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Searched refs:subj_input_stream (Results 1 – 2 of 2) sorted by relevance

/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/blastinput/
H A Dblast_args.cpp1821 CNcbiIstream& subj_input_stream = args[arg_sub].AsInputFile(); in ExtractAlgorithmOptions() local
1831 CRef<CScope> scope = ReadSequencesToBlast(subj_input_stream, in ExtractAlgorithmOptions()
2418 CNcbiIstream* subj_input_stream = NULL; in ExtractAlgorithmOptions() local
2425 subj_input_stream = decompress_stream.get(); in ExtractAlgorithmOptions()
2428 subj_input_stream = &args[kArgSubject].AsInputFile(); in ExtractAlgorithmOptions()
2445 m_Scope = ReadSequencesToBlast(*subj_input_stream, IsProtein(), in ExtractAlgorithmOptions()
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/blastinput/
H A Dblast_args.cpp1821 CNcbiIstream& subj_input_stream = args[arg_sub].AsInputFile(); in ExtractAlgorithmOptions() local
1831 CRef<CScope> scope = ReadSequencesToBlast(subj_input_stream, in ExtractAlgorithmOptions()
2418 CNcbiIstream* subj_input_stream = NULL; in ExtractAlgorithmOptions() local
2425 subj_input_stream = decompress_stream.get(); in ExtractAlgorithmOptions()
2428 subj_input_stream = &args[kArgSubject].AsInputFile(); in ExtractAlgorithmOptions()
2445 m_Scope = ReadSequencesToBlast(*subj_input_stream, IsProtein(), in ExtractAlgorithmOptions()