/dports/archivers/liblz4/lz4-1.9.3/tests/ |
H A D | test_custom_block_sizes.sh | 10 TMPFILE=/tmp/test_custom_block_sizes.$$ 24 cat $TMPFILE1.lz4 $TMPFILE2.lz4 > $TMPFILE.lz4 25 $CHECKFRAME -B$blocksize -b4 $TMPFILE.lz4 || failures="$failures $blocksize " 33 cat $TMPFILE1.lz4 $TMPFILE2.lz4 > $TMPFILE.lz4 34 $CHECKFRAME -B$blocksize -b5 $TMPFILE.lz4 || failures="$failures $blocksize " 42 cat $TMPFILE1.lz4 $TMPFILE2.lz4 > $TMPFILE.lz4 43 $CHECKFRAME -B$blocksize -b6 $TMPFILE.lz4 || failures="$failures $blocksize " 51 cat $TMPFILE1.lz4 $TMPFILE2.lz4 > $TMPFILE.lz4 60 cat $TMPFILE1.lz4 $TMPFILE2.lz4 > $TMPFILE.lz4 61 $CHECKFRAME -B4194304 -b7 $TMPFILE.lz4 || failures="$failures $blocksize " [all …]
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/dports/archivers/lzo2/lzo-2.10/util/ |
H A D | check.sh | 28 TMPFILE="/tmp/lzotest_$$.tmp" 29 rm -f "$TMPFILE" 30 (find "$dir/." -type f -print | LC_ALL=C sort > "$TMPFILE") || true 45 cat "$TMPFILE" | "$LZOTEST" "-m$m" -@ $LFLAGS 48 rm -f "$TMPFILE"
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H A D | checkasm.sh | 28 TMPFILE="/tmp/lzotest_$$.tmp" 29 rm -f "$TMPFILE" 35 cat "$TMPFILE" | "$LZOTEST" -m${m} -@ $LFLAGS -A 36 cat "$TMPFILE" | "$LZOTEST" -m${m} -@ $LFLAGS -A -S 40 cat "$TMPFILE" | "$LZOTEST" -m${m} -@ $LFLAGS -F 41 cat "$TMPFILE" | "$LZOTEST" -m${m} -@ $LFLAGS -F -S 45 cat "$TMPFILE" | "$LZOTEST" -m${m} -@ $LFLAGS -A 46 cat "$TMPFILE" | "$LZOTEST" -m${m} -@ $LFLAGS -A -S 47 cat "$TMPFILE" | "$LZOTEST" -m${m} -@ $LFLAGS -F 48 cat "$TMPFILE" | "$LZOTEST" -m${m} -@ $LFLAGS -F -S [all …]
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H A D | overlap.sh | 25 TMPFILE="/tmp/lzo_$$.tmp" 26 rm -f "$TMPFILE" 27 (find "$dir/." -type f -print0 | LC_ALL=C sort -z > "$TMPFILE") || true 29 cat "$TMPFILE" | xargs -0 -r "$OVERLAP" 31 rm -f "$TMPFILE"
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/dports/archivers/p5-Compress-Bzip2/Compress-Bzip2-2.24/t/ |
H A D | 041-error.t | 30 my $TMPFILE = "$PREFIX-protected.bz2"; 31 unlink( $TMPFILE ) if -f $TMPFILE; 35 sysopen( $out, $TMPFILE, O_WRONLY|O_CREAT ) or die "failed $TMPFILE $!"; 55 File::Copy::syscopy($MODELFILE, $TMPFILE); 56 chmod( 0644, $TMPFILE ) or die; 58 ok ( compare_binary_files( $MODELFILE, $TMPFILE ), "no differences with $MODELFILE reference" ); 60 chmod( 0000, $TMPFILE ) or die; 63 skip "0000 but writable ($>/$^O)", 2 if -w $TMPFILE; 66 $res = $d->bzopen( $TMPFILE, "w" );
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/dports/archivers/zip/zip30/amiga/ |
H A D | LMKfile | 26 TMPFILE = ram:MakeZip.tmp 68 -echo "$(OBJZ)" > $(TMPFILE) 69 $(LD) TO Zip FROM $(LDSTART) WITH $(TMPFILE) $(LDFLAGS) $(LDBG) 70 -delete $(TMPFILE) Zip.info 73 -echo "$(OBJN)" > $(TMPFILE) 74 $(LD) TO ZipNote FROM $(LDSTART) WITH $(TMPFILE) $(LDFLAGS) $(LDBG) 75 -delete $(TMPFILE) ZipNote.info 78 -echo "$(OBJC)" > $(TMPFILE) 80 -delete $(TMPFILE) ZipCloak.info 83 -echo "$(OBJS)" > $(TMPFILE) [all …]
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/dports/astro/astrometry/astrometry.net-0.85/util/ |
H A D | makefile.common | 96 TMPFILE := cc-out.tmp 104 CCTEST = $(CC) -x c -c -o $(TMPFILE) $(ARG) - 2>&1 > /dev/null < /dev/null | grep "unrecognized\|in… 106 LINKTEST = $(CC) -x c -o $(TMPFILE) $(ARG) - 2>&1 > /dev/null < /dev/null | grep "unrecognized\|inv… 248 X := $(shell rm -f $(TMPFILE))
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/dports/astro/gpsd/gpsd-3.20/ |
H A D | SConstruct | 2305 ' $SRCDIR/gpsdecode -u -j <$${f} >$${TMPFILE}; ' 2307 ' rm -f $${TMPFILE}; ' 2314 ' rm -f $${TMPFILE}; ', 2337 ' rm -f $${TMPFILE}; ' 2345 ' rm -f $${TMPFILE}; ' 2351 ' $SRCDIR/gpsdecode -j <$${f} >$${TMPFILE}; ' 2353 ' rm -f $${TMPFILE}; ' 2358 ' >$${TMPFILE}; ' 2361 ' rm -f $${TMPFILE}; ', 2367 ' >$${TMPFILE};' [all …]
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/dports/audio/ardour6/Ardour-6.8.0/tools/doxy2json/ |
H A D | ardourdoc.sh | 9 TMPFILE=`mktemp` 12 echo "# analyzing source.. -> $TMPFILE" 35 > $TMPFILE 37 ls -lh $TMPFILE 40 ./tools/doxy2json/postproc.sh $TMPFILE 42 cp -vi $TMPFILE doc/ardourapi-pre.json
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/dports/audio/vst3sdk/vst3sdk-3.7.1_build_50-1-g8199057/cmake/modules/ |
H A D | SMTG_Platform_Windows.cmake | 17 set(TMPFILE ${TMPDIR}\\smtg_mkdir_windows_as_admin.bat) variable 18 file(WRITE ${TMPFILE} "mkdir \"${directory_name}\"") 27 powershell.exe Start-Process ${TMPFILE} -Verb runAs
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/dports/audio/xmcd/xmcd-3.3.2/ |
H A D | install.sh | 58 TMPFILE=/tmp/xmcdinst.$$ 381 $LDD xmcd_d/xmcd >$TMPFILE 2>/dev/null 383 if fgrep '=>' $TMPFILE >/dev/null 2>&1 386 DYNLIBS="`fgrep -v 'not found' $TMPFILE | \ 389 ERRLIBS="`fgrep 'not found' $TMPFILE | $AWK '{ print $1 }' | \ 393 DYNLIBS="`fgrep 'loaded:' $TMPFILE | sed 's/^.*: //' | \ 395 ERRLIBS="`fgrep 'error opening' $TMPFILE | \ 400 rm -f $TMPFILE 522 trap "rm -f $TMPFILE; exit 1" 1 2 3 5 15
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/dports/audio/xmcd/xmcd-3.3.2/misc_d/ |
H A D | genidx.sh | 40 TMPFILE=/tmp/_gilist.$$ 216 done | sort -f +1 | awk '{ print $1 }' >$TMPFILE 2>&1 220 for j in `cat $TMPFILE` 248 rm -f $TMPFILE
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/dports/biology/biosig/biosig-2.3.3/biosig4c++/R/ |
H A D | loadgdf.r | 129 TMPFILE <- tempfile("gdf", fileext='.gdf') functionVar 136 status<-system2(converter, args=paste(filename, TMPFILE, sep=" ")) 142 fid <- file(TMPFILE, "rb") 260 file.remove(TMPFILE)
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/dports/biology/emboss/EMBOSS-6.6.0/scripts/ |
H A D | bundlewin.c | 87 #define TMPFILE "/tmp/hfuncts_1" macro 94 #define TMPFILE "hfuncts_1.txt" macro 315 write_coreexports(TMPFILE,newbasedir); in main() 348 fp=fopen(TMPFILE,"w"); in main() 352 fprintf(stderr,"Cannot open temporary file %s\n",TMPFILE); in main() 364 write_nucleusexports(TMPFILE,newbasedir); in main() 3097 fp = fopen(TMPFILE,"w"); in make_ajax_header_exports() 3101 fprintf(stderr,"Cannot open temporary file %s\n",TMPFILE); in make_ajax_header_exports() 3130 fp = fopen(TMPFILE,"w"); in make_expat_header_exports() 3134 fprintf(stderr,"Cannot open temporary file %s\n",TMPFILE); in make_expat_header_exports() [all …]
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/dports/biology/hhsuite/hh-suite-3.3.0/scripts/ |
H A D | pdbfilter.pl | 179 open (TMPFILE,">$root.tmp") || die ("ERROR: cannot open $root.tmp for writing: $!\n"); 180 print(TMPFILE $seq); 181 close(TMPFILE);
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/dports/biology/hmmer/hmmer-3.3/easel/devkit/ |
H A D | sedition-pp | 67 open(TMPFILE,">/tmp/tmp.pp.sedition") || die "Fatal: can't open /tmp/tmp.pp.sedition : $!\n"; 77 print TMPFILE "$start$line$end\n"; 79 } else { print TMPFILE $_;} 82 close TMPFILE;
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/dports/biology/hmmer/hmmer-3.3/testsuite/ |
H A D | i7-hmmbuild-fragments.pl | 16 open (TMPFILE, ">$tmppfx.sto") || die "FAIL: couldn't open $tmppfx.sto for writing\n"; 17 print TMPFILE << "EOF"; 28 close TMPFILE;
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/dports/biology/infernal/infernal-1.1.3/easel/devkit/ |
H A D | sedition-pp | 67 open(TMPFILE,">/tmp/tmp.pp.sedition") || die "Fatal: can't open /tmp/tmp.pp.sedition : $!\n"; 77 print TMPFILE "$start$line$end\n"; 79 } else { print TMPFILE $_;} 82 close TMPFILE;
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/dports/biology/infernal/infernal-1.1.3/hmmer/testsuite/ |
H A D | i7-hmmbuild-fragments.pl | 16 open (TMPFILE, ">$tmppfx.sto") || die "FAIL: couldn't open $tmppfx.sto for writing\n"; 17 print TMPFILE << "EOF"; 28 close TMPFILE;
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/dports/biology/mafft/mafft-7.267-without-extensions/core/ |
H A D | mafft.tmpl | 881 trap "tar cfvz debuginfo.tgz $TMPFILE; rm -rf $TMPFILE " 0 883 trap "rm -rf $TMPFILE" 0 996 "$prefix/countlen" < $TMPFILE/_addfile > $TMPFILE/addsize 2>>"$progressfile" 1012 "$prefix/countlen" < $TMPFILE/infile > $TMPFILE/size 2>>"$progressfile" 1805 outputopt=" -y -r $TMPFILE/order " 1809 outputopt=" -f -r $TMPFILE/order " 1818 cd $TMPFILE; 2277 cat < $TMPFILE/pre || exit 1 2294 cp $TMPFILE/GuideTree . 2298 cp $TMPFILE/hat2 "$infilename.hat2" [all …]
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/dports/biology/sra-tools/sra-tools-2.11.0/tools/vdb-sql/ |
H A D | 1.sh | 27 TMPFILE=`mktemp -u` 30 echo "create virtual table NGS using ngs( $ACC, style = PILEUP, ref = NC_011748.1 );" >> $TMPFILE 33 echo "select * FROM NGS WHERE DEPTH > 130;" >> $TMPFILE 35 $TOOL < $TMPFILE 37 rm $TMPFILE
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H A D | example10.sh | 6 TMPFILE=`mktemp -u` 9 echo "create virtual table FASTQ using vdb( $ACC, " >> $TMPFILE 10 echo " columns = NAME;READ;(INSDC:quality:text:phred_33)QUALITY );" >> $TMPFILE 13 echo ".separator \"\n\"" >> $TMPFILE 16 echo "select" >> $TMPFILE 17 echo " printf( '@%s.%s %s length=%d', '$ACC', NAME, NAME, length( READ ) )," >> $TMPFILE 18 echo " READ," >> $TMPFILE 20 echo " QUALITY" >> $TMPFILE 21 echo "from FASTQ LIMIT 10;" >> $TMPFILE 23 $TOOL < $TMPFILE [all …]
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H A D | example11.sh | 6 TMPFILE=`mktemp -u` 9 echo "create virtual table SRC using vdb( $ACC, " >> $TMPFILE 10 …olumns = SPOT_ID;NAME;READ;(INSDC:quality:text:phred_33)QUALITY;READ_START;READ_LEN );" >> $TMPFILE 13 echo ".separator \"\n\"" >> $TMPFILE 16 echo "select" >> $TMPFILE 18 …( '@%s.%s %s length=%s', '$ACC', SPOT_ID, NAME, json_extract( READ_LEN, '$.a[0]' ) ), " >> $TMPFILE 20 …( '+%s.%s %s length=%d', '$ACC', SPOT_ID, NAME, json_extract( READ_LEN, '$.a[0]' ) ), " >> $TMPFILE 22 …( '@%s.%s %s length=%s', '$ACC', SPOT_ID, NAME, json_extract( READ_LEN, '$.a[1]' ) ), " >> $TMPFILE 27 echo "from SRC LIMIT 12;" >> $TMPFILE 29 $TOOL < $TMPFILE [all …]
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H A D | example12.sh | 6 TMPFILE=`mktemp -u` 9 echo "create virtual table SRC using vdb( $ACC, " >> $TMPFILE 13 echo ".separator \"\n\"" >> $TMPFILE 17 echo "select" >> $TMPFILE 20 echo "json_extract( READ_LEN, '$.a[0]' )," >> $TMPFILE 21 echo "json_extract( READ_LEN, '$.a[1]' )" >> $TMPFILE 22 echo "from SRC;" >> $TMPFILE 25 echo "select" >> $TMPFILE 37 echo "from SRC, SEGMENTS LIMIT 12;" >> $TMPFILE 39 $TOOL < $TMPFILE [all …]
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H A D | example13.sh | 6 TMPFILE=`mktemp -u` 9 echo "create virtual table NGS using ngs( $ACC, style = READS );" >> $TMPFILE 12 echo ".mode line" >> $TMPFILE 15 echo "select * from NGS limit 5;" >> $TMPFILE 17 $TOOL < $TMPFILE 19 rm $TMPFILE
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