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/dports/biology/bio-mocha/bcftools-1.14/test/
H A Dtest.pl540 …,father,mother --ppl --dnm-tag DNM:log | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'");
542 …s=>"-p proband,father,mother --use-DNG | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'");
543 …s=>"-p proband,father,mother | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'");
544 …her,mother --use-DNG --dnm-tag DNM:log | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'");
545 …her,mother --dnm-tag DNM:log | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'");
546 …her,mother --use-DNG --dnm-tag DNM:log | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'");
551 …father,mother --dnm-tag DNM:log | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'");
552 …dnm2',args=>"-p proband,father,mother | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'");
553 …m2',args=>"-p 1X:proband,father,mother --use-NAIVE | $$opts{bin}/bcftools query -f'[\\t%DNM]\\n'");
554 …m2',args=>"-p 2X:proband,father,mother --use-NAIVE | $$opts{bin}/bcftools query -f'[\\t%DNM]\\n'");
[all …]
H A Dtrio-stats.2.out11 # 8) number of novel singleton alleles in the child (counted also as DNM / Mendelian error)
H A Dtrio-stats.out11 # 8) number of novel singleton alleles in the child (counted also as DNM / Mendelian error)
/dports/biology/bcftools/bcftools-1.14/test/
H A Dtest.pl540 …,father,mother --ppl --dnm-tag DNM:log | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'");
542 …s=>"-p proband,father,mother --use-DNG | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'");
543 …s=>"-p proband,father,mother | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'");
544 …her,mother --use-DNG --dnm-tag DNM:log | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'");
545 …her,mother --dnm-tag DNM:log | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'");
546 …her,mother --use-DNG --dnm-tag DNM:log | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'");
551 …father,mother --dnm-tag DNM:log | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'");
552 …dnm2',args=>"-p proband,father,mother | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'");
553 …m2',args=>"-p 1X:proband,father,mother --use-NAIVE | $$opts{bin}/bcftools query -f'[\\t%DNM]\\n'");
554 …m2',args=>"-p 2X:proband,father,mother --use-NAIVE | $$opts{bin}/bcftools query -f'[\\t%DNM]\\n'");
[all …]
H A Dtrio-stats.2.out11 # 8) number of novel singleton alleles in the child (counted also as DNM / Mendelian error)
H A Dtrio-stats.out11 # 8) number of novel singleton alleles in the child (counted also as DNM / Mendelian error)
/dports/astro/weather/weather-2.4.2/
H A Dairports.csv67946 …m","yes","YSHK","MJK",,,"https://en.wikipedia.org/wiki/Shark_Bay_Airport","DNM, Denham Airport, Mo…
/dports/math/py-heyoka/heyoka.py-0.16.0/doc/notebooks/
H A Dtides_spokes.ipynb253070 "Biz6OgO2XgVH/DNM/lco7wlk/zzfddddlJeXc+mll1JRUZG158l3q1evprKysrhf02vugOevSXYW\\\n",
505860 "AtC7d28qKioM6JAW/ggW/xSm/DNM+XzoaSTtgwEtae96jkwiOm6Gv58JDWtDT6RsaL+YSksLURRR\\\n",
736528 "JK3AlcBZ+Z9OKnJ9x6cXXBn/Fpjz+fQonycX9s4OR6AN6F5afQ/87QhoehxO/DNM+1cIIfZUkoqY\\\n",
/dports/biology/bcftools/bcftools-1.14/
H A DNEWS271 - New --use-NAIVE option for a naive DNM calling based solely on FORMAT/GT
757 - extend output to include DNM homs and recurrent DNMs
/dports/biology/bio-mocha/bcftools-1.14/
H A DNEWS271 - New --use-NAIVE option for a naive DNM calling based solely on FORMAT/GT
757 - extend output to include DNM homs and recurrent DNMs
/dports/math/pari/pari-2.13.3/src/basemath/
H A Dmftrace.c4184 GEN DNM, mf = gel(vmf,i), S = MF_get_S(mf), vj = MFnew_get_vj(mf); in mfinitcusp() local
4186 DNM = mydivisorsu(N / M); lDNM = lg(DNM); in mfinitcusp()
4193 long d = DNM[b]; in mfinitcusp()
/dports/math/py-mathics/Mathics3-2.2.0/mathics/doc/xml/
H A Ddata44817 …oJJufpECZNo0ElOQpGTRV2p4yqhZmL6cNUESi2Nolnw3PFk4buONxZxPPKJcqQozFZ/9BIlzh/0DNM+wZxHVsCkb4JrBkm1CCd…
/dports/audio/rhvoice/RHVoice-1.2.4/src/third-party/cldr/tools/java/org/unicode/cldr/util/data/external/
H A D2013-1_UNLOCODE_CodeListPart3.csv13711 ,"US","DNM","Denham Springs","Denham Springs","LA","--3-----","RQ","9307",,,
H A D2013-1_UNLOCODE_CodeListPart1.csv2395 ,"AU","DNM","Denham","Denham","WA","---4----","AI","9601",,,
8997 ,"CA","DNM","Dunmore","Dunmore","AB","-23-----","RL","0701",,"4958N 11035W",
18981 ,"DE","DNM","Dietenheim","Dietenheim","BW","--3-----","RL","0001",,,
35127 ,"FR","DNM","Dannemarie","Dannemarie",,"--3-----","RQ","9501",,,"More than one place with this name"
H A D2013-1_UNLOCODE_CodeListPart2.csv8570 ,"IE","DNM","Dunmore East","Dunmore East",,"1-------","AF","9508",,,
/dports/databases/p5-BerkeleyDB/BerkeleyDB-0.64/
H A DChanges219 * Fixed issue with DNM Filters & UTF8 support.
/dports/misc/glow/glow-f24d960e3cc80db95ac0bc17b1900dbf60ca044a/docs/
H A DLexicon.md43 * DNM
/dports/graphics/dataplot/dataplot-2c1b27601a3b7523449de612613eadeead9a8f70/src/
H A Ddp4.F2532 DNM=A(I,J+1)-A(I,J)
2533 IF (DNM.NE.0.) THEN
2534 R=(CN-A(I,J))/DNM
2547 DNM=A(I+1,J+1)-A(I,J+1)
2548 IF (DNM.NE.0.) THEN
2549 R=(CN-A(I,J+1))/DNM
2562 DNM=A(I+1,J)-A(I+1,J+1)
2563 IF (DNM.NE.0.) THEN
2577 DNM=A(I,J)-A(I+1,J)
2578 IF (DNM.NE.0.) THEN
[all …]
H A Ddp43.F34451 DNM=A(1,1)-A(1,2)
34452 IF (DNM.NE.0.) THEN
34453 R=(CN-A(1,2))/DNM
34489 DNM=A(1,1)-A(2,1)
34490 IF (DNM.NE.0.) THEN
34491 R=(CN-A(2,1))/DNM
34527 DNM=A(1,2)-A(1,1)
34528 IF (DNM.NE.0.) THEN
34529 R=(CN-A(1,1))/DNM
34565 DNM=A(2,1)-A(1,1)
[all …]
/dports/biology/bbmap/bbmap/resources/
H A Dblacklist_prokprot_merged.sketch1473 2DNM>m>o
/dports/databases/db18/db-18.1.40/lang/perl/BerkeleyDB/
H A DChanges148 * Fixed issue with DNM Filters & UTF8 support.
/dports/science/py-oddt/oddt-0.7/oddt/toolkits/extras/
H A Dpdb_residue_templates.smi13167 CCCCC(NC)C(=O)O DNM
/dports/biology/p5-BioPerl/BioPerl-1.7.7/bin/
H A Dbp_revtrans-motif416 NYV BNK BNM BNR BNS BNW BNY BKN BMN BRN BSN BWN BYN DNK DNM DNR DNS DNW DNY
/dports/biology/p5-BioPerl/BioPerl-1.7.7/lib/Bio/Tools/SeqPattern/
H A DBacktranslate.pm315 NYV BNK BNM BNR BNS BNW BNY BKN BMN BRN BSN BWN BYN DNK DNM DNR DNS DNW DNY
/dports/biology/infernal/infernal-1.1.3/hmmer/tutorial/
H A DPkinase.sto404 …T.......EKVA.LSEK.......ETR.SIMRSLLEAVNFLH.VNN...IVHRDLKPENILLD............DNM.......QIRLSDFGFSCHL…

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