, }\item[{char $\ast$}]{ssfile }\end{DoxyParamCap…
273 {\em ssfile} & The filename of the ssv output \\
283 …\ast$}]{string, }\item[{char $\ast$}]{structure, }\item[{char $\ast$}]{ssfile }\end{DoxyParamCap…
299 {\em ssfile} & The filename of the svg output \\
309 …\ast$}]{string, }\item[{char $\ast$}]{structure, }\item[{char $\ast$}]{ssfile }\end{DoxyParamCap…
[all …]
/dports/textproc/texi2html/texi2html-5.0/test/manuals/res_all/ccvs_mediawiki/
H A Dcvs: History browsing138 $ cvs annotate ssfile
139 Annotations for ssfile
141 1.1 (mary 27-Mar-96): ssfile line 1
142 1.2 (joe 28-Mar-96): ssfile line 2
145ssfile</tt>&rsquo; currently contains two lines. The <code>ssfile line 1</code> line was checked i…
/dports/textproc/texi2html/texi2html-5.0/test/manuals/res_info/ccvs_mediawiki/
H A Dcvs: History browsing138 $ cvs annotate ssfile
139 Annotations for ssfile
141 1.1 (mary 27-Mar-96): ssfile line 1
142 1.2 (joe 28-Mar-96): ssfile line 2
145ssfile</tt>&rsquo; currently contains two lines. The <code>ssfile line 1</code> line was checked i…
/dports/textproc/texi2html/texi2html-5.0/test/manuals/res/ccvs_mediawiki/
H A Dcvs: History browsing193 $ cvs annotate ssfile
194 Annotations for ssfile
196 1.1 (mary 27-Mar-96): ssfile line 1
197 1.2 (joe 28-Mar-96): ssfile line 2
200ssfile</tt>&rsquo; currently contains two lines. The <code>ssfile line 1</code> line was checked i…
/dports/java/openjdk16/jdk16u-jdk-16.0.2-7-1/src/jdk.javadoc/share/classes/jdk/javadoc/internal/doclets/formats/html/
H A DHtmlOptions.java484 DocFile ssfile = DocFile.createFileForInput(config, ssheet); in validateOptions() local
485 if (!ssfile.exists()) { in validateOptions()
/dports/java/openjdk17/jdk17u-jdk-17.0.1-12-1/src/jdk.javadoc/share/classes/jdk/javadoc/internal/doclets/formats/html/
H A DHtmlOptions.java497 DocFile ssfile = DocFile.createFileForInput(config, ssheet); in validateOptions() local
498 if (!ssfile.exists()) { in validateOptions()
/dports/java/openjdk15/jdk15u-jdk-15.0.6-1-1/src/jdk.javadoc/share/classes/jdk/javadoc/internal/doclets/formats/html/
H A DHtmlOptions.java490 DocFile ssfile = DocFile.createFileForInput(config, ssheet); in validateOptions() local
491 if (!ssfile.exists()) { in validateOptions()
/dports/biology/hisat2/hisat2-2.2.1/
H A Dhisat2_build.cpp445 const string& ssfile, in driver() argument
547 ssfile, in driver()
583 ssfile, in driver()
H A Drfm.h349 const string& ssfile,
636 const string& ssfile, in RFM() argument
668 ssfile, in RFM()
/dports/java/openjdk13/jdk13u-jdk-13.0.10-1-1/src/jdk.javadoc/share/classes/jdk/javadoc/internal/doclets/formats/html/
H A DHtmlConfiguration.java314 DocFile ssfile = DocFile.createFileForInput(this, ssheet); in validateOptions() local
315 if (!ssfile.exists()) { in validateOptions()
/dports/java/openjdk14/jdk14u-jdk-14.0.2-12-1/src/jdk.javadoc/share/classes/jdk/javadoc/internal/doclets/formats/html/
H A DHtmlConfiguration.java309 DocFile ssfile = DocFile.createFileForInput(this, ssheet); in validateOptions() local
310 if (!ssfile.exists()) { in validateOptions()
/dports/java/openjdk11/jdk11u-jdk-11.0.13-8-1/src/jdk.javadoc/share/classes/jdk/javadoc/internal/doclets/formats/html/
H A DHtmlConfiguration.java324 DocFile ssfile = DocFile.createFileForInput(this, ssheet); in validateOptions() local
325 if (!ssfile.exists()) { in validateOptions()
/dports/java/openjdk12/openjdk-jdk12u-jdk-12.0.2-10-4/src/jdk.javadoc/share/classes/jdk/javadoc/internal/doclets/formats/html/
H A DHtmlConfiguration.java328 DocFile ssfile = DocFile.createFileForInput(this, ssheet); in validateOptions() local
329 if (!ssfile.exists()) { in validateOptions()
/dports/java/openjdk11-jre/jdk11u-jdk-11.0.13-8-1/src/jdk.javadoc/share/classes/jdk/javadoc/internal/doclets/formats/html/
H A DHtmlConfiguration.java324 DocFile ssfile = DocFile.createFileForInput(this, ssheet); in validateOptions() local
325 if (!ssfile.exists()) { in validateOptions()
/dports/biology/viennarna/ViennaRNA-2.4.18/interfaces/Python/
H A DRNA.py2168 def gmlRNA(string, structure, ssfile, option): argument
2169 return _RNA.gmlRNA(string, structure, ssfile, option)
2171 def ssv_rna_plot(string, structure, ssfile): argument
2172 return _RNA.ssv_rna_plot(string, structure, ssfile)
2174 def svg_rna_plot(string, structure, ssfile): argument
2175 return _RNA.svg_rna_plot(string, structure, ssfile)
2177 def xrna_plot(string, structure, ssfile): argument
2178 return _RNA.xrna_plot(string, structure, ssfile)
2186 def PS_rna_plot_a_gquad(string, structure, ssfile, pre, post): argument
2187 return _RNA.PS_rna_plot_a_gquad(string, structure, ssfile, pre, post)
/dports/biology/viennarna/ViennaRNA-2.4.18/interfaces/Python3/
H A DRNA.py2168 def gmlRNA(string: "char *", structure: "char *", ssfile: "char *", option: "char") -> "int":
2169 return _RNA.gmlRNA(string, structure, ssfile, option)
2171 def ssv_rna_plot(string: "char *", structure: "char *", ssfile: "char *") -> "int":
2172 return _RNA.ssv_rna_plot(string, structure, ssfile)
2174 def svg_rna_plot(string: "char *", structure: "char *", ssfile: "char *") -> "int":
2175 return _RNA.svg_rna_plot(string, structure, ssfile)
2177 def xrna_plot(string: "char *", structure: "char *", ssfile: "char *") -> "int":
2178 return _RNA.xrna_plot(string, structure, ssfile)
2186 def PS_rna_plot_a_gquad(string: "char *", structure: "char *", ssfile: "char *", pre: "char *", pos…
2187 return _RNA.PS_rna_plot_a_gquad(string, structure, ssfile, pre, post)
/dports/comms/kermit/kermit-9.0.305.04/
H A Dckcpro.c56 #define ssfile 6 macro
1867 BEGIN ssfile; /* and switch to receive-file state */ in wart() local
2108 BEGIN ssfile; /* if ok, enter send-file state */ in wart() local
2131 BEGIN ssfile; /* If OK, enter send-file state */ in wart()

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