Searched refs:use_softclipped_bases (Results 1 – 1 of 1) sorted by relevance
1835 …4 * all_mapped_reads, int do_fragment_filtering, int push_to_read_head, int use_softclipped_bases ) in break_SAM_file() argument2011 if(cc == 'M' || use_softclipped_bases) in break_SAM_file()