Searched refs:typeMain (Results 1 – 4 of 4) sorted by relevance
| /dports/biology/star/STAR-2.7.9a/source/ |
| H A D | SoloFeature_collapseUMIall.cpp | 98 …if ( pSolo.umiDedup.typeMain != UMIdedup::typeI::NoDedup ) //for NoDedup, the UMI filtering is not… in collapseUMIall()
142 …umiArrayCorrect_CR(nU0, umiArray, readInfo.size()>0 && pSolo.umiDedup.typeMain==UMIdedup::typeI::C… in collapseUMIall()
146 …yCorrect_Directional(nU0, umiArray, readInfo.size()>0 && pSolo.umiDedup.typeMain==UMIdedup::typeI:… in collapseUMIall()
150 …yCorrect_Directional(nU0, umiArray, readInfo.size()>0 && pSolo.umiDedup.typeMain==UMIdedup::typeI:… in collapseUMIall()
155 …miArrayCorrect_Graph(nU0, umiArray, readInfo.size()>0 && pSolo.umiDedup.typeMain==UMIdedup::typeI:… in collapseUMIall()
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| H A D | ParametersSolo.h | 34 int32 typeMain; //the type to be used in SAM/stats/filtering output - for now just types[0] variable
64 int32 typeMain; //the type to be used in SAM/stats/filtering output - for now just types[0] variable
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| H A D | SoloFeature_collapseUMIall_multiMappers.cpp | 102 …if ( pSolo.umiDedup.typeMain != UMIdedup::typeI::NoDedup ) //for NoDedup, the UMI filtering is not… in collapseUMIall()
146 …umiArrayCorrect_CR(nU0, umiArray, readInfo.size()>0 && pSolo.umiDedup.typeMain==UMIdedup::typeI::C… in collapseUMIall()
150 …yCorrect_Directional(nU0, umiArray, readInfo.size()>0 && pSolo.umiDedup.typeMain==UMIdedup::typeI:… in collapseUMIall()
154 …yCorrect_Directional(nU0, umiArray, readInfo.size()>0 && pSolo.umiDedup.typeMain==UMIdedup::typeI:… in collapseUMIall()
159 …miArrayCorrect_Graph(nU0, umiArray, readInfo.size()>0 && pSolo.umiDedup.typeMain==UMIdedup::typeI:… in collapseUMIall()
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| H A D | ParametersSolo.cpp | 600 typeMain = types[0]; //main is the 0th entry in typesIn in initialize()
648 typeMain = types[0]; //main is the 0th entry in typesIn in initialize()
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