| /dports/biology/wise/wise2.4.1/src/models/ |
| H A D | estfrag3.h | 26 Score start_frag; member
110 … * out,GeneWiseDB* querydb,cDNADB* targetdb ,cDNAParserScore * cp,Score start_frag,Score end_frag);
130 … * out,GeneWiseDB* querydb,cDNADB* targetdb ,cDNAParserScore * cp,Score start_frag,Score end_frag);
157 …neWiseScore* query,ComplexSequence* target ,cDNAParserScore * cp,Score start_frag,Score end_frag,D…
178 …neWiseScore* query,ComplexSequence* target ,cDNAParserScore * cp,Score start_frag,Score end_frag,D…
212 …eneWiseScore* query,ComplexSequence* target ,cDNAParserScore * cp,Score start_frag,Score end_frag);
388 …eneWiseScore* query,ComplexSequence* target ,cDNAParserScore * cp,Score start_frag,Score end_frag);
390 …eneWiseScore* query,ComplexSequence* target ,cDNAParserScore * cp,Score start_frag,Score end_frag);
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| H A D | estfrag3.dy | 30 resource type="Score" name="start_frag"
49 calc="start_frag + query->seg[i]->match[CDNA_CODON(target,j)]"
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| H A D | estfrag3.c | 507 return serial_search_EstFrag3(out,querydb, targetdb ,cp,start_frag,end_frag); in search_EstFrag3()
574 score = score_only_EstFrag3(query, target , cp, start_frag, end_frag); in serial_search_EstFrag3()
643 mat = allocate_EstFrag3_only(query, target , cp, start_frag, end_frag); in score_only_EstFrag3()
988 … if( (mat=allocate_Expl_EstFrag3(query, target , cp, start_frag, end_frag,dpri)) == NULL ) { in PackAln_bestmemory_EstFrag3()
996 mat = allocate_EstFrag3_only(query, target , cp, start_frag, end_frag); in PackAln_bestmemory_EstFrag3()
1004 if( (mat=allocate_Small_EstFrag3(query, target , cp, start_frag, end_frag)) == NULL ) { in PackAln_bestmemory_EstFrag3()
1012 … if( (mat=allocate_Expl_EstFrag3(query, target , cp, start_frag, end_frag,dpri)) == NULL ) { in PackAln_bestmemory_EstFrag3()
1062 out->start_frag = start_frag; in allocate_EstFrag3_only()
1092 out = allocate_EstFrag3_only(query, target , cp, start_frag, end_frag); in allocate_Expl_EstFrag3()
1199 … pau->score = (mat->start_frag+mat->query->seg[i]->match[CSEQ_CDNA_CODON(mat->target,j)]) + (0); in recalculate_PackAln_EstFrag3()
[all …]
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| /dports/www/htdigest/httpd-2.4.6/modules/metadata/ |
| H A D | mod_mime_magic.c | 613 static char *rsl_strdup(request_rec *r, int start_frag, int start_pos, int len) in rsl_strdup() argument
632 if (cur_frag < start_frag) in rsl_strdup()
636 for (cur_pos = (cur_frag == start_frag) ? start_pos : 0; in rsl_strdup()
639 if (cur_frag >= start_frag in rsl_strdup()
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| /dports/www/apache24/httpd-2.4.53/modules/metadata/ |
| H A D | mod_mime_magic.c | 612 static char *rsl_strdup(request_rec *r, int start_frag, int start_pos, int len) in rsl_strdup() argument
631 if (cur_frag < start_frag) in rsl_strdup()
635 for (cur_pos = (cur_frag == start_frag) ? start_pos : 0; in rsl_strdup()
638 if (cur_frag >= start_frag in rsl_strdup()
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| /dports/devel/zpu-gcc/zpu-toolchain-1.0/toolchain/binutils/gas/config/ |
| H A D | tc-xtensa.c | 3182 is_dnrange (start_frag, sym, stretch) in is_dnrange() argument
3183 fragS *start_frag; in is_dnrange()
3191 if (cur_frag->fr_address >= start_frag->fr_address - stretch)
3198 if (cur_frag == start_frag)
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| /dports/devel/zpu-binutils/zpu-toolchain-1.0/toolchain/binutils/gas/config/ |
| H A D | tc-xtensa.c | 3182 is_dnrange (start_frag, sym, stretch) in is_dnrange() argument
3183 fragS *start_frag; in is_dnrange()
3191 if (cur_frag->fr_address >= start_frag->fr_address - stretch)
3198 if (cur_frag == start_frag)
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| /dports/devel/binutils/binutils-2.37/gas/config/ |
| H A D | tc-i386.c | 9121 encoding_length (const fragS *start_frag, offsetT start_off, in encoding_length() argument
9126 if (start_frag != frag_now) in encoding_length()
9128 const fragS *fr = start_frag; in encoding_length()
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| /dports/devel/gnulibiberty/binutils-2.37/gas/config/ |
| H A D | tc-i386.c | 9121 encoding_length (const fragS *start_frag, offsetT start_off, in encoding_length() argument
9126 if (start_frag != frag_now) in encoding_length()
9128 const fragS *fr = start_frag; in encoding_length()
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| /dports/devel/arm-elf-binutils/binutils-2.37/gas/config/ |
| H A D | tc-i386.c | 9121 encoding_length (const fragS *start_frag, offsetT start_off, in encoding_length() argument
9126 if (start_frag != frag_now) in encoding_length()
9128 const fragS *fr = start_frag; in encoding_length()
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