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/dports/biology/fasttree/FastTree-2.1.10_5/
H A DFastTree-2.1.10.c878 double treeLogLkDelta = 0.1; /* Give up if tree log-lk changes by less than this; NNIs that change variable
2318 bool bConverged = iRound > 1 && (dMaxChange < 0.001 || loglk < (dLastLogLk+treeLogLkDelta)); in main()
2354 …ConvergedHere = (iMLnni > 0) && ((loglk < lastloglk + treeLogLkDelta) || maxDelta < treeLogLkDelta in main()
6303 double supportThreshold = useML ? treeLogLkDelta : MEMinDelta; in NNI()
7206 …bool badSplit = loglk[choice] > loglk[ABvsCD] + treeLogLkDelta; /* ignore small changes in likelih… in TestSplitsML()