/dports/biology/plink/plink-ng-79b2df8c/1.9/ |
H A D | plink_homozyg.c | 1601 wptr = uint32toa(pool_ct, g_logbuf); in roh_pool() 1886 wptr = uint32toa((uint32_t)(cur_pool[-1] >> 32), &(outname_end[14])); in roh_pool() 1888 wptr = uint32toa((uint32_t)cur_pool[-1], &(outname_end[14])); in roh_pool() 1918 wptr = uint32toa(slot_idx1 + 1, g_textbuf); in roh_pool() 1938 wptr = uint32toa(slot_idx1 + 1, g_textbuf); in roh_pool() 2017 wptr = uint32toa(ujj, wptr); in roh_pool() 2315 wptr = width_force(5, wptr, uint32toa(ulii & 0x7fffffff, wptr)); in roh_pool() 2358 wptr = width_force(plink_maxiid, wptr, uint32toa(pool_size, wptr)); in roh_pool() 2360 cptr = uint32toa(case_ct, wptr); in roh_pool() 2362 cptr = uint32toa(pool_size - case_ct, cptr); in roh_pool() [all …]
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H A D | plink_rserve.c | 235 bufptr = uint32toa(pheno_nm_ct, bufptr); in rserve_call() 411 bufptr = uint32toa(block_size, bufptr); in rserve_call()
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H A D | plink_data.c | 10359 wptr2 = uint32toa(uii, wptr); in generate_dummy() 10377 wptr2 = uint32toa(uii, wptr); in generate_dummy() 10410 wptr2 = uint32toa(uii, wptr); in generate_dummy() 10412 wptr2 = uint32toa(uii, wptr2); in generate_dummy() 10424 wptr2 = uint32toa(uii, wptr); in generate_dummy() 10426 wptr2 = uint32toa(uii, wptr2); in generate_dummy() 11151 wptr = uint32toa(cur_marker_idx, wptr); in simulate_dataset() 11321 wptr = uint32toa(cur_marker_idx, wptr); in simulate_dataset() 11348 wptr = uint32toa(cur_marker_idx, wptr); in simulate_dataset() 11407 wptr = uint32toa(sample_idx, wptr); in simulate_dataset() [all …]
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H A D | plink_common.c | 941 char* uint32toa(uint32_t uii, char* start) { in uint32toa() function 1007 return uint32toa(uii, start); in int32toa() 1040 return uint32toa((uint32_t)ullii, start); in int64toa() 1045 start = uint32toa((uint32_t)top_digits, start); in int64toa() 1050 start = uint32toa((uint32_t)ullii, start); in int64toa() 1075 return uint32toa(uii, start); in uint32toa_w4() 2250 start = uint32toa(quotient, start); in dtoa_f_p2() 2302 start = uint32toa(quotient, start); in dtoa_f_p3() 2336 start = uint32toa(quotient, start); in dtoa_f_w9p6() 2384 start = uint32toa(quotient, start); in dtoa_f_w7p4() [all …]
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H A D | plink_cnv.c | 465 wptr2 = uint32toa(bp_pos, wptr2); in cnv_make_map_write()
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H A D | plink_assoc.c | 6899 wptr2 = uint32toa(umm, wptr2); in model_assoc() 6904 wptr2 = uint32toa(uii, wptr2); in model_assoc() 6944 wptr2 = uint32toa(umm * 2 + unn, wptr2); in model_assoc() 6948 wptr2 = uint32toa(uii * 2 + ujj, wptr2); in model_assoc() 6996 wptr2 = uint32toa(umm, wptr2); in model_assoc() 7000 wptr2 = uint32toa(uii, wptr2); in model_assoc() 7037 wptr2 = uint32toa(unn + umm, wptr2); in model_assoc() 7041 wptr2 = uint32toa(ujj + uii, wptr2); in model_assoc() 7555 wptr = uint32toa(uii + ujj, wptr); in model_assoc() 8902 wptr = uint32toa(uii + ujj, wptr); in qassoc() [all …]
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H A D | plink_cluster.c | 1762 bufptr = uint32toa((uint32_t)missing_pheno, bufptr); in cluster_enforce_match() 3118 wptr = uint32toa(dim_idx + 1, g_textbuf); in mds_plot() 3427 wptr = uint32toa(dim_idx + 1, g_textbuf); in mds_plot_eigendecomp()
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H A D | plink_common.h | 1548 char* uint32toa(uint32_t uii, char* start); 1642 char* penult = uint32toa(uii, start); in uint32toa_x()
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H A D | plink_glm.c | 5092 wptr = uint32toa(cur_constraint_ct, &(param_names[param_ct_max * max_param_name_len + 5])); in glm_linear_assoc() 5422 wptr = uint32toa(uii + ujj, wptr); in glm_linear_assoc() 6563 wptr = uint32toa(cur_constraint_ct, &(param_names[param_ct_max * max_param_name_len + 5])); in glm_logistic_assoc() 6858 wptr = uint32toa(uii + ujj, wptr); in glm_logistic_assoc() 7385 wptr = uint32toa(constraint_ct, wptr); in glm_linear_nosnp() 8257 wptr = uint32toa(constraint_ct, wptr); in glm_logistic_nosnp()
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H A D | plink_misc.c | 530 bufptr = uint32toa(uii, fname_write); in apply_cm_map() 2940 pzwritep = uint32toa(missing_ct, pzwritep); in write_freqs() 5954 wptr = uint32toa(file_idx, &(g_textbuf[2])); in meta_analysis() 6304 wptr = width_force(3, wptr, uint32toa(cur_file_ct, wptr)); in meta_analysis()
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H A D | plink_filter.c | 2849 cptr = uint32toa(ll_ct, cptr); in hardy_report_write_line() 2853 cptr = uint32toa(hh_ct, cptr); in hardy_report_write_line()
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H A D | plink_set.c | 3658 bufptr = uint32toa(cur_bp, g_textbuf); in gene_report() 3661 bufptr = uint32toa(uii - 1, bufptr); in gene_report()
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H A D | plink_ld.c | 6273 bufptr = uint32toa(parallel_idx + 1, bufptr); in ld_report() 13744 bufptr2 = uint32toa(clump_chrom_idx, bufptr2); in clump_reports() 13751 bufptr2 = uint32toa(min_bp, bufptr2); in clump_reports() 13753 bufptr2 = uint32toa(max_bp, bufptr2); in clump_reports() 13910 bufptr = uint32toa(clump_chrom_idx, bufptr); in clump_reports() 13917 bufptr = uint32toa(min_bp, bufptr); in clump_reports() 13919 bufptr = uint32toa(max_bp, bufptr); in clump_reports() 13921 bufptr = uint32toa((max_bp - min_bp + 1) / 1000, bufptr); in clump_reports()
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H A D | plink_dosage.c | 2284 pzwritep = uint32toa(*((uint32_t*)(&(bufptr2[slen + 1]))), pzwritep); in plink1_dosage()
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H A D | plink_calc.c | 7193 wptr = uint32toa(pc_idx, wptr); in calc_pca() 7393 wptr = uint32toa(pc_idx, wptr); in calc_pca()
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H A D | plink_family.c | 2399 wptr2 = uint32toa(ujj - uii, wptr2); in tdt()
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H A D | plink.c | 2012 outname_end2 = uint32toa(uii, &(outname_end[2])); in plink()
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