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Searched refs:twinMarker (Results 1 – 4 of 4) sorted by relevance

/dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-v0.3.1/src/
H A DpassageMarker.c149 next->twinMarker->nextInSequence = previous->twinMarker; in setPreviousInSequence()
187 marker->twinMarker->nextInNode = next->twinMarker; in setNextInNode()
189 next->twinMarker->previousInNode = marker->twinMarker; in setNextInNode()
217 return marker->twinMarker->nextInSequence->twinMarker; in getPreviousInSequence()
300 marker->twinMarker = twinMarker; in addPassageMarker()
308 twinMarker->twinMarker = marker; in addPassageMarker()
440 marker->twinMarker->start = next->twinMarker->start; in concatenatePassageMarkers()
542 marker->twinMarker = twinMarker; in addUncertainPassageMarker()
553 twinMarker->twinMarker = marker; in addUncertainPassageMarker()
585 marker->twinMarker = twinMarker; in newPassageMarker()
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H A DgraphStats.c1689 PassageMarker *marker, *twinMarker; in cleanUpNode() local
1701 twinMarker = getTwinMarker(marker); in cleanUpNode()
1708 if (getNode(getNextInSequence(twinMarker)) != node in cleanUpNode()
1709 || getPassageMarkerSequenceID(twinMarker) > 0) in cleanUpNode()
1711 getNode(getNextInSequence(twinMarker)), in cleanUpNode()
/dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-1.2.01/Velvet-1.1.06/
H A DpassageMarker.c41 PassageMarkerI twinMarker; member
131 twin = markerVal->twinMarker; in destroyPassageMarker()
165 PM_FI2P (PM_FI2P (next)->twinMarker)->nextInSequence = PM_FI2P (previous)->twinMarker; in setPreviousInSequence()
224 PM_FI2P (markerVal->twinMarker)->nextInNode = nextVal->twinMarker; in setNextInNode()
226 PM_FI2P (nextVal->twinMarker)->previousInNode = markerVal->twinMarker; in setNextInNode()
322 markerVal->twinMarker = twinMarker; in addPassageMarker()
330 twinVal->twinMarker = marker; in addPassageMarker()
442 PM_FI2P (markerVal->twinMarker)->start = PM_FI2P (nextVal->twinMarker)->start; in concatenatePassageMarkers()
567 markerVal->twinMarker = twinMarker; in addUncertainPassageMarker()
603 PassageMarkerI twinMarker; in newPassageMarker() local
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/dports/biology/velvet/velvet_1.2.10/src/
H A DpassageMarker.c41 PassageMarkerI twinMarker; member
129 twin = markerVal->twinMarker; in destroyPassageMarker()
163 PM_FI2P (PM_FI2P (next)->twinMarker)->nextInSequence = PM_FI2P (previous)->twinMarker; in setPreviousInSequence()
222 PM_FI2P (markerVal->twinMarker)->nextInNode = nextVal->twinMarker; in setNextInNode()
224 PM_FI2P (nextVal->twinMarker)->previousInNode = markerVal->twinMarker; in setNextInNode()
320 markerVal->twinMarker = twinMarker; in addPassageMarker()
328 twinVal->twinMarker = marker; in addPassageMarker()
440 PM_FI2P (markerVal->twinMarker)->start = PM_FI2P (nextVal->twinMarker)->start; in concatenatePassageMarkers()
565 markerVal->twinMarker = twinMarker; in addUncertainPassageMarker()
601 PassageMarkerI twinMarker; in newPassageMarker() local
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