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Searched refs:trim_len (Results 1 – 25 of 64) sorted by relevance

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/dports/biology/sra-tools/sra-tools-2.11.0/ncbi-vdb/libs/sraxf/
H A Dspot-desc.c46 const uint32_t *trim_len = argv[4].u.data.base; in make_spot_desc() local
66 trim_len += argv[4].u.data.first_elem; in make_spot_desc()
67 assert( argv[4].u.data.elem_bits == (sizeof( *trim_len ) * 8 ) ); in make_spot_desc()
78 dst->clip_qual_right = (uint16_t)( trim_start[0]+trim_len[0] ); in make_spot_desc()
/dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/libs/sraxf/
H A Dspot-desc.c46 const uint32_t *trim_len = argv[4].u.data.base; in make_spot_desc() local
66 trim_len += argv[4].u.data.first_elem; in make_spot_desc()
67 assert( argv[4].u.data.elem_bits == (sizeof( *trim_len ) * 8 ) ); in make_spot_desc()
78 dst->clip_qual_right = (uint16_t)( trim_start[0]+trim_len[0] ); in make_spot_desc()
/dports/graphics/blender/blender-2.91.0/source/blender/blenlib/intern/
H A Drand.cc434 int64_t trim_len = r_bytes.size(); in get_bytes() local
436 if (trim_len > rand_stride) { in get_bytes()
437 last_len = trim_len % rand_stride; in get_bytes()
438 trim_len = trim_len - last_len; in get_bytes()
441 trim_len = 0; in get_bytes()
447 while (i != trim_len) { in get_bytes()
448 BLI_assert(i < trim_len); in get_bytes()
/dports/x11/foot/foot/
H A Dshm.c609 off_t trim_ofs, trim_len; in wrap_buffer() local
613 trim_len = new_offset; in wrap_buffer()
617 trim_len = pool->mmap_size - trim_ofs; in wrap_buffer()
623 trim_ofs, trim_len) < 0) in wrap_buffer()
695 const off_t trim_len = new_offset; in shm_scroll_forward() local
700 trim_ofs, trim_len) < 0) in shm_scroll_forward()
802 const off_t trim_len = pool->mmap_size - trim_ofs; in shm_scroll_reverse() local
807 trim_ofs, trim_len) < 0) in shm_scroll_reverse()
/dports/devel/arm-none-eabi-newlib/newlib-2.4.0/newlib/libc/sys/linux/net/
H A Dres_hconf.c643 size_t hostname_len, trim_len; in _res_hconf_trim_domain() local
652 trim_len = strlen (trim); in _res_hconf_trim_domain()
653 if (hostname_len > trim_len in _res_hconf_trim_domain()
654 && strcasecmp (&hostname[hostname_len - trim_len], trim) == 0) in _res_hconf_trim_domain()
656 hostname[hostname_len - trim_len] = '\0'; in _res_hconf_trim_domain()
/dports/net/kamailio/kamailio-5.4.5/src/modules/maxfwd/
H A Dmf_funcs.c59 trim_len(foo->len, foo->s, msg->maxforwards->body); in is_maxfwd_present()
64 trim_len(foo->len, foo->s, msg->maxforwards->body); in is_maxfwd_present()
/dports/biology/sra-tools/sra-tools-2.11.0/ncbi-vdb/interfaces/sra/
H A Dpacbio.vschema67 * need to find the 0-based trim_start and trim_len
75 INSDC:coord:len trim_len = ( INSDC:coord:len )
202 * need to find the 0-based trim_start and trim_len
213 INSDC:coord:len trim_len = ( INSDC:coord:len )
231 * need to find the 0-based trim_start and trim_len
237 INSDC:coord:len trim_len = ( INSDC:coord:len )
/dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/interfaces/sra/
H A Dpacbio.vschema67 * need to find the 0-based trim_start and trim_len
75 INSDC:coord:len trim_len = ( INSDC:coord:len )
202 * need to find the 0-based trim_start and trim_len
213 INSDC:coord:len trim_len = ( INSDC:coord:len )
231 * need to find the 0-based trim_start and trim_len
237 INSDC:coord:len trim_len = ( INSDC:coord:len )
/dports/net/kamailio/kamailio-5.4.5/src/core/
H A Dhash_func.c64 trim_len( ci_len, ci, call_id ); in new_hash()
65 trim_len( cs_len, cs, cseq_nr ); in new_hash()
/dports/biology/sra-tools/sra-tools-2.11.0/ncbi-vdb/interfaces/ncbi/
H A Dsra.vschema131 * "trim_len" [ DATA ] - the length of the trim segment
137 INSDC:coord:len trim_len, U8 num_reads );
309 trim_start, trim_len, out_nreads );
322 * trim_len
377 * trim_len
423 * trim_len
520 * trim_len
598 * trim_len
681 * trim_len
754 * trim_len
H A Dclip.vschema131 * need to find the 0-based trim_start and trim_len
145 INSDC:coord:len trim_len
/dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/interfaces/ncbi/
H A Dsra.vschema131 * "trim_len" [ DATA ] - the length of the trim segment
137 INSDC:coord:len trim_len, U8 num_reads );
309 trim_start, trim_len, out_nreads );
322 * trim_len
377 * trim_len
423 * trim_len
520 * trim_len
598 * trim_len
681 * trim_len
754 * trim_len
H A Dclip.vschema131 * need to find the 0-based trim_start and trim_len
145 INSDC:coord:len trim_len
/dports/biology/sra-tools/sra-tools-2.11.0/ncbi-vdb/libs/align/
H A Dwriter-ref.c246 INSDC_coord_len trim_len = len; in TableWriterRef_Write() local
259 while( trim_len > 0 && (*b == 'N' || *b == 'n' || *b == '.') ) { in TableWriterRef_Write()
260 trim_len--; b--; in TableWriterRef_Write()
263 …BUF(cself->base, cself->cols_data[ewrefd_cn_READ], data->read.buffer, (write_read ? trim_len : 0)); in TableWriterRef_Write()
266 if( trim_len == 0 ) { in TableWriterRef_Write()
267 TW_COL_WRITE_VAR(cself->base, cself->cols_data[ewrefd_cn_SEQ_START], trim_len); in TableWriterRef_Write()
/dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/libs/align/
H A Dwriter-ref.c246 INSDC_coord_len trim_len = len; in TableWriterRef_Write() local
259 while( trim_len > 0 && (*b == 'N' || *b == 'n' || *b == '.') ) { in TableWriterRef_Write()
260 trim_len--; b--; in TableWriterRef_Write()
263 …BUF(cself->base, cself->cols_data[ewrefd_cn_READ], data->read.buffer, (write_read ? trim_len : 0)); in TableWriterRef_Write()
266 if( trim_len == 0 ) { in TableWriterRef_Write()
267 TW_COL_WRITE_VAR(cself->base, cself->cols_data[ewrefd_cn_SEQ_START], trim_len); in TableWriterRef_Write()
/dports/net/kamailio/kamailio-5.4.5/src/core/parser/sdp/
H A Dsdp_helpr_funcs.c165 trim_len(rtpmap_payload->len, rtpmap_payload->s, *rtpmap_payload); in extract_rtpmap()
226 trim_len(fmtp_payload->len, fmtp_payload->s, *fmtp_payload); in extract_fmtp()
249 trim_len(fmtp_string->len, fmtp_string->s, *fmtp_string); in extract_fmtp()
338 trim_len(value->len, value->s, *value); in extract_field()
423 trim_len(bwtype->len, bwtype->s, *bwtype); in extract_bwidth()
459 trim_len(mediaip->len, mediaip->s, *mediaip); in extract_mediaip()
527 trim_len(mediaport->len, mediaport->s, *mediaport); in extract_media_attr()
/dports/biology/sra-tools/sra-tools-2.11.0/ncbi-vdb/test/vdb/
H A DSYS-224064.cpp163 uint32_t trim_len = 0; in LowLevelTest() local
176 trim_len = *static_cast<const uint32_t*>(data); in LowLevelTest()
/dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/test/vdb/
H A DSYS-224064.cpp163 uint32_t trim_len = 0; in LowLevelTest() local
176 trim_len = *static_cast<const uint32_t*>(data); in LowLevelTest()
/dports/net/kamailio/kamailio-5.4.5/src/core/crypto/
H A Dmd5utils.c60 trim_len( len, s, src[i] ); in MD5StringArray()
/dports/biology/sra-tools/sra-tools-2.11.0/ncbi-vdb/libs/sra/
H A Dreader-abi.c68 const INSDC_coord_len** trim_len; member
92 …a(&self->dad, &AbsolidReader_master_columns_desc[4], NULL, (const void***)&self->trim_len)) == 0 && in AbsolidReaderInit()
148 *spot_len = **self->trim_len; in AbsolidReader_SpotInfo()
233 INSDC_coord_zero trim_end = ((**self->trim_start) + (**self->trim_len)) - 1; in AbsolidReader_SpotReadInfo()
H A Dreader-fastq.c77 const INSDC_coord_len** trim_len; member
110 …ta(&self->dad, &FastqReader_master_columns_desc[6], NULL, (const void***)&self->trim_len)) == 0 ) { in FastqReaderInit()
177 *spot_len = **self->trim_len; in FastqReader_SpotInfo()
212 INSDC_coord_zero trim_end = ((**self->trim_start) + (**self->trim_len)) - 1; in FastqReader_SpotReadInfo()
/dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/libs/sra/
H A Dreader-abi.c68 const INSDC_coord_len** trim_len; member
92 …a(&self->dad, &AbsolidReader_master_columns_desc[4], NULL, (const void***)&self->trim_len)) == 0 && in AbsolidReaderInit()
148 *spot_len = **self->trim_len; in AbsolidReader_SpotInfo()
233 INSDC_coord_zero trim_end = ((**self->trim_start) + (**self->trim_len)) - 1; in AbsolidReader_SpotReadInfo()
H A Dreader-fastq.c77 const INSDC_coord_len** trim_len; member
110 …ta(&self->dad, &FastqReader_master_columns_desc[6], NULL, (const void***)&self->trim_len)) == 0 ) { in FastqReaderInit()
177 *spot_len = **self->trim_len; in FastqReader_SpotInfo()
212 INSDC_coord_zero trim_end = ((**self->trim_start) + (**self->trim_len)) - 1; in FastqReader_SpotReadInfo()
/dports/net/kamailio/kamailio-5.4.5/src/modules/cplc/
H A Dcpl_switches.h356 trim_len( msg_val.len,msg_val.s, in run_string_switch()
378 trim_len( msg_val.len,msg_val.s, in run_string_switch()
400 trim_len( msg_val.len,msg_val.s, in run_string_switch()
558 trim_len( msg_val.len, msg_val.s, *(intr->priority)); in run_priority_switch()
1046 trim_len( msg_val.len,msg_val.s, *(intr->subject)); in run_language_switch()
/dports/biology/sra-tools/sra-tools-2.11.0/ncbi-vdb/test/loader/
H A Dsequencewriter.vschema24 INSDC:coord:len trim_len = _spot_len;

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