/dports/science/xtb/xtb-6.4.1/src/ |
H A D | restart.f90 | 122 read(ich) topo%nbond,topo%nangl,topo%ntors,topo%nathbH,topo%nathbAB, & 123 & topo%natxbAB,topo%nbatm,topo%nfrag,topo%nsystem,topo%maxsystem 128 read(ich) topo%nb,topo%bpair,topo%blist,topo%alist, & 129 & topo%tlist,topo%b3list,topo%fraglist,topo%hbatHl,topo%hbatABl, & 133 & topo%gameeq,topo%alpeeq,topo%alphanb,topo%qa, & 188 & topo%nathbH,topo%nathbAB,topo%natxbAB,topo%nbatm,topo%nfrag,topo%nsystem, & 190 …write(ich) topo%nbond_blist,topo%nbond_vbond,topo%nangl_alloc,topo%ntors_alloc,topo%bond_hb_nr,top… 192 write(ich) topo%nb,topo%bpair,topo%blist,topo%alist,topo%tlist,topo%b3list, & 193 … & topo%fraglist,topo%hbatHl,topo%hbatABl,topo%xbatABl,topo%ispinsyst,topo%nspinsyst, & 196 …write(ich) topo%vbond,topo%vangl,topo%vtors,topo%chieeq,topo%gameeq,topo%alpeeq,topo%alphanb,topo%… [all …]
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/dports/net-p2p/c-lightning/lightning-0.10.2/lightningd/ |
H A D | chaintopology.c | 45 topo->extend_timer = new_reltimer(topo->ld->timers, topo, in next_topology_timer() 305 notleak(watch_txid(topo, topo, NULL, in watch_for_utxo_reconfirmation() 585 topo->updatefee_timer = new_reltimer(topo->ld->timers, topo, in next_updatefee_timer() 632 topo->prev_tip = topo->tip->blkid; in updates_complete() 935 add_tip(topo, new_block(topo, blk, topo->tip->height + 1)); in get_new_block() 955 topo->root = new_block(topo, blk, topo->max_blockheight); in init_topo() 956 block_map_add(&topo->block_map, topo->root); in init_topo() 957 topo->tip = topo->root; in init_topo() 958 topo->prev_tip = topo->tip->blkid; in init_topo() 974 if (topo->tip->height > topo->headercount) in get_network_blockheight() [all …]
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/dports/science/agrum/aGrUM-29e540d8169268e8fe5d5c69bc4b2b1290f12320/src/testunits/module_BN/ |
H A D | VariableNodeMapTestSuite.h | 119 TS_ASSERT(topo.empty()) in testEraseVar() 123 fill(topo, idList); in testEraseVar() 125 TS_ASSERT(!topo.empty()) in testEraseVar() 134 topo.erase(i); in testEraseVar() 136 TS_ASSERT(topo.empty()) in testEraseVar() 150 TS_ASSERT(topo.empty()) in testEraseArc() 154 fill(topo, idList); in testEraseArc() 156 TS_ASSERT(!topo.empty()) in testEraseArc() 171 TS_ASSERT(!topo.empty()) in testEraseArc() 188 fill(topo, idList); in testMoralGraph() [all …]
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/dports/net/openmpi3/openmpi-3.1.6/ompi/mca/topo/base/ |
H A D | topo_base_dist_graph_create_adjacent.c | 58 topo->in = topo->inw = NULL; in mca_topo_base_dist_graph_create_adjacent() 59 topo->out = topo->outw = NULL; in mca_topo_base_dist_graph_create_adjacent() 65 topo->in = (int*)malloc(sizeof(int) * topo->indegree); in mca_topo_base_dist_graph_create_adjacent() 69 memcpy(topo->in, sources, sizeof(int) * topo->indegree); in mca_topo_base_dist_graph_create_adjacent() 71 topo->inw = (int*)malloc(sizeof(int) * topo->indegree); in mca_topo_base_dist_graph_create_adjacent() 80 topo->out = (int*)malloc(sizeof(int) * topo->outdegree); in mca_topo_base_dist_graph_create_adjacent() 84 memcpy(topo->out, destinations, sizeof(int) * topo->outdegree); in mca_topo_base_dist_graph_create_adjacent() 106 if( NULL != topo->in ) free(topo->in); in mca_topo_base_dist_graph_create_adjacent() 108 if( NULL != topo->inw ) free(topo->inw); in mca_topo_base_dist_graph_create_adjacent() 110 if( NULL != topo->out ) free(topo->out); in mca_topo_base_dist_graph_create_adjacent() [all …]
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/dports/net/openmpi/openmpi-4.1.1/ompi/mca/topo/base/ |
H A D | topo_base_dist_graph_create_adjacent.c | 58 topo->in = topo->inw = NULL; in mca_topo_base_dist_graph_create_adjacent() 59 topo->out = topo->outw = NULL; in mca_topo_base_dist_graph_create_adjacent() 65 topo->in = (int*)malloc(sizeof(int) * topo->indegree); in mca_topo_base_dist_graph_create_adjacent() 69 memcpy(topo->in, sources, sizeof(int) * topo->indegree); in mca_topo_base_dist_graph_create_adjacent() 71 topo->inw = (int*)malloc(sizeof(int) * topo->indegree); in mca_topo_base_dist_graph_create_adjacent() 80 topo->out = (int*)malloc(sizeof(int) * topo->outdegree); in mca_topo_base_dist_graph_create_adjacent() 84 memcpy(topo->out, destinations, sizeof(int) * topo->outdegree); in mca_topo_base_dist_graph_create_adjacent() 106 if( NULL != topo->in ) free(topo->in); in mca_topo_base_dist_graph_create_adjacent() 108 if( NULL != topo->inw ) free(topo->inw); in mca_topo_base_dist_graph_create_adjacent() 110 if( NULL != topo->out ) free(topo->out); in mca_topo_base_dist_graph_create_adjacent() [all …]
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/dports/net/py-mpi4py/mpi4py-3.1.3/test/ |
H A D | test_comm_topo.py | 28 self.assertEqual(coordinates, topo.Get_coords(topo.rank)) 75 topo.Free() 91 topo.Free() 110 topo.Free() 138 topo.Free() 147 topo.Free() 152 topo.Free() 156 topo.Free() 161 topo.Free() 184 topo.Free() [all …]
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/dports/biology/protomol/protomol/applications/iSGProtomol-app/integrators/ |
H A D | ModifierISG.cpp | 158 string atom1(topo->atomTypes[topo->atoms[I].type].name); in indexBonds() 159 string atom2(topo->atomTypes[topo->atoms[J].type].name); in indexBonds() 191 string atom1 = topo->atomTypes[topo->atoms[I].type].name; in indexBonds() 192 string atom2 = topo->atomTypes[topo->atoms[J].type].name; in indexBonds() 193 string atom3 = topo->atomTypes[topo->atoms[K].type].name; in indexBonds() 230 string atom1 = topo->atomTypes[topo->atoms[I].type].name; in indexBonds() 231 string atom2 = topo->atomTypes[topo->atoms[J].type].name; in indexBonds() 232 string atom3 = topo->atomTypes[topo->atoms[K].type].name; in indexBonds() 233 string atom4 = topo->atomTypes[topo->atoms[L].type].name; in indexBonds() 272 string atom1 = topo->atomTypes[topo->atoms[I].type].name; in indexBonds() [all …]
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/dports/science/xtb/xtb-6.4.1/src/gfnff/ |
H A D | gfnff_ini.f90 | 248 topo%nbond = sum(topo%bpair) 249 topo%nbond_blist = topo%nbond 474 topo%qfrag(2:topo%nfrag)=0 507 call goedeckera(env,mol%n,mol%at,topo%nb,rtmp,topo%qa,ees,topo) 1004 topo%nbond_vbond = topo%nbond 1357 fqq=1.0d0-(topo%qa(ii)*topo%qa(jj)+topo%qa(ii)*topo%qa(kk))*gen%qfacBEN*2.5 1571 topo%ntors=topo%ntors+topo%nb(20,ii)*topo%nb(20,jj)*2 ! upper limit 1732 …& ii,jj,kk,ll,topo%tlist(5,topo%ntors),rings,topo%vtors(1,topo%ntors)*180./pi,phi*180./… 1754 …& ii,jj,kk,ll,topo%tlist(5,topo%ntors),rings,topo%vtors(1,topo%ntors)*180./pi,phi*180./… 1772 topo%ntors=topo%ntors+1 [all …]
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H A D | gfnff_setup.f90 | 144 topo%nfrag = maxval(topo%fraglist) 145 if (.not.allocated(topo%qpdb)) allocate(topo%qpdb(mol%n)) 147 topo%qfrag(topo%fraglist(iatom)) = topo%qfrag(topo%fraglist(iatom)) & 151 ichrg=idint(sum(topo%qfrag(1:topo%nfrag))) 157 topo%nb=0 158 topo%nfrag=0 163 ni=topo%nb(20,i) 172 topo%nb(20,i)=topo%nb(20,i)+1 173 topo%nb(topo%nb(20,i),i)=j 174 topo%nb(20,j)=topo%nb(20,j)+1 [all …]
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/dports/biology/protomol/protomol/framework/topology/ |
H A D | buildCellLists.cpp | 13 topo->cellManager.initialize(topo->cellLists,topo->min,topo->max,true); in buildCellLists() 14 Vector3D delta(topo->boundaryConditions.origin()-topo->min); in buildCellLists() 19 myCell=topo->cellManager.findCell(delta+ in buildCellLists() 25 topo->atoms[i].cellListNext=-1; in buildCellLists() 26 topo->cellLists[myCell]=i; in buildCellLists() 32 topo->cellManager.updateCache(topo->cellLists); in buildCellLists() 38 topo->cellManager.initialize(topo->cellLists,topo->min,topo->max,false); in buildCellLists() 39 Vector3D delta(topo->boundaryConditions.origin()-topo->min); in buildCellLists() 49 topo->atoms[i].cellListNext=-1; in buildCellLists() 50 topo->cellLists[myCell]=i; in buildCellLists() [all …]
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/dports/math/moab/fathomteam-moab-7bde9dfb84a8/src/mesquite/Mesh/ |
H A D | TopologyInfo.hpp | 45 { return topo > MIXED ? 0 : instance.longNames[topo]; } in name() 47 { return topo > MIXED ? 0 : instance.shortNames[topo]; } in short_name() 51 { return topo >= MIXED ? 0: instance.dimMap[topo]; } in dimension() 59 { return (topo >= MIXED) ? 0 : instance.adjMap[topo][dimension]; } in adjacent() 68 static unsigned sides( EntityTopology topo ) in sides() argument 69 { return (topo >= MIXED || instance.dimMap[topo] < 1) ? 0 : in sides() 70 instance.adjMap[topo][instance.dimMap[topo]-1]; } in sides() 79 { return adjacent(topo, 0); } in corners() 82 static unsigned edges( EntityTopology topo ) in edges() argument 83 { return adjacent(topo, 1); } in edges() [all …]
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/dports/sysutils/cpufetch/cpufetch-1.00/src/x86/ |
H A D | apic.c | 127 topo->apic->pkg_mask_shift += topo->apic->smt_mask_width; in fill_topo_masks_apic() 128 topo->apic->core_mask <<= topo->apic->smt_mask_width; in fill_topo_masks_apic() 129 topo->apic->pkg_mask = (-1) ^ (topo->apic->core_mask | topo->apic->smt_mask); in fill_topo_masks_apic() 179 topo->apic->core_mask = coreplus_smt_mask ^ topo->apic->smt_mask; in fill_topo_masks_x2apic() 183 topo->apic->pkg_mask_shift = topo->apic->smt_mask_width; in fill_topo_masks_x2apic() 184 topo->apic->pkg_mask = (-1) ^ topo->apic->smt_mask; in fill_topo_masks_x2apic() 228 topo->sockets++; in build_topo_from_apic() 233 topo->logical_cores = topo->total_cores / topo->sockets; in build_topo_from_apic() 234 topo->physical_cores = topo->logical_cores / topo->smt_available; in build_topo_from_apic() 408 topo->smt_supported = topo->smt_available; in get_topology_from_apic() [all …]
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/dports/net/mpich2/mpich2-1.5/src/mpi/topo/ |
H A D | Makefile.mk | 8 src/mpi/topo/cart_coords.c \ 9 src/mpi/topo/cart_create.c \ 10 src/mpi/topo/cart_get.c \ 11 src/mpi/topo/cart_map.c \ 12 src/mpi/topo/cart_rank.c \ 13 src/mpi/topo/cart_shift.c \ 14 src/mpi/topo/cart_sub.c \ 15 src/mpi/topo/dims_create.c \ 37 src/mpi/topo/nhb_alltoallw.c 40 src/mpi/topo/topoutil.c [all …]
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/dports/devel/librttopo/librttopo-1.1.0/headers/ |
H A D | librttopo.h | 203 const RTT_BE_TOPOLOGY* topo, 228 const RTT_BE_TOPOLOGY* topo, 247 const RTT_BE_TOPOLOGY* topo, 269 const RTT_BE_TOPOLOGY* topo, 294 const RTT_BE_TOPOLOGY* topo, 310 const RTT_BE_TOPOLOGY* topo 327 const RTT_BE_TOPOLOGY* topo, 351 const RTT_BE_TOPOLOGY* topo, 374 const RTT_BE_TOPOLOGY* topo, 389 const RTT_BE_TOPOLOGY* topo, [all …]
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/dports/databases/postgis25/postgis-2.5.5/liblwgeom/ |
H A D | liblwgeom_topo.h | 203 const LWT_BE_TOPOLOGY* topo, 229 const LWT_BE_TOPOLOGY* topo, 249 const LWT_BE_TOPOLOGY* topo, 271 const LWT_BE_TOPOLOGY* topo, 296 const LWT_BE_TOPOLOGY* topo, 312 const LWT_BE_TOPOLOGY* topo 330 const LWT_BE_TOPOLOGY* topo, 354 const LWT_BE_TOPOLOGY* topo, 377 const LWT_BE_TOPOLOGY* topo, 392 const LWT_BE_TOPOLOGY* topo, [all …]
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/dports/net-mgmt/spectools/spectools-2011-08-R1/ |
H A D | spectool_gtk_topo.c | 95 SpectoolTopo *topo; in spectool_topo_draw() local 107 if (topo->sch == 0 || topo->scw == 0) { in spectool_topo_draw() 108 printf("debug - sch or scw 0? %d %d\n", topo->sch, topo->scw); in spectool_topo_draw() 132 ((float) (topo->sample_counts[(samp * topo->sch) + db] * 1.5f) / in spectool_topo_draw() 136 if (cpos > topo->colormap_len) cpos = topo->colormap_len - 1; in spectool_topo_draw() 180 if (topo->sweep_count_num > 0 && topo->sweep_peak_max > 0) { in spectool_topo_update() 270 topo->scw = in spectool_topo_wdr_sweep() 274 malloc(sizeof(unsigned int) * topo->sch * topo->scw); in spectool_topo_wdr_sweep() 277 sizeof(unsigned int) * topo->sch * topo->scw); in spectool_topo_wdr_sweep() 288 sizeof(unsigned int) * topo->sch * topo->scw); in spectool_topo_wdr_sweep() [all …]
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/dports/databases/postgis32/postgis-3.2.0/liblwgeom/ |
H A D | liblwgeom_topo.h | 298 const LWT_BE_TOPOLOGY* topo 335 const LWT_BE_TOPOLOGY* topo, 378 const LWT_BE_TOPOLOGY* topo, 394 const LWT_BE_TOPOLOGY* topo, 481 const LWT_BE_TOPOLOGY* topo, 502 const LWT_BE_TOPOLOGY* topo, 533 const LWT_BE_TOPOLOGY* topo, 663 const LWT_BE_TOPOLOGY* topo 670 const LWT_BE_TOPOLOGY* topo 678 const LWT_BE_TOPOLOGY* topo [all …]
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/dports/sysutils/cpufetch/cpufetch-1.00/src/ppc/ |
H A D | ppc.c | 81 topo->sockets++; in get_topology_info() 97 topo->physical_cores++; in get_topology_info() 102 topo->physical_cores = topo->physical_cores / topo->sockets; // only count cores on one socket in get_topology_info() 103 topo->logical_cores = topo->total_cores / topo->sockets; // only count threads on one socket in get_topology_info() 104 topo->smt_supported = topo->logical_cores / topo->physical_cores; in get_topology_info() 111 return topo; in get_topology_info() 147 int64_t flops = topo->physical_cores * topo->sockets * (freq * 1000000); in get_peak_performance() 154 int threads_per_core = topo->logical_cores / topo->physical_cores; in get_peak_performance() 201 if(topo->smt_supported > 1) { in get_str_topology() 205 …intf(string, size, "%d cores (%d threads)", topo->physical_cores * topo->sockets, topo->logical_co… in get_str_topology() [all …]
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/dports/databases/spatialite/libspatialite-5.0.1/src/topology/ |
H A D | gaia_topostmts.c | 95 if (topo == NULL) in do_create_stmt_getNodeWithinDistance2D() 133 if (topo == NULL) in do_create_stmt_getNodeWithinBox2D() 169 if (topo == NULL) in do_create_stmt_insertNodes() 204 if (topo == NULL) in do_create_stmt_getEdgeWithinDistance2D() 242 if (topo == NULL) in do_create_stmt_getEdgeWithinBox2D() 279 if (topo == NULL) in do_create_stmt_getAllEdges() 313 if (topo == NULL) in do_create_stmt_getFaceContainingPoint_1() 348 if (topo == NULL) in do_create_stmt_getFaceContainingPoint_2() 381 if (topo == NULL) in do_create_stmt_insertEdges() 415 if (topo == NULL) in do_create_stmt_getNextEdgeId() [all …]
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/dports/databases/postgis30/postgis-3.0.4/liblwgeom/ |
H A D | liblwgeom_topo.h | 298 const LWT_BE_TOPOLOGY* topo 335 const LWT_BE_TOPOLOGY* topo, 370 const LWT_BE_TOPOLOGY* topo, 393 const LWT_BE_TOPOLOGY* topo, 409 const LWT_BE_TOPOLOGY* topo, 496 const LWT_BE_TOPOLOGY* topo, 517 const LWT_BE_TOPOLOGY* topo, 548 const LWT_BE_TOPOLOGY* topo, 678 const LWT_BE_TOPOLOGY* topo 685 const LWT_BE_TOPOLOGY* topo [all …]
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/dports/databases/postgis31/postgis-3.1.4/liblwgeom/ |
H A D | liblwgeom_topo.h | 298 const LWT_BE_TOPOLOGY* topo 335 const LWT_BE_TOPOLOGY* topo, 370 const LWT_BE_TOPOLOGY* topo, 393 const LWT_BE_TOPOLOGY* topo, 409 const LWT_BE_TOPOLOGY* topo, 496 const LWT_BE_TOPOLOGY* topo, 517 const LWT_BE_TOPOLOGY* topo, 548 const LWT_BE_TOPOLOGY* topo, 678 const LWT_BE_TOPOLOGY* topo 685 const LWT_BE_TOPOLOGY* topo [all …]
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/dports/biology/protomol/protomol/applications/iSGProtomol-app/frontend/ |
H A D | buildISGTopology.cpp | 125 topo->degreesOfFreedom = 3 * topo->atoms.size() - 3; in buildISGTopology() 154 string bond1(topo->atomTypes[topo->atoms[atom1].type].name); in buildISGTopology() 155 string bond2(topo->atomTypes[topo->atoms[atom2].type].name); in buildISGTopology() 220 string angle1(topo->atomTypes[topo->atoms[atom1].type].name); in buildISGTopology() 221 string angle2(topo->atomTypes[topo->atoms[atom2].type].name); in buildISGTopology() 222 string angle3(topo->atomTypes[topo->atoms[atom3].type].name); in buildISGTopology() 356 topo->dihedrals[topo->dihedrals.size()-1].atom1 != atom1 || in buildISGTopology() 357 topo->dihedrals[topo->dihedrals.size()-1].atom2 != atom2 || in buildISGTopology() 358 topo->dihedrals[topo->dihedrals.size()-1].atom3 != atom3 || in buildISGTopology() 359 topo->dihedrals[topo->dihedrals.size()-1].atom4 != atom4){ in buildISGTopology() [all …]
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/dports/net/frr7-pythontools/frr-frr-7.5.1/tests/topotests/lib/ |
H A D | topojson.py | 48 def build_topo_from_json(tgen, topo): argument 67 if "ipv4base" in topo: 70 if topo["link_ip_start"]["v4mask"] < 32: 72 if "ipv6base" in topo: 75 if topo["link_ip_start"]["v6mask"] < 127: 78 topo["routers"][router]["nextIfname"] = 0 83 if "links" in topo["routers"][curRouter]: 105 topo["lo_prefix"]["ipv4"], 115 topo["lo_prefix"]["ipv6"], 216 data = topo["routers"] [all …]
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/dports/net/frr7/frr-frr-7.5.1/tests/topotests/lib/ |
H A D | topojson.py | 48 def build_topo_from_json(tgen, topo): argument 67 if "ipv4base" in topo: 70 if topo["link_ip_start"]["v4mask"] < 32: 72 if "ipv6base" in topo: 75 if topo["link_ip_start"]["v6mask"] < 127: 78 topo["routers"][router]["nextIfname"] = 0 83 if "links" in topo["routers"][curRouter]: 105 topo["lo_prefix"]["ipv4"], 115 topo["lo_prefix"]["ipv6"], 216 data = topo["routers"] [all …]
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/dports/biology/protomol/protomol/applications/iSGProtomol-app/forces/ |
H A D | iSGLennardJonesForce.h | 141 if (topo->atoms[atom1].type <= topo->atoms[atom2].type) { in operator() 152 if (topo->atoms[atom1].type <= topo->atoms[atom2].type) i = topo->molecules[M1].newtype; in operator() 160 if (topo->atoms[atom1].type <= topo->atoms[atom2].type) j = topo->molecules[M2].newtype; in operator() 166 params = topo->isgLJParms(i,j,topo->atoms[atom1].type,topo->atoms[atom2].type); in operator() 228 if (topo->atoms[atom1].type <= topo->atoms[atom2].type) { in operator() 245 if (topo->atoms[atom1].type <= topo->atoms[atom2].type) { in operator() 259 params_old = topo->isgLJParms(i,j,topo->atoms[atom1].type,topo->atoms[atom2].type); in operator() 263 if (topo->atoms[atom1].type <= topo->atoms[atom2].type) i = type1_new; in operator() 271 params_new = topo->isgLJParms(i,j,topo->atoms[atom1].type,topo->atoms[atom2].type); in operator() 347 params_old = topo->isgLJParms(j,j,topo->atoms[atom1].type,topo->atoms[atom2].type); in operator() [all …]
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