| /dports/biology/minimap2/minimap2-2.24/python/ |
| H A D | README.rst | 195 recognizes IUB code and preserves the letter cases. Uracil :code:`U` is
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| /dports/audio/guitarix-lv2/guitarix-0.43.1/tools/ampsim/tensbs/ |
| H A D | bint4.f | 102 INTEGER I, IBCL, IBCR, IFLAG, ILB, ILEFT, IT, IUB, IW, IWP, J,
206 IUB = 2 - IW
209 CALL BNFAC(W(IWP,1), NWROW, N, ILB, IUB, IFLAG)
211 CALL BNSLV(W(IWP,1), NWROW, N, ILB, IUB, BCOEF)
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| /dports/lang/ruby26/ruby-2.6.9/benchmark/ |
| H A D | so_k_nucleotide.yml | 81 make_random_fasta('TWO', 'IUB ambiguity codes', iub, n*3)
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| H A D | so_reverse_complement.yml | 81 make_random_fasta('TWO', 'IUB ambiguity codes', iub, n*3)
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| /dports/science/nwchem/nwchem-7b21660b82ebd85ef659f6fba7e1e73433b0bd0a/contrib/pdb_tools/pdb_amber2nwchem/ |
| H A D | README.md | 21 - [1] "IUPAC-IUB Commission on Biochemical Nomenclature.
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| /dports/science/gromacs/gromacs-2021.4/share/top/ |
| H A D | atom_nom.tbl | 5 # BMRB = System in use at BioMagResBank (IUPAC/IUB Biochemistry 9, 3471-3479
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| /dports/science/gromacs/gromacs-2021.4/docs/reference-manual/functions/ |
| H A D | bonded-interactions.rst | 470 Proper dihedral angles are defined according to the IUPAC/IUB
731 should go from -180 up to and including 180 degrees; the IUPAC/IUB
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| /dports/science/gromacs/gromacs-2021.4/docs/reference-manual/ |
| H A D | references.rst | 1820 :sup:`129` IUPAC-IUB Commission on Biochemical Nomenclature,
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| /dports/lang/gawk/gawk-5.1.1/doc/ |
| H A D | gawkinet.texi | 4179 IUB/IUPAC amino acid and nucleic acid codes,
4495 @item IUB/IUPAC Amino Acid and Nucleic Acid Codes
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| H A D | wordlist4 | 90 IUB
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| /dports/biology/ugene/ugene-40.1/src/plugins/external_tool_support/transl/ |
| H A D | russian.ts | 1713 <source>IUB</source>
1714 <translation>IUB</translation>
8170 …IUB - The default scoring matrix used by BESTFIT for the comparison of nucleic acid sequences. All…
8171 …IUB - дефолтная матрица, используемая BESTFIT для сравнения нуклеотидных последовательностей. Все …
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| H A D | turkish.ts | 1716 <source>IUB</source>
1717 <translation>IUB</translation>
8179 …IUB - The default scoring matrix used by BESTFIT for the comparison of nucleic acid sequences. All…
8180 …IUB - BESTFIT tarafından nükleik asit dizilerinin karşılaştırılması için kullanılan varsayılan pua…
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| /dports/biology/ugene/ugene-40.1/data/cmdline/ |
| H A D | align-clustalw.uwl | 65 …IUB - The default scoring matrix used by BESTFIT for the comparison of nucleic acid sequences. All…
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| /dports/lang/gcc10-devel/gcc-10-20211008/gcc/testsuite/go.test/test/bench/shootout/ |
| H A D | fasta-1000.out | 36 >TWO IUB ambiguity codes
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| /dports/lang/gcc9-devel/gcc-9-20211007/gcc/testsuite/go.test/test/bench/shootout/ |
| H A D | fasta-1000.out | 36 >TWO IUB ambiguity codes
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| /dports/lang/gcc9/gcc-9.4.0/gcc/testsuite/go.test/test/bench/shootout/ |
| H A D | fasta-1000.out | 36 >TWO IUB ambiguity codes
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| /dports/lang/gcc8/gcc-8.5.0/gcc/testsuite/go.test/test/bench/shootout/ |
| H A D | fasta-1000.out | 36 >TWO IUB ambiguity codes
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| /dports/lang/chibi-scheme/chibi-scheme-0.10/benchmarks/gabriel/ |
| H A D | nucleic2.sch | 530 ; IUPAC-IUB Joint Commission on Biochemical Nomenclature (JCBN)
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| /dports/biology/abyss/abyss-2.3.1/ |
| H A D | ChangeLog | 967 sequence uses IUPAC-IUB ambiguity codes. DIALIGN-TX is used for
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| /dports/lang/gcc10/gcc-10.3.0/gcc/testsuite/go.test/test/bench/shootout/ |
| H A D | fasta-1000.out | 36 >TWO IUB ambiguity codes
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| /dports/audio/rhvoice/RHVoice-1.2.4/src/third-party/cldr/tools/java/org/unicode/cldr/util/data/external/ |
| H A D | 2013-1_UNLOCODE_CodeListPart3.csv | 3854 ,"PY","IUB","Iturbe","Iturbe","4","-----6--","RQ","1007",,"2603S 05629W",
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| H A D | 2013-1_UNLOCODE_CodeListPart1.csv | 7020 ,"BR","IUB","Ituiutaba","Ituiutaba","MG","--3-----","RQ","0607",,,
18318 "+","DE","IUB","Briest bei L�btheen","Briest bei Lubtheen","MV","--3-----","RL","1301",,"5314N 0110…
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| /dports/devel/binaryen/binaryen-version_98/test/ |
| H A D | fasta.cpp | 39 struct IUB { struct
48 Cumulative( IUB *start ) { in Cumulative() argument
50 for ( IUB *iter = start; iter->c; ++iter ) { in Cumulative()
66 IUB *iter = table[(unsigned int )( pct * slots )]; in operator []()
73 IUB *table[slots + 1];
139 Randomized( IUB *start ) : table(start) {} in Randomized()
149 IUB iub[] = {
169 IUB homosapiens[] = {
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| /dports/devel/emscripten/emscripten-2.0.3/tests/core/ |
| H A D | test_constglobalstructs.c | 9 struct IUB { struct
15 struct IUB iub[] = {{'a', 0.27, 5}, {'c', 0.15, 4}, {'g', 0.12, 3}, {'t', 0.27, 2}, }; argument
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| H A D | test_conststructs.c | 9 struct IUB { struct
17 struct IUB iub[] = {{'a', 0.3029549426680, 5}, in main() argument
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