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Searched refs:w_al_s1 (Results 1 – 6 of 6) sorted by relevance

/dports/biology/vt/vt-0.57721/
H A Dvntr_genotyping_record.cpp340 float w_al_s1 = log(tmp_al_s1+1.); //sqrt(al_s1); in flush_sample() local
367 nm1_num += (nm1 * w_al_s1); nm1_den += w_al_s1; in flush_sample()
H A Dsnp_genotyping_record.cpp343 float w_al_s1 = log(tmp_al_s1+1.); //sqrt(al_s1); in flush_sample() local
370 nm1_num += (nm1 * w_al_s1); nm1_den += w_al_s1; in flush_sample()
H A Dindel_genotyping_record.cpp356 float w_al_s1 = log(tmp_al_s1+1.); //sqrt(al_s1); in flush_sample() local
383 nm1_num += (nm1 * w_al_s1); nm1_den += w_al_s1; in flush_sample()
H A Dcomplex_genotyping_record.cpp392 float w_al_s1 = log(tmp_al_s1+1.); //sqrt(al_s1); in flush_sample() local
419 nm1_num += (nm1 * w_al_s1); nm1_den += w_al_s1; in flush_sample()
H A Dpaste_and_compute_features_sequential.cpp541 float w_al_s1 = log(al_s1+1.); //sqrt(al_s1); in paste_and_compute_features_sequential() local
567 v_nm1_nums[k] += (nm1 * w_al_s1); v_nm1_dens[k] += w_al_s1; in paste_and_compute_features_sequential()
H A Dpaste_genotypes.cpp561 float w_al_s1 = log(al_s1+1.); //sqrt(al_s1); in paste_genotypes() local
587 v_nm1_nums[k] += (nm1 * w_al_s1); v_nm1_dens[k] += w_al_s1; in paste_genotypes()