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Searched refs:subspecies (Results 1 – 25 of 240) sorted by relevance

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/dports/biology/p5-BioPerl-Run/BioPerl-Run-1.007003/t/data/taxdump/
H A Dnodes.dmp45 9594 | 9593 | subspecies | GG | 5 | 1 | 1 | 1 | 2 | 1 | 1 | 0 | |
46 9595 | 9593 | subspecies | GG | 5 | 1 | 1 | 1 | 2 | 1 | 1 | 0 | |
52 9601 | 9600 | subspecies | PP | 5 | 1 | 1 | 1 | 2 | 1 | 1 | 0 | |
53 9602 | 9600 | subspecies | PP | 5 | 1 | 1 | 1 | 2 | 1 | 1 | 0 | |
86 37010 | 9598 | subspecies | PT | 5 | 1 | 1 | 1 | 2 | 1 | 1 | 0 | |
87 37011 | 9598 | subspecies | PT | 5 | 1 | 1 | 1 | 2 | 1 | 1 | 0 | |
88 37012 | 9598 | subspecies | PT | 5 | 1 | 1 | 1 | 2 | 1 | 1 | 0 | |
94 46359 | 9593 | subspecies | GG | 5 | 1 | 1 | 1 | 2 | 1 | 1 | 0 | |
100 63221 | 9606 | subspecies | HS | 5 | 1 | 1 | 1 | 2 | 1 | 1 | 0 | |
106 91950 | 9598 | subspecies | PT | 5 | 1 | 1 | 1 | 2 | 1 | 1 | 0 | |
[all …]
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/readers/unit_test/alnreader_test_cases/
H A Drw-855.aln221 >[org=Eclectus roratus] [subspecies=roratus]
230 >[org=Psittacula krameri] [subspecies=manillensis] [haplotype=1]
231 >[org=Psittacula krameri] [subspecies=manillensis] [haplotype=2]
232 >[org=Psittacula krameri] [subspecies=manillensis] [haplotype=3]
234 >[org=Psittacula krameri] [subspecies=krameri] [haplotype=2]
236 >[org=Psittacula krameri] [subspecies=borealis]
237 >[org=Psittacula krameri] [subspecies=krameri] [haplotype=1]
/dports/graphics/digikam/digikam-7.4.0/core/dplugins/generic/webservices/inaturalist/
H A Dinattaxon.cpp130 static const QString subspecies = QLatin1String("subspecies"); in htmlName() local
136 if ((rank() != species) && (rank() != subspecies) && (rank() != variety)) in htmlName()
142 if ((rank() == subspecies) || (rank() == variety) || (rank() == hybrid)) in htmlName()
150 QString txt = (rank() == subspecies) ? QLatin1String(" ssp. ") in htmlName()
/dports/biology/emboss/EMBOSS-6.6.0/emboss/data/TAXONOMY/
H A Dnodes.dmp126 161 | 160 | subspecies | TP | 0 | 1 | 11 | 1 | 0 | 1 | 1 | 0 | |
133 168 | 160 | subspecies | TP | 0 | 1 | 11 | 1 | 0 | 1 | 1 | 0 | |
259 333 | 587753 | subspecies | PC | 0 | 1 | 11 | 1 | 0 | 1 | 1 | 0 | |
435 555 | 554 | subspecies | PC | 0 | 1 | 11 | 1 | 0 | 1 | 1 | 0 | |
449 574 | 573 | subspecies | KP | 0 | 1 | 11 | 1 | 0 | 1 | 1 | 0 | |
516 658 | 553611 | subspecies | PL | 0 | 1 | 11 | 1 | 0 | 1 | 1 | 0 | |
635 834 | 833 | subspecies | FS | 0 | 1 | 11 | 1 | 0 | 1 | 1 | 0 | |
1057 1359 | 1358 | subspecies | LL | 0 | 1 | 11 | 1 | 0 | 1 | 1 | 0 | |
1058 1360 | 1358 | subspecies | LL | 0 | 1 | 11 | 1 | 0 | 1 | 1 | 0 | |
1149 1477 | 1464 | subspecies | PL | 0 | 1 | 11 | 1 | 0 | 1 | 1 | 0 | |
[all …]
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/readers/unit_test/mod_adder_test_cases/
H A Drw672c.mods9 subspecies subspecies
H A Drw672c.asn52 subname "subspecies"
/dports/biology/p5-BioPerl/BioPerl-1.7.7/t/data/taxdump/
H A Dnodes.dmp110 95265 | 91432 | subspecies | PO | 1 | 1 | 1 | 1 | 5 | 1 | 1 | 0 | |
111 95266 | 91443 | subspecies | RR | 1 | 1 | 1 | 1 | 5 | 1 | 1 | 0 | |
119 96045 | 53432 | subspecies | NU | 0 | 1 | 11 | 1 | 0 | 1 | 1 | 0 | |
/dports/biology/emboss/EMBOSS-6.6.0/doc/programs/master/emboss/apps/inc/
H A Dtaxgetrank.usage33 subspecies : Subspecies
77 subspecies : Subspecies
121 subspecies : Subspecies
H A Dtaxgetrank.ihelp22 subspecies (Subspecies); subtribe
/dports/math/py-yt/yt-4.0.1/yt/frontends/artio/artio_headers/
H A Dartio.h405 int artio_particle_write_particle(artio_fileset *handle, int64_t pid, int subspecies,
439 int artio_particle_read_particle(artio_fileset *handle, int64_t *pid, int *subspecies,
446 int species, int subspecies, int64_t pid,
H A Dartio_particle.c757 int artio_particle_write_particle(artio_fileset *handle, int64_t pid, int subspecies, in artio_particle_write_particle() argument
783 ret = artio_file_fwrite(phandle->ffh[phandle->cur_file], &subspecies, 1, ARTIO_TYPE_INT); in artio_particle_write_particle()
839 int artio_particle_read_particle(artio_fileset *handle, int64_t * pid, int *subspecies, in artio_particle_read_particle() argument
864 ret = artio_file_fread(phandle->ffh[phandle->cur_file], subspecies, 1, ARTIO_TYPE_INT); in artio_particle_read_particle()
1051 int subspecies; in artio_particle_read_sfc_range_species() local
1125 &subspecies, in artio_particle_read_sfc_range_species()
1135 callback(sfc, species, subspecies, in artio_particle_read_sfc_range_species()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objects/general/
H A DDbtag.cpp783 string subspecies; in GetUrl() local
789 subspecies = taxname_parts[2]; in GetUrl()
792 return GetUrl( genus, species, subspecies ); in GetUrl()
801 const string & subspecies) const in GetUrl()
987 if( ! subspecies.empty() ) { in GetUrl()
988 taxname_url_piece += "+" + subspecies; in GetUrl()
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objects/general/
H A DDbtag.cpp783 string subspecies; in GetUrl() local
789 subspecies = taxname_parts[2]; in GetUrl()
792 return GetUrl( genus, species, subspecies ); in GetUrl()
801 const string & subspecies) const in GetUrl()
987 if( ! subspecies.empty() ) { in GetUrl()
988 taxname_url_piece += "+" + subspecies; in GetUrl()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objects/seqfeat/
H A DOrg_ref.cpp246 bool COrg_ref::IsSubspeciesValid(const string& subspecies) const in IsSubspeciesValid()
248 if (NStr::IsBlank(subspecies)) { in IsSubspeciesValid()
252 if (s_FindWholeWord(taxname, subspecies)) { in IsSubspeciesValid()
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objects/seqfeat/
H A DOrg_ref.cpp246 bool COrg_ref::IsSubspeciesValid(const string& subspecies) const in IsSubspeciesValid()
248 if (NStr::IsBlank(subspecies)) { in IsSubspeciesValid()
252 if (s_FindWholeWord(taxname, subspecies)) { in IsSubspeciesValid()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/objects/seqfeat/
H A DOrg_ref.hpp131 bool IsSubspeciesValid(const string& subspecies) const;
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/objects/seqfeat/
H A DOrg_ref.hpp131 bool IsSubspeciesValid(const string& subspecies) const;
/dports/biology/diamond/diamond-2.0.13/src/data/
H A Dtaxonomy_nodes.h40 …forma = 33, varietas = 32, subspecies = 31, species = 30, species_subgroup = 29, species_group = 2… enumerator
/dports/biology/emboss/EMBOSS-6.6.0/emboss/acd/
H A Dtaxgetrank.acd59 subspecies:Subspecies;
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/objects/general/
H A DDbtag.hpp321 const string & subspecies = kEmptyStr ) const;
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/objects/general/
H A DDbtag.hpp321 const string & subspecies = kEmptyStr ) const;
/dports/biology/ncbi-toolkit/ncbi/network/taxon1/taxon2/
H A Dtc2proc.c997 bName->subspecies= StringSave(strTail(subspec->node_label, spec->node_label)); in binomialName()
1000 bName->subspecies= NULL; in binomialName()
1013 bName->subspecies= StringSave(strTail(subspec->node_label, genus->node_label)); in binomialName()
1021 bName->subspecies= NULL; in binomialName()
1530 dst->subspecies= (src->subspecies != NULL)? StringSave(src->subspecies) : NULL; in copyBinomial()
/dports/databases/p5-SQL-Translator/SQL-Translator-1.62/t/data/access/
H A Dgdpdm.ddl181 subspecies Text (50),
/dports/devel/py-inflect/inflect-5.3.0/
H A DCHANGES.rst151 * merge in 'subspecies' fix by UltraNurd
/dports/games/pcgen/pcgen/data/3e/fantasy_flight_games/dragonstar/starfarers_handbook/
H A Dstarfarershb_templates.lst28 # Star and Space dragon are new subspecies.

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