Home
last modified time | relevance | path

Searched +refs:which +refs:species (Results 1 – 25 of 3074) sorted by relevance

12345678910>>...123

/dports/science/cantera/cantera-2.5.1-611-gc4d6ecc15/interfaces/matlab/toolbox/@Kinetics/
H A Dstoich_net.m1 function nu = stoich_net(a, species, rxns)
3 % nu = stoich_net(a,species,rxns)
10 % for which the net stoichiometric coefficients are desired.
11 % :param species:
12 % Species indices for which net stoichiometric coefficients
16 % Reaction indices for which net stoichiometric coefficients
17 % should be retrieved. Optional argument; if specified, ``species``
22 % stoichiometric coefficient of species k as a net in
24 % will contain only entries for the specified species and
26 % sparse matrix containing only the coefficients for species 3
[all …]
H A Dstoich_p.m1 function nu_p = stoich_p(a, species, rxns)
3 % nu_p = stoich_p(a,species,rxns)
10 % for which the product stoichiometric coefficients are desired.
11 % :param species:
12 % Species indices for which product stoichiometric coefficients
16 % Reaction indices for which product stoichiometric coefficients
17 % should be retrieved. Optional argument; if specified, ``species``
22 % stoichiometric coefficient of species k as a product in
24 % will contain only entries for the specified species and
26 % sparse matrix containing only the coefficients for species 3
[all …]
H A Dstoich_r.m1 function nu_r = stoich_r(a, species, rxns)
3 % nu_r = stoich_r(a,species,rxns)
10 % for which the reactant stoichiometric coefficients are desired.
11 % :param species:
12 % Species indices for which reactant stoichiometric coefficients
16 % Reaction indices for which reactant stoichiometric coefficients
17 % should be retrieved. Optional argument; if specified, ``species``
22 % stoichiometric coefficient of species k as a reactant in
24 % will contain only entries for the specified species and
26 % sparse matrix containing only the coefficients for species 3
[all …]
H A DnTotalSpecies.m2 % NTOTALSPECIES Get the total number of species.
4 % The total number of species, summed over all
10 % for which the number of species is desired.
12 % Integer total number of species
/dports/math/R-cran-VGAM/VGAM/R/
H A Dcao.fit.q881 which = which, p1 = p1) # For 1 species
1173 which.species <- 1:NOS # Do it for all species
1192 match(which.species[sppno], ynames) else which.species[sppno]
1407 which.species <- 1:NOS
1454 match(which.species[sppno], sppnames) else which.species[sppno]
1597 match(which.species[sppno], sppnames) else which.species[sppno]
1751 if (!length(which.species)) which.species <- 1:NOS
1766 match(which.species[sppno], sppnames) else which.species[sppno]
1871 which.species.numer <- which.species
1872 which.species <- sppNames[which.species.numer] # Convert to character
[all …]
/dports/science/cantera/cantera-2.5.1-611-gc4d6ecc15/doc/sphinx/yaml/
H A Dspecies.rst59 The reference pressure at which the given thermodynamic properties apply.
73 A list giving the temperature intervals on which the polynomials are valid.
106 A list giving the temperature intervals on which the polynomials are valid.
142 A list giving the temperature intervals on which the polynomials are valid.
185 The minimum temperature at which this thermo data should be used.
189 The maximum temperature at which this thermo data should be used.
226 The minimum temperature at which this thermo data should be used.
230 The maximum temperature at which this thermo data should be used.
292 A model in which the density varies with temperature as
394 A model in which the molar volume varies with temperature as
[all …]
H A Dphases.rst17 - Omitted, in which case the standard elements will be added as needed by
19 - A list of element symbols, which can be either defined in the ``elements``
28 ``species``
98 - The string ``all``, which indicates that all reactions from the
101 - The string ``declared-species``, which indicates that all reactions from
104 - The string ``none``, which indicates that no reactions should be added.
107 - A list of sections from which to include reactions. These sections can be
201 The name of the species to which the tabulated enthalpy and entropy is
318 which may be defined in the ``Debye-Huckel`` field of the *species* entry. These
677 ``species``
[all …]
/dports/lang/lfe/lfe-1.3/examples/
H A Dobject-via-process.lfe22 ;; * have methods which can call other methods
40 ;; > (send mommy-fish 'species)
67 ;; #(species "Carp")
74 (defun init-fish (species)
76 one pass a 'species' string.
79 (init-fish species ()))
93 "This function is intended to be spawned as a separate process which is
95 this function (which acts as a loop, pattern matching for messages)."
103 (`#(,caller species ())
104 (! caller species)
[all …]
/dports/math/R-cran-VGAM/VGAM/man/
H A Dtrplot.qrrvglm.Rd14 trplot.qrrvglm(object, which.species = NULL, add = FALSE, show.plot = TRUE,
27 \item{which.species}{ Integer or character vector specifying the
30 species' names.
31 The default is to use all species.
54 Here, \code{nos} is the number of species.
58 \item{log}{ Character, specifying which (if any) of the x- and
121 against a `first' species. The argument \code{which.species} must
124 With more than a few species
141 \item{species.names}{
192 trplot(p1, which.species = 1:3, log = "xy", type = "b", lty = 1,
[all …]
H A Dpersp.qrrvglm.Rd14 which.species = NULL,
57 \item{which.species}{
58 Numeric or character vector. Indicates which species are to be
61 is the number of species.
116 arguments here include \code{theta} and \code{phi}, which control
133 species will be obscured and abundant species will dominate the plot.
134 To view rare species, use the \code{which.species} argument to select
135 a subset of the species.
160 of the fitted values over all species.
227 # Involves all species
[all …]
H A Dcorbet.Rd12 They were classified to about 500 species.
20 \item{\code{species}}{Number of species. }
22 butterflies of that species. }
31 in Malaya. Of interest was the total number of species.
32 Some species were so rare (e.g., 118 species had only
34 many unknown species.
42 %% ~~ reference to a publication or URL from which the data were obtained ~~
H A Dtrplot.Rd13 \item{object}{ An object for which a trajectory plot is meaningful.
30 fitted values of two species against each other (more than
78 trplot(p1cqo, which.species = 1:3, log = "xy",
80 legend(0.00005, 0.3, paste(ii$species[, 1], ii$species[, 2], sep = " and "),
/dports/science/sparta/sparta-20Oct2021/data/
H A DREADME6 Files that end in ".species" contain thermophysical properties of
7 chemical species and are read by the species command.
9 Files that end in ".species.vib" contain additional info about the
10 vibrational modes of polyatomic chemcial species. They are read by
11 the species command via its "vibfile" option.
24 Files that end in ".stl" are STL-formatted surface files which can be
31 These are the doc pages for various commands which describe the format
34 species = doc/species.html
35 species.vib = doc/species.html
/dports/science/cantera/cantera-2.5.1-611-gc4d6ecc15/doc/doxygen/
H A Dthermoprops.dox55 * reference states, which manage the calculation for all of the species
94 * calculations. However, there are some PDSS objects which do not employ
103 * Lists of phases which belong to this group are given below
120 * Lists of phases which belong to this group are:
127 * Stoichiometric phases are phases which consist of one and only one
168 * For classes which inherit from VPStandardStateTP, the above order may
333 * may increase or decrease their electrochemical potentials, which will
359 * which depends on the temperature and pressure,
420 * which most often equate to solid phase mole fractions. In order to
497 * ready to start reading in the species information, which includes
[all …]
/dports/science/py-pymatgen/pymatgen-2022.0.15/pymatgen/command_line/
H A Denumlib_caller.py43 from monty.os.path import which
56 enum_cmd = which("enum.x") or which("multienum.x")
58 makestr_cmd = which("makestr.x") or which("makeStr.x") or which("makeStr.py")
192 species = dict(sites[0].species.items())
193 if sum(species.values()) < 1 - EnumlibAdaptor.amount_tol:
196 species[DummySpecies("X")] = 1 - sum(species.values())
197 for sp, amt in species.items():
368 [site.species for site in self.ordered_sites],
402 site.species,
/dports/science/kim-api/kim-api-2.2.1/examples/model-drivers/LennardJones612__MD_414112407348_003/
H A DREADME32 Driver which reads a parameter file containing the parameters for up to 139
33 species. It supports shifted and non-shifted energy behavior. The driver is
42 where i, j = 0, 1, 2, ..., N-1, and N is the number of supported species.
50 - N : integer number of distinct particle species
54 - species_i : A valid KIM API particle species string
55 - species_j : A valid KIM API particle species string
62 where species_i and species_j are identical) for each species which occurs in
64 "cross-interaction" parameter sets which are not provided. The model driver
/dports/science/openkim-models/openkim-models-2021-01-28/model-drivers/LJ__MD_414112407348_003/
H A DREADME31 This directory contains a Lennard-Jones Driver which reads a parameter file
32 containing the parameters for up to 139 species. It supports shifted and
41 where i, j = 0, 1, 2, ..., N-1, and N is the number of supported species.
49 - N : integer number of distinct particle species
53 - species_i : A valid KIM API particle species string
54 - species_j : A valid KIM API particle species string
61 where species_i and species_j are identical) for each species which occurs in
63 "cross-interaction" parameter sets which are not provided. The model driver
/dports/science/elk/elk-7.2.42/species/
H A Delk.in2 ! This is a special input file for Elk which generates the default species
9 species
17 species
25 species
34 species
43 species
53 species
64 species
75 species
86 species
[all …]
/dports/games/stonesoup/crawl-0.27.1/crawl-ref/source/util/
H A Dgen-all.cmd20 perl util/gen-apt.pl ../docs/aptitudes.txt ../docs/template/apt-tmpl.txt species-data.h aptitudes.h
22 perl util/gen-apt.pl ../docs/aptitudes-wide.txt ../docs/template/apt-tmpl-wide.txt species-data.h a…
24 :: docs/species-type.h
26 python util/species-gen.py dat/species/ util/species-gen/ species-data.h aptitudes.h species-groups…
29 ::which cuts the size in half
/dports/science/cantera/cantera-2.5.1-611-gc4d6ecc15/interfaces/matlab/toolbox/1D/@Domain1D/
H A DmassFraction.m2 % MASSFRACTION Get the mass fraction of a species given its integer index.
4 % This method returns the mass fraction of species ``k``, where
5 % k is the integer index of the species in the flow domain
6 % to which the boundary domain is attached.
11 % Integer species index
13 % Mass fraction of species
/dports/games/dungeoncrawl/dc400b26-src/source/
H A Dabl-show.cc72 int which; member
422 if (Curr_abil[spc2].which == -1) in activate_ability()
432 switch (Curr_abil[abil_used].which) in activate_ability()
576 switch (Curr_abil[abil_used].which) in activate_ability()
631 if (Curr_abil[abil_used].which != ABIL_SPIT_ACID) in activate_ability()
1377 Curr_abil[loopy].which = ABIL_NON_ABILITY; in generate_abilities()
1399 if (you.species == SP_NAGA) in generate_abilities()
1675 if (Curr_abil[loopy].which != ABIL_NON_ABILITY) in generate_abilities()
1873 Curr_abil[slot].which = which_ability; in insert_ability()
2019 if (you.species == SP_TROLL) in insert_ability()
[all …]
/dports/science/py-ruffus/ruffus-2.8.3/doc/tutorials/new_tutorial/
H A Ddeprecated_files_re.rst19 **which is no longer supported and**
80 from the same species in the same directory:
86 r'\1/animals.in_my_zoo', # single output file per species
87 r'\1' ) # species name
88 def capture_mammals(infiles, outfile, species):
89 # summarise all animals of this species
98 combine(r'\1/animals.in_my_zoo'), # single output file per species
99 r'\1' ) # species name
100 def capture_mammals(infiles, outfile, species):
101 # summarise all animals of this species
[all …]
/dports/science/sparta/sparta-20Oct2021/src/
H A Dfix_emit_face_file.cpp192 int ispecies = particle->mixture[imix]->species[m]; in init()
357 int *species = particle->mixture[imix]->species; in perform_task() local
397 ispecies = species[isp]; in perform_task()
455 ispecies = species[isp]; in perform_task()
739 if (mesh.which[m] == VX || mesh.which[m] == VY || mesh.which[m] == VZ) in check_mesh_values()
1053 Particle::Species *species = particle->species; in subsonic_inflow() local
1055 int *mspecies = particle->mixture[imix]->species; in subsonic_inflow()
1070 mass = species[mspecies[isp]].mass; in subsonic_inflow()
1159 Particle::Species *species = particle->species; in subsonic_grid() local
1179 mass = species[ispecies].mass; in subsonic_grid()
[all …]
/dports/science/apbs/apbs-pdb2pqr-apbs-1.5-102-g500c1473/doc/apbs/input/elec/
H A Dion.rst6 Specify the bulk concentrations of mobile ion species present in the system.
8 The total bulk system of ions must be electroneutral which means the charge densities/concentration…
18 Mobile ion species charge (floating point number in ec)
20 Mobile ion species concentration (floating point number in M)
22 Mobile ion species radius (floating point number in Å)
/dports/science/cantera/cantera-2.5.1-611-gc4d6ecc15/data/inputs/
H A Dwater.cti4 # liquidvapor.cti, which uses an accurate liquid/vapor equation of
10 species = "H2O(S)",
18 species = "H2O(L)",
24 species(name = "H2O(S)",
33 species(name = "H2O(L)",

12345678910>>...123