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Searched refs:uSeqIndexIn (Results 1 – 4 of 4) sorted by relevance

/dports/biology/muscle/muscle-3.8.1551/
H A Dmsa2.cpp283 unsigned uSeqIndexIn = uSeqIndexes[uSeqIndexOut]; in MSAFromSeqSubset() local
284 const char *ptrName = msaIn.GetSeqName(uSeqIndexIn); in MSAFromSeqSubset()
285 unsigned uId = msaIn.GetSeqId(uSeqIndexIn); in MSAFromSeqSubset()
290 const char c = msaIn.GetChar(uSeqIndexIn, uColIndex); in MSAFromSeqSubset()
H A Dmsa.cpp724 const unsigned uSeqIndexIn = msaIn.GetSeqIndex(uId); in MSASubsetByIds() local
725 const char *ptrName = msaIn.GetSeqName(uSeqIndexIn); in MSASubsetByIds()
732 const char c = msaIn.GetChar(uSeqIndexIn, uColIndex); in MSASubsetByIds()
/dports/biology/ugene/ugene-40.1/src/plugins_3rdparty/umuscle/src/muscle/
H A Dmsa2.cpp295 unsigned uSeqIndexIn = uSeqIndexes[uSeqIndexOut]; in MSAFromSeqSubset() local
296 const char *ptrName = msaIn.GetSeqName(uSeqIndexIn); in MSAFromSeqSubset()
297 unsigned uId = msaIn.GetSeqId(uSeqIndexIn); in MSAFromSeqSubset()
302 const char c = msaIn.GetChar(uSeqIndexIn, uColIndex); in MSAFromSeqSubset()
H A Dmsa.cpp771 const unsigned uSeqIndexIn = msaIn.GetSeqIndex(uId); in MSASubsetByIds() local
772 const char *ptrName = msaIn.GetSeqName(uSeqIndexIn); in MSASubsetByIds()
779 const char c = msaIn.GetChar(uSeqIndexIn, uColIndex); in MSASubsetByIds()