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Searched refs:stkfile2 (Results 1 – 10 of 10) sorted by relevance

/dports/biology/infernal/infernal-1.1.3/easel/
H A Desl_msafile_afa.c443 char stkfile2[32] = "esltmpstk2XXXXXX"; in read_test_msas_digital() local
460 if ( esl_tmpfile_named(stkfile2, &stkfp) != eslOK) esl_fatal(msg); in read_test_msas_digital()
466 …if ( esl_msafile_Open(&abc, stkfile2, NULL, eslMSAFILE_STOCKHOLM, NULL, &afp2) != eslOK) esl_fatal… in read_test_msas_digital()
472 remove(stkfile2); in read_test_msas_digital()
492 char stkfile2[32] = "esltmpstk2XXXXXX"; in read_test_msas_text() local
506 if ( esl_tmpfile_named(stkfile2, &stkfp) != eslOK) esl_fatal(msg); in read_test_msas_text()
512 …if ( esl_msafile_Open(NULL, stkfile2, NULL, eslMSAFILE_STOCKHOLM, NULL, &afp2) != eslOK) esl_fatal… in read_test_msas_text()
518 remove(stkfile2); in read_test_msas_text()
H A Desl_msafile_psiblast.c531 char stkfile2[32] = "esltmpstk2XXXXXX"; in read_test_msas_digital() local
548 …if ( esl_tmpfile_named(stkfile2, &stkfp) != eslOK) esl_fatal(msg); in read_test_msas_digital()
554 …if ( esl_msafile_Open(&abc, stkfile2, NULL, eslMSAFILE_STOCKHOLM, NULL, &afp2) != eslOK) esl_fatal… in read_test_msas_digital()
560 remove(stkfile2); in read_test_msas_digital()
580 char stkfile2[32] = "esltmpstk2XXXXXX"; in read_test_msas_text() local
594 …if ( esl_tmpfile_named(stkfile2, &stkfp) != eslOK) esl_fatal(msg… in read_test_msas_text()
600 …if ( esl_msafile_Open(NULL, stkfile2, NULL, eslMSAFILE_STOCKHOLM, NULL, &afp2) != eslOK) esl_fata… in read_test_msas_text()
606 remove(stkfile2); in read_test_msas_text()
H A Desl_msafile_clustal.c776 char stkfile2[32] = "esltmpstk2XXXXXX"; in read_test_msas_digital() local
793 …if ( esl_tmpfile_named(stkfile2, &stkfp) != eslOK) esl_fatal(msg); in read_test_msas_digital()
799 …if ( esl_msafile_Open(&abc, stkfile2, NULL, eslMSAFILE_STOCKHOLM, NULL, &afp2) != eslOK) esl_fatal… in read_test_msas_digital()
805 remove(stkfile2); in read_test_msas_digital()
825 char stkfile2[32] = "esltmpstk2XXXXXX"; in read_test_msas_text() local
839 …if ( esl_tmpfile_named(stkfile2, &stkfp) != eslOK) esl_fatal(msg… in read_test_msas_text()
845 …if ( esl_msafile_Open(NULL, stkfile2, NULL, eslMSAFILE_STOCKHOLM, NULL, &afp2) != eslOK) esl_fata… in read_test_msas_text()
851 remove(stkfile2); in read_test_msas_text()
H A Desl_msafile_a2m.c787 char stkfile2[32] = "esltmpstk2XXXXXX"; in read_test_msas_digital() local
804 if ( esl_tmpfile_named(stkfile2, &stkfp) != eslOK) esl_fatal(msg); in read_test_msas_digital()
810 …if ( esl_msafile_Open(&abc, stkfile2, NULL, eslMSAFILE_STOCKHOLM, NULL, &afp2) != eslOK) esl_fatal… in read_test_msas_digital()
816 remove(stkfile2); in read_test_msas_digital()
836 char stkfile2[32] = "esltmpstk2XXXXXX"; in read_test_msas_text() local
850 if ( esl_tmpfile_named(stkfile2, &stkfp) != eslOK) esl_fatal(msg); in read_test_msas_text()
856 …if ( esl_msafile_Open(NULL, stkfile2, NULL, eslMSAFILE_STOCKHOLM, NULL, &afp2) != eslOK) esl_fatal… in read_test_msas_text()
862 remove(stkfile2); in read_test_msas_text()
H A Desl_msafile_selex.c958 char stkfile2[32] = "esltmpstk2XXXXXX"; in read_test_msas_digital() local
975 …if ( esl_tmpfile_named(stkfile2, &stkfp) != eslOK) esl_fatal(msg); in read_test_msas_digital()
981 …if ( esl_msafile_Open(&abc, stkfile2, NULL, eslMSAFILE_STOCKHOLM, NULL, &afp2) != eslOK) esl_fatal… in read_test_msas_digital()
987 remove(stkfile2); in read_test_msas_digital()
1007 char stkfile2[32] = "esltmpstk2XXXXXX"; in read_test_msas_text() local
1021 if ( esl_tmpfile_named(stkfile2, &stkfp) != eslOK) esl_fatal(msg); in read_test_msas_text()
1027 …if ( esl_msafile_Open(NULL, stkfile2, NULL, eslMSAFILE_STOCKHOLM, NULL, &afp2) != eslOK) esl_fata… in read_test_msas_text()
1033 remove(stkfile2); in read_test_msas_text()
/dports/biology/hmmer/hmmer-3.3/easel/
H A Desl_msafile_afa.c443 char stkfile2[32] = "esltmpstk2XXXXXX"; in read_test_msas_digital() local
460 if ( esl_tmpfile_named(stkfile2, &stkfp) != eslOK) esl_fatal(msg); in read_test_msas_digital()
466 …if ( esl_msafile_Open(&abc, stkfile2, NULL, eslMSAFILE_STOCKHOLM, NULL, &afp2) != eslOK) esl_fatal… in read_test_msas_digital()
472 remove(stkfile2); in read_test_msas_digital()
492 char stkfile2[32] = "esltmpstk2XXXXXX"; in read_test_msas_text() local
506 if ( esl_tmpfile_named(stkfile2, &stkfp) != eslOK) esl_fatal(msg); in read_test_msas_text()
512 …if ( esl_msafile_Open(NULL, stkfile2, NULL, eslMSAFILE_STOCKHOLM, NULL, &afp2) != eslOK) esl_fatal… in read_test_msas_text()
518 remove(stkfile2); in read_test_msas_text()
H A Desl_msafile_psiblast.c531 char stkfile2[32] = "esltmpstk2XXXXXX"; in read_test_msas_digital() local
548 …if ( esl_tmpfile_named(stkfile2, &stkfp) != eslOK) esl_fatal(msg); in read_test_msas_digital()
554 …if ( esl_msafile_Open(&abc, stkfile2, NULL, eslMSAFILE_STOCKHOLM, NULL, &afp2) != eslOK) esl_fatal… in read_test_msas_digital()
560 remove(stkfile2); in read_test_msas_digital()
580 char stkfile2[32] = "esltmpstk2XXXXXX"; in read_test_msas_text() local
594 …if ( esl_tmpfile_named(stkfile2, &stkfp) != eslOK) esl_fatal(msg… in read_test_msas_text()
600 …if ( esl_msafile_Open(NULL, stkfile2, NULL, eslMSAFILE_STOCKHOLM, NULL, &afp2) != eslOK) esl_fata… in read_test_msas_text()
606 remove(stkfile2); in read_test_msas_text()
H A Desl_msafile_clustal.c776 char stkfile2[32] = "esltmpstk2XXXXXX"; in read_test_msas_digital() local
793 …if ( esl_tmpfile_named(stkfile2, &stkfp) != eslOK) esl_fatal(msg); in read_test_msas_digital()
799 …if ( esl_msafile_Open(&abc, stkfile2, NULL, eslMSAFILE_STOCKHOLM, NULL, &afp2) != eslOK) esl_fatal… in read_test_msas_digital()
805 remove(stkfile2); in read_test_msas_digital()
825 char stkfile2[32] = "esltmpstk2XXXXXX"; in read_test_msas_text() local
839 …if ( esl_tmpfile_named(stkfile2, &stkfp) != eslOK) esl_fatal(msg… in read_test_msas_text()
845 …if ( esl_msafile_Open(NULL, stkfile2, NULL, eslMSAFILE_STOCKHOLM, NULL, &afp2) != eslOK) esl_fata… in read_test_msas_text()
851 remove(stkfile2); in read_test_msas_text()
H A Desl_msafile_a2m.c787 char stkfile2[32] = "esltmpstk2XXXXXX"; in read_test_msas_digital() local
804 if ( esl_tmpfile_named(stkfile2, &stkfp) != eslOK) esl_fatal(msg); in read_test_msas_digital()
810 …if ( esl_msafile_Open(&abc, stkfile2, NULL, eslMSAFILE_STOCKHOLM, NULL, &afp2) != eslOK) esl_fatal… in read_test_msas_digital()
816 remove(stkfile2); in read_test_msas_digital()
836 char stkfile2[32] = "esltmpstk2XXXXXX"; in read_test_msas_text() local
850 if ( esl_tmpfile_named(stkfile2, &stkfp) != eslOK) esl_fatal(msg); in read_test_msas_text()
856 …if ( esl_msafile_Open(NULL, stkfile2, NULL, eslMSAFILE_STOCKHOLM, NULL, &afp2) != eslOK) esl_fatal… in read_test_msas_text()
862 remove(stkfile2); in read_test_msas_text()
H A Desl_msafile_selex.c958 char stkfile2[32] = "esltmpstk2XXXXXX"; in read_test_msas_digital() local
975 …if ( esl_tmpfile_named(stkfile2, &stkfp) != eslOK) esl_fatal(msg); in read_test_msas_digital()
981 …if ( esl_msafile_Open(&abc, stkfile2, NULL, eslMSAFILE_STOCKHOLM, NULL, &afp2) != eslOK) esl_fatal… in read_test_msas_digital()
987 remove(stkfile2); in read_test_msas_digital()
1007 char stkfile2[32] = "esltmpstk2XXXXXX"; in read_test_msas_text() local
1021 if ( esl_tmpfile_named(stkfile2, &stkfp) != eslOK) esl_fatal(msg); in read_test_msas_text()
1027 …if ( esl_msafile_Open(NULL, stkfile2, NULL, eslMSAFILE_STOCKHOLM, NULL, &afp2) != eslOK) esl_fata… in read_test_msas_text()
1033 remove(stkfile2); in read_test_msas_text()