Searched refs:startingChromosome (Results 1 – 2 of 2) sorted by relevance
| /dports/biology/gatk/gatk-4.2.0.0/src/main/java/org/broadinstitute/hellbender/utils/read/ |
| H A D | ArtificialReadUtils.java | 32 …MFileHeader createArtificialSamHeader(int numberOfChromosomes, int startingChromosome, int chromos… in createArtificialSamHeader() argument
37 for (int x = startingChromosome; x < startingChromosome + numberOfChromosomes; x++) { in createArtificialSamHeader()
55 …r createArtificialSamHeaderWithGroups(int numberOfChromosomes, int startingChromosome, int chromos… in createArtificialSamHeaderWithGroups() argument
56 …FileHeader header = createArtificialSamHeader(numberOfChromosomes, startingChromosome, chromosomeS… in createArtificialSamHeaderWithGroups()
84 …createArtificialSamHeaderWithPrograms(int numberOfChromosomes, int startingChromosome, int chromos… in createArtificialSamHeaderWithPrograms() argument
85 …FileHeader header = createArtificialSamHeader(numberOfChromosomes, startingChromosome, chromosomeS… in createArtificialSamHeaderWithPrograms()
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| /dports/biology/gatk/gatk-4.2.0.0/src/test/java/org/broadinstitute/hellbender/tools/walkers/mutect/ |
| H A D | UniqueAltReadCountUnitTest.java | 66 final int startingChromosome = 1; in createTestLikelihoods() local
68 …ER = ArtificialReadUtils.createArtificialSamHeader(numChromosomes, startingChromosome, chromosomeS… in createTestLikelihoods()
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