/dports/biology/bio-mocha/bcftools-1.14/test/ |
H A D | test.pl | 540 …,father,mother --ppl --dnm-tag DNM:log | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'"); 542 …s=>"-p proband,father,mother --use-DNG | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'"); 543 …s=>"-p proband,father,mother | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'"); 544 …her,mother --use-DNG --dnm-tag DNM:log | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'"); 545 …her,mother --dnm-tag DNM:log | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'"); 546 …her,mother --use-DNG --dnm-tag DNM:log | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'"); 551 …father,mother --dnm-tag DNM:log | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'"); 552 …dnm2',args=>"-p proband,father,mother | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'"); 553 …m2',args=>"-p 1X:proband,father,mother --use-NAIVE | $$opts{bin}/bcftools query -f'[\\t%DNM]\\n'"); 554 …m2',args=>"-p 2X:proband,father,mother --use-NAIVE | $$opts{bin}/bcftools query -f'[\\t%DNM]\\n'"); [all …]
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H A D | trio-stats.2.out | 11 # 8) number of novel singleton alleles in the child (counted also as DNM / Mendelian error)
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H A D | trio-stats.out | 11 # 8) number of novel singleton alleles in the child (counted also as DNM / Mendelian error)
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/dports/biology/bcftools/bcftools-1.14/test/ |
H A D | test.pl | 540 …,father,mother --ppl --dnm-tag DNM:log | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'"); 542 …s=>"-p proband,father,mother --use-DNG | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'"); 543 …s=>"-p proband,father,mother | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'"); 544 …her,mother --use-DNG --dnm-tag DNM:log | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'"); 545 …her,mother --dnm-tag DNM:log | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'"); 546 …her,mother --use-DNG --dnm-tag DNM:log | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'"); 551 …father,mother --dnm-tag DNM:log | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'"); 552 …dnm2',args=>"-p proband,father,mother | $$opts{bin}/bcftools query -f'[\\t%DNM]\\t[\\t%VAF]\\n'"); 553 …m2',args=>"-p 1X:proband,father,mother --use-NAIVE | $$opts{bin}/bcftools query -f'[\\t%DNM]\\n'"); 554 …m2',args=>"-p 2X:proband,father,mother --use-NAIVE | $$opts{bin}/bcftools query -f'[\\t%DNM]\\n'"); [all …]
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H A D | trio-stats.2.out | 11 # 8) number of novel singleton alleles in the child (counted also as DNM / Mendelian error)
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H A D | trio-stats.out | 11 # 8) number of novel singleton alleles in the child (counted also as DNM / Mendelian error)
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/dports/astro/weather/weather-2.4.2/ |
H A D | airports.csv | 67946 …m","yes","YSHK","MJK",,,"https://en.wikipedia.org/wiki/Shark_Bay_Airport","DNM, Denham Airport, Mo…
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/dports/math/py-heyoka/heyoka.py-0.16.0/doc/notebooks/ |
H A D | tides_spokes.ipynb | 253070 "Biz6OgO2XgVH/DNM/lco7wlk/zzfddddlJeXc+mll1JRUZG158l3q1evprKysrhf02vugOevSXYW\\\n", 505860 "AtC7d28qKioM6JAW/ggW/xSm/DNM+XzoaSTtgwEtae96jkwiOm6Gv58JDWtDT6RsaL+YSksLURRR\\\n", 736528 "JK3AlcBZ+Z9OKnJ9x6cXXBn/Fpjz+fQonycX9s4OR6AN6F5afQ/87QhoehxO/DNM+1cIIfZUkoqY\\\n",
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/dports/biology/bcftools/bcftools-1.14/ |
H A D | NEWS | 271 - New --use-NAIVE option for a naive DNM calling based solely on FORMAT/GT 757 - extend output to include DNM homs and recurrent DNMs
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/dports/biology/bio-mocha/bcftools-1.14/ |
H A D | NEWS | 271 - New --use-NAIVE option for a naive DNM calling based solely on FORMAT/GT 757 - extend output to include DNM homs and recurrent DNMs
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/dports/math/pari/pari-2.13.3/src/basemath/ |
H A D | mftrace.c | 4184 GEN DNM, mf = gel(vmf,i), S = MF_get_S(mf), vj = MFnew_get_vj(mf); in mfinitcusp() local 4186 DNM = mydivisorsu(N / M); lDNM = lg(DNM); in mfinitcusp() 4193 long d = DNM[b]; in mfinitcusp()
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/dports/math/py-mathics/Mathics3-2.2.0/mathics/doc/xml/ |
H A D | data | 44817 …oJJufpECZNo0ElOQpGTRV2p4yqhZmL6cNUESi2Nolnw3PFk4buONxZxPPKJcqQozFZ/9BIlzh/0DNM+wZxHVsCkb4JrBkm1CCd…
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/dports/audio/rhvoice/RHVoice-1.2.4/src/third-party/cldr/tools/java/org/unicode/cldr/util/data/external/ |
H A D | 2013-1_UNLOCODE_CodeListPart3.csv | 13711 ,"US","DNM","Denham Springs","Denham Springs","LA","--3-----","RQ","9307",,,
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H A D | 2013-1_UNLOCODE_CodeListPart1.csv | 2395 ,"AU","DNM","Denham","Denham","WA","---4----","AI","9601",,, 8997 ,"CA","DNM","Dunmore","Dunmore","AB","-23-----","RL","0701",,"4958N 11035W", 18981 ,"DE","DNM","Dietenheim","Dietenheim","BW","--3-----","RL","0001",,, 35127 ,"FR","DNM","Dannemarie","Dannemarie",,"--3-----","RQ","9501",,,"More than one place with this name"
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H A D | 2013-1_UNLOCODE_CodeListPart2.csv | 8570 ,"IE","DNM","Dunmore East","Dunmore East",,"1-------","AF","9508",,,
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/dports/databases/p5-BerkeleyDB/BerkeleyDB-0.64/ |
H A D | Changes | 219 * Fixed issue with DNM Filters & UTF8 support.
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/dports/misc/glow/glow-f24d960e3cc80db95ac0bc17b1900dbf60ca044a/docs/ |
H A D | Lexicon.md | 43 * DNM
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/dports/graphics/dataplot/dataplot-2c1b27601a3b7523449de612613eadeead9a8f70/src/ |
H A D | dp4.F | 2532 DNM=A(I,J+1)-A(I,J) 2533 IF (DNM.NE.0.) THEN 2534 R=(CN-A(I,J))/DNM 2547 DNM=A(I+1,J+1)-A(I,J+1) 2548 IF (DNM.NE.0.) THEN 2549 R=(CN-A(I,J+1))/DNM 2562 DNM=A(I+1,J)-A(I+1,J+1) 2563 IF (DNM.NE.0.) THEN 2577 DNM=A(I,J)-A(I+1,J) 2578 IF (DNM.NE.0.) THEN [all …]
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H A D | dp43.F | 34451 DNM=A(1,1)-A(1,2) 34452 IF (DNM.NE.0.) THEN 34453 R=(CN-A(1,2))/DNM 34489 DNM=A(1,1)-A(2,1) 34490 IF (DNM.NE.0.) THEN 34491 R=(CN-A(2,1))/DNM 34527 DNM=A(1,2)-A(1,1) 34528 IF (DNM.NE.0.) THEN 34529 R=(CN-A(1,1))/DNM 34565 DNM=A(2,1)-A(1,1) [all …]
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/dports/biology/bbmap/bbmap/resources/ |
H A D | blacklist_prokprot_merged.sketch | 1473 2DNM>m>o
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/dports/databases/db18/db-18.1.40/lang/perl/BerkeleyDB/ |
H A D | Changes | 148 * Fixed issue with DNM Filters & UTF8 support.
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/dports/science/py-oddt/oddt-0.7/oddt/toolkits/extras/ |
H A D | pdb_residue_templates.smi | 13167 CCCCC(NC)C(=O)O DNM
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/dports/biology/p5-BioPerl/BioPerl-1.7.7/bin/ |
H A D | bp_revtrans-motif | 416 NYV BNK BNM BNR BNS BNW BNY BKN BMN BRN BSN BWN BYN DNK DNM DNR DNS DNW DNY
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/dports/biology/p5-BioPerl/BioPerl-1.7.7/lib/Bio/Tools/SeqPattern/ |
H A D | Backtranslate.pm | 315 NYV BNK BNM BNR BNS BNW BNY BKN BMN BRN BSN BWN BYN DNK DNM DNR DNS DNW DNY
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/dports/biology/infernal/infernal-1.1.3/hmmer/tutorial/ |
H A D | Pkinase.sto | 404 …T.......EKVA.LSEK.......ETR.SIMRSLLEAVNFLH.VNN...IVHRDLKPENILLD............DNM.......QIRLSDFGFSCHL…
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