| /dports/biology/p5-Bio-Phylo/Bio-Phylo-v2.0.1/t/ |
| H A D | 18-taxlist.t | 16 taxon3
28 '-string' => 'taxon1,taxon2,taxon3,taxon4',
36 taxon3
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| H A D | 52-replicate-dna.t | 43 >taxon3
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| H A D | 34-json.t | 23 $p->insert(parse('-format'=>'newick','-string'=>'((taxon1,taxon2),taxon3);'));
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/edit/ |
| H A D | autodef_with_tax.cpp | 129 CTaxon3 taxon3; in GetDocsumOrgDescription() local
130 taxon3.Init(); in GetDocsumOrgDescription()
131 CRef<CTaxon3_reply> reply = taxon3.SendRequest(request); in GetDocsumOrgDescription()
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| H A D | source_edit.cpp | 170 CTaxon3 taxon3; in MakeCommonBioSource() local
171 taxon3.Init(); in MakeCommonBioSource()
181 CRef<CTaxon3_reply> reply = taxon3.SendOrgRefList(rq_list); in MakeCommonBioSource()
214 CRef<CTaxon3_reply> reply = taxon3.SendRequest(request); in MakeCommonBioSource()
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| H A D | mail_report.cpp | 120 CTaxon3 taxon3; in MakeMailReportPostReport() local
121 taxon3.Init(); in MakeMailReportPostReport()
122 CRef<CTaxon3_reply> reply = taxon3.SendOrgRefList(org_ref_list); in MakeMailReportPostReport()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/edit/ |
| H A D | autodef_with_tax.cpp | 129 CTaxon3 taxon3; in GetDocsumOrgDescription() local
130 taxon3.Init(); in GetDocsumOrgDescription()
131 CRef<CTaxon3_reply> reply = taxon3.SendRequest(request); in GetDocsumOrgDescription()
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| H A D | source_edit.cpp | 170 CTaxon3 taxon3; in MakeCommonBioSource() local
171 taxon3.Init(); in MakeCommonBioSource()
181 CRef<CTaxon3_reply> reply = taxon3.SendOrgRefList(rq_list); in MakeCommonBioSource()
214 CRef<CTaxon3_reply> reply = taxon3.SendRequest(request); in MakeCommonBioSource()
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| H A D | mail_report.cpp | 120 CTaxon3 taxon3; in MakeMailReportPostReport() local
121 taxon3.Init(); in MakeMailReportPostReport()
122 CRef<CTaxon3_reply> reply = taxon3.SendOrgRefList(org_ref_list); in MakeMailReportPostReport()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/validator/ |
| H A D | tax_validation_and_cleanup.cpp | 1229 CTaxon3 taxon3; in DoTaxonomyUpdate() local
1230 taxon3.Init(); in DoTaxonomyUpdate()
1329 CTaxon3 taxon3; in FixOneSpecificHost() local
1330 taxon3.Init(); in FixOneSpecificHost()
1370 CTaxon3 taxon3; in IsOneSpecificHostValid() local
1371 taxon3.Init(); in IsOneSpecificHostValid()
1406 CTaxon3 taxon3; in CheckOneOrg() local
1407 taxon3.Init(); in CheckOneOrg()
1415 CRef<CTaxon3_reply> reply = taxon3.SendOrgRefList(org_rq_list); in CheckOneOrg()
1430 reply = taxon3.SendOrgRefList(org_rq_list); in CheckOneOrg()
[all …]
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| /dports/biology/python-nexus/python-nexus-1.63/ |
| H A D | PKG-INFO | 86 >>> n.add('taxon3', 'Character1', 'A')
91 >>> n.add('taxon3', 2, 3)
95 >>> n.add('taxon3', "Char3", '4')
|
| /dports/biology/python-nexus/python-nexus-1.63/python_nexus.egg-info/ |
| H A D | PKG-INFO | 86 >>> n.add('taxon3', 'Character1', 'A')
91 >>> n.add('taxon3', 2, 3)
95 >>> n.add('taxon3', "Char3", '4')
|
| /dports/biology/ncbi-toolkit/ncbi/access/ |
| H A D | makeacc.unx | 10 asntool -m taxon3.asn -o asntax3.h
12 asntool -m taxon3.asn -M ../asn/seqfeat.asn,../asn/seqloc.asn,../asn/general.asn,../asn/pub.asn,../…
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objects/taxon3/ |
| H A D | taxon3.module | 1 MODULE_PATH = objects/taxon3
|
| H A D | Makefile.in | 3 ASN_PROJ = taxon3
|
| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objects/taxon3/ |
| H A D | taxon3.module | 1 MODULE_PATH = objects/taxon3
|
| H A D | Makefile.in | 3 ASN_PROJ = taxon3
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/misc/discrepancy/unit_test/ |
| H A D | Makefile.unit_test_discrepancy.app | 12 LIB = xdiscrepancy xcleanup xobjutil $(OBJEDIT_LIBS) taxon3 valid test_boost macro $(SEQ_LIBS) $(OB…
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/speedtest/ |
| H A D | Makefile.speedtest.app | 11 LIB = prosplign xalgoalignutil taxon1 xalgoseq xcleanup xobjedit taxon3 valid valerr \
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objects/ |
| H A D | Makefile.in | 12 omssa remap seqtest taxon1 taxon3 gbproj trackmgr valerr valid \
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| H A D | Makefile.sources | 17 seqfeat seqloc seqsplit seqres seqset submit taxon1 taxon3 tinyseq \
|
| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objects/ |
| H A D | Makefile.in | 12 omssa remap seqtest taxon1 taxon3 gbproj trackmgr valerr valid \
|
| H A D | Makefile.sources | 17 seqfeat seqloc seqsplit seqres seqset submit taxon1 taxon3 tinyseq \
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/id_mapper/app/ |
| H A D | Makefile.id_mapper_app.app | 34 taxon3 taxon1 xcgi xthrserv xregexp $(PCRE_LIB) $(OBJMGR_LIBS)
|
| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/scripts/projects/pubseq_gateway/ |
| H A D | project.lst | 76 objects/taxon3$
|