Searched refs:warpj (Results 1 – 5 of 5) sorted by relevance
/dports/biology/mafft/mafft-7.267-without-extensions/core/ |
H A D | Galign11.c | 209 int *warpj = NULL; in G__align11() local 272 warpj = AllocateIntVec( lgth2+1 ); in G__align11() 281 for( i=0; i<lgth2+1; i++ ) warpj[i] = -warpbase; in G__align11() 510 warpjpt = warpj + 1; in G__align11() 646 intncpy( prevwarpj, warpj, lastj ); in G__align11() 657 free( warpj ); in G__align11()
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H A D | Lalign11.c | 254 int *warpj = NULL; in L__align11() local 311 warpj = AllocateIntVec( lgth2+1 ); in L__align11() 320 for( i=0; i<lgth2+1; i++ ) warpj[i] = -warpbase; in L__align11() 528 warpjpt = warpj + 1; in L__align11() 686 intncpy( prevwarpj, warpj, lastj ); in L__align11() 697 free( warpj ); in L__align11()
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H A D | partSalignmm.c | 1014 int *warpj = NULL; in partA__align() local 1125 warpj = AllocateIntVec( lgth2+1 ); in partA__align() 1134 for( i=0; i<lgth2+1; i++ ) warpj[i] = -warpbase; in partA__align() 1463 warpjpt = warpj + 1; in partA__align() 1578 intncpy( prevwarpj, warpj, lastj ); in partA__align() 1588 free( warpj ); in partA__align() 1702 int *warpj = NULL; in partA__align_variousdist() local 1837 warpj = AllocateIntVec( lgth2+1 ); in partA__align_variousdist() 2197 warpjpt = warpj + 1; in partA__align_variousdist() 2315 intncpy( prevwarpj, warpj, lastj ); in partA__align_variousdist() [all …]
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H A D | Salignmm.c | 1073 int *warpj = NULL; in A__align() local 1187 warpj = AllocateIntVec( lgth2+1 ); in A__align() 1196 for( i=0; i<lgth2+1; i++ ) warpj[i] = -warpbase; in A__align() 1581 warpjpt = warpj + 1; in A__align() 1703 intncpy( prevwarpj, warpj, lastj ); in A__align() 1714 free( warpj ); in A__align() 1840 int *warpj = NULL; in A__align_variousdist() local 1980 warpj = AllocateIntVec( lgth2+1 ); in A__align_variousdist() 2431 warpjpt = warpj + 1; in A__align_variousdist() 2552 intncpy( prevwarpj, warpj, lastj ); in A__align_variousdist() [all …]
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H A D | Dalignmm.c | 2775 int *warpj = NULL; in D__align() local 2913 warpj = AllocateIntVec( lgth2+1 ); in D__align() 2922 for( i=0; i<lgth2+1; i++ ) warpj[i] = -warpbase; in D__align() 3658 warpjpt = warpj + 1; in D__align() 4307 intncpy( prevwarpj, warpj, lastj ); in D__align() 4322 free( warpj ); in D__align() 4611 int *warpj = NULL; in D__align_variousdist() local 4783 warpj = AllocateIntVec( lgth2+1 ); in D__align_variousdist() 5588 warpjpt = warpj + 1; in D__align_variousdist() 6240 intncpy( prevwarpj, warpj, lastj ); in D__align_variousdist() [all …]
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