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Searched refs:subdbp (Results 1 – 15 of 15) sorted by relevance

/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/flatfile/
H A Dind.cpp126 DataBlkPtr subdbp; in ind_subdbp() local
146 for(subdbp = (DataBlkPtr) dbp->data; subdbp != NULL; subdbp = subdbp->next) in ind_subdbp()
148 if(ind[subdbp->type] != NULL) in ind_subdbp()
158 ind[subdbp->type] = subdbp; in ind_subdbp()
160 i = StringLen(ref_tag[subdbp->type]); in ind_subdbp()
161 subdbp->offset[subdbp->len-1] = '\0'; in ind_subdbp()
164 subdbp->offset += i; in ind_subdbp()
165 subdbp->len -= (i + 1); in ind_subdbp()
167 for(s = subdbp->offset; *s != '\0'; s++) in ind_subdbp()
186 subdbp->len -= (ss - s - 1); in ind_subdbp()
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H A Dpir_ascii.cpp2185 DataBlkPtr subdbp; in pir_feat() local
2206 for(subdbp = (DataBlkPtr) dbp->data; subdbp != NULL; subdbp = subdbp->next) in pir_feat()
2208 str = StringSave(std::string(subdbp->offset, subdbp->offset + subdbp->len).c_str()); in pir_feat()
2543 DataBlkPtr subdbp; in featdbp() local
2556 subdbp = PirDataBlkNew(); in featdbp()
2557 subdbp->offset = bptr; in featdbp()
2593 DataBlkPtr subdbp; in subdbp_func() local
2616 subdbp->type = 0; in subdbp_func()
2621 subdbp->offset = str; in subdbp_func()
2634 subdbp->len = s0 - subdbp->offset; in subdbp_func()
[all …]
H A Dsp_ascii.cpp783 DataBlkPtr subdbp; in GetSPGenome() local
791 for(; subdbp != NULL; subdbp = subdbp->next) in GetSPGenome()
1522 DataBlkPtr subdbp; in GetTaxIdFrom_OX() local
1535 subdbp = (DataBlkPtr) dbp->data; in GetTaxIdFrom_OX()
1536 for(; subdbp != NULL; subdbp = subdbp->next) in GetTaxIdFrom_OX()
1541 ch = subdbp->offset[subdbp->len-1]; in GetTaxIdFrom_OX()
1542 subdbp->offset[subdbp->len-1] = '\0'; in GetTaxIdFrom_OX()
1544 subdbp->offset[subdbp->len-1] = ch; in GetTaxIdFrom_OX()
1653 DataBlkPtr subdbp; in get_plasmid() local
1666 subdbp = (DataBlkPtr) dbp->data; in get_plasmid()
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H A Dem_ascii.cpp2316 DataBlkPtr subdbp; in FakeEmblBioSources() local
2358 subdbp = (DataBlkPtr) dbp->data; in FakeEmblBioSources()
2359 for(; subdbp != NULL; subdbp = subdbp->next) in FakeEmblBioSources()
2361 if(subdbp->type == ParFlat_OG) in FakeEmblBioSources()
2363 GetGenomeInfo(*bio_src, subdbp->offset + ParFlat_COL_DATA_EMBL); in FakeEmblBioSources()
2366 if(subdbp->type != ParFlat_OC || subdbp->offset == NULL || in FakeEmblBioSources()
2367 subdbp->len < ParFlat_COL_DATA_EMBL) in FakeEmblBioSources()
2370 ch = subdbp->offset[subdbp->len]; in FakeEmblBioSources()
2371 subdbp->offset[subdbp->len] = '\0'; in FakeEmblBioSources()
2372 q = StringSave(subdbp->offset + ParFlat_COL_DATA_EMBL); in FakeEmblBioSources()
[all …]
H A Dsp_ref.cpp491 DataBlkPtr subdbp; in SprotRefString() local
510 for(subdbp = (DataBlkPtr) dbp->data; subdbp != NULL; subdbp = subdbp->next) in SprotRefString()
514 bptr = subdbp->offset; in SprotRefString()
515 eptr = bptr + subdbp->len; in SprotRefString()
524 switch(subdbp->type) in SprotRefString()
H A Dloadfeat.cpp1225 DataBlkPtr subdbp; in SeqFeatPub() local
1295 subdbp = (DataBlkPtr) dbp->data; in SeqFeatPub()
1296 for(; subdbp != NULL; subdbp = subdbp->next) in SeqFeatPub()
1298 if(subdbp->type != ParFlat_RP) in SeqFeatPub()
1301 for(p = subdbp->offset; *p != '\0' && IS_DIGIT(*p) == 0;) in SeqFeatPub()
/dports/databases/db18/db-18.1.40/src/db/
H A Ddb.c78 __db_master_open(subdbp, ip, txn, name, flags, mode, dbpp) in __db_master_open() argument
79 DB *subdbp; in __db_master_open()
93 if ((ret = __db_create_internal(&dbp, subdbp->env, 0)) != 0)
97 dbp->dirname = subdbp->dirname;
105 dbp->pgsize = subdbp->pgsize;
107 F_SET(dbp, F_ISSET(subdbp,
119 if (LF_ISSET(DB_CREATE) && subdbp->blob_threshold != 0) {
144 F_SET(subdbp, DB_AM_CHKSUM);
150 subdbp->pgsize = dbp->pgsize;
/dports/databases/db5/db-5.3.28/build_vxworks/util/
H A Ddb_load.c803 db_load_configure(dbenv, dbp, clp, subdbp, keysp) in db_load_configure() argument
806 char **clp, **subdbp;
827 if (*subdbp != NULL)
828 free(*subdbp);
829 if ((*subdbp = strdup(value)) == NULL) {
888 db_load_rheader(dbenv, dbp, dbtypep, subdbp, checkprintp, keysp, part_keyp) in db_load_rheader() argument
892 char **subdbp;
991 if ((ret = db_load_convprintable(dbenv, value, subdbp)) != 0) {
/dports/databases/db5/db-5.3.28/src/db/
H A Ddb.c77 __db_master_open(subdbp, ip, txn, name, flags, mode, dbpp) in __db_master_open() argument
78 DB *subdbp; in __db_master_open()
92 if ((ret = __db_create_internal(&dbp, subdbp->env, 0)) != 0)
96 dbp->dirname = subdbp->dirname;
104 dbp->pgsize = subdbp->pgsize;
106 F_SET(dbp, F_ISSET(subdbp,
129 F_SET(subdbp, DB_AM_CHKSUM);
135 subdbp->pgsize = dbp->pgsize;
/dports/databases/db5/db-5.3.28/util/
H A Ddb_load.c788 configure(dbenv, dbp, clp, subdbp, keysp) in configure() argument
791 char **clp, **subdbp;
812 if (*subdbp != NULL)
813 free(*subdbp);
814 if ((*subdbp = strdup(value)) == NULL) {
873 rheader(dbenv, dbp, dbtypep, subdbp, checkprintp, keysp, part_keyp) in rheader() argument
877 char **subdbp;
976 if ((ret = convprintable(dbenv, value, subdbp)) != 0) {
/dports/databases/db18/db-18.1.40/util/
H A Ddb_load.c886 configure(dbenv, dbp, clp, subdbp, keysp) in configure() argument
889 char **clp, **subdbp;
910 if (*subdbp != NULL)
911 free(*subdbp);
912 if ((*subdbp = strdup(value)) == NULL) {
971 rheader(dbenv, dbp, dbtypep, subdbp, checkprintp, keysp, part_keyp) in rheader() argument
975 char **subdbp;
1074 if ((ret = convprintable(dbenv, value, subdbp)) != 0) {
/dports/databases/db18/db-18.1.40/build_vxworks/util/
H A Ddb_load.c901 db_load_configure(dbenv, dbp, clp, subdbp, keysp) in db_load_configure() argument
904 char **clp, **subdbp;
925 if (*subdbp != NULL)
926 free(*subdbp);
927 if ((*subdbp = strdup(value)) == NULL) {
986 db_load_rheader(dbenv, dbp, dbtypep, subdbp, checkprintp, keysp, part_keyp) in db_load_rheader() argument
990 char **subdbp;
1089 if ((ret = db_load_convprintable(dbenv, value, subdbp)) != 0) {
/dports/textproc/htdig/htdig-3.2.0b6/htdb/
H A Dhtdb_load.cc508 configure(DB *dbp, char **clp, char **subdbp, int *keysp) in configure() argument
524 if ((*subdbp = strdup(value)) == NULL) { in configure()
572 rheader(DB *dbp, DBTYPE *dbtypep, char **subdbp, int *checkprintp, int *keysp) in rheader() argument
649 if ((*subdbp = strdup(value)) == NULL) { in rheader()
/dports/textproc/mifluz/mifluz-0.26.0/htdb/
H A Dhtdb_load.cc682 configure(DB *dbp, char **clp, char **subdbp, int *keysp) in configure() argument
699 if ((*subdbp = strdup(value)) == NULL) { in configure()
748 rheader(DB *dbp, DBTYPE *dbtypep, char **subdbp, int *checkprintp, int *keysp) in rheader() argument
826 if ((*subdbp = strdup(value)) == NULL) { in rheader()
/dports/textproc/mifluz/mifluz-0.26.0/db/
H A Ddb.c401 CDB___db_master_open(subdbp, name, flags, mode, dbpp) in CDB___db_master_open() argument
402 DB *subdbp; in CDB___db_master_open()
412 if ((ret = CDB_db_create(&dbp, subdbp->dbenv, 0)) != 0)
422 dbp->open_txn = subdbp->open_txn;
423 dbp->pgsize = subdbp->pgsize;