| /dports/biology/bbmap/bbmap/resources/ |
| H A D | blacklist_silva_merged.sketch | 33 JDJ<GRP5
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| /dports/biology/samtools/samtools-1.14/test/mpileup/expected/ |
| H A D | 13.out | 2943 17 2943 N 9 gGGGGgGGG JDJ;GJHIC
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| H A D | 14.out | 2943 17 2943 N 9 gGGGGgGGG JDJ;GJHIC 5 ggGgG LHBJH 3 GgG 9>G
3910 17 3910 N 23 AAAAaAAaaaaAaaaAAAAaaaa H<GCADCAGIGEIHKEGHGF@>? 7 AaaaAaA HGCCIGE 10 AaaaaaAaaa JDJ>II…
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| H A D | 15.out | 2943 17 2943 N 9 gGGGGgGGG JDJ;GJHIC 5 ggGgG LHBJH 3 GgG 9>G
3910 17 3910 N 23 AAAAaAAaaaaAaaaAAAAaaaa H<GCADCAGIGEIHKEGHGF@>? 7 AaaaAaA HGCCIGE 10 AaaaaaAaaa JDJ>II…
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| H A D | 16.out | 2943 17 2943 G 9 ,....,... JDJ;GJHIC
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| H A D | 17.out | 2943 17 2943 G 9 ,....,... JDJ;GJHIC
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| H A D | 18.out | 2943 17 2943 G 9 ,....,... JDJ;GJHIC
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| H A D | 19.out | 2943 17 2943 G 9 ,....,... JDJ;GJHIC
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| H A D | 21.out | 2943 17 2943 G 9 ,....,... JDJ;GJHIC
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| H A D | 22.out | 2943 17 2943 G 9 ,....,... JDJ;GJHIC
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| H A D | 28.out | 2943 17 2943 G 10 ,...,.,... JDJ;*GJHIC
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| H A D | 37.out | 2943 17 2943 N 9 gGGGGgGGG JDJ;GJHIC
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| H A D | 76.out | 2943 17 2943 G 10 ,...,.,... JDJ;*GJHIC ]]]]]]]]]]
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| H A D | 77.out | 2943 17 2943 G 10 ,...,.,... JDJ;*GJHIC 86,83,57,56,52,44,44,39,27,22
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| H A D | 78.out | 2943 17 2943 N 9 gGGGGgGGG JDJ;GJHIC
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| H A D | mp1_d.out | 2943 17 2943 N 9 gGGGGgGGG JDJ;GJHIC
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| H A D | mp1_dd.out | 2943 17 2943 N 9 gGGGGgGGG JDJ;GJHIC
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| H A D | mp1_ends.out | 2943 17 2943 N 9 gGGGGgGGG JDJ;GJHIC
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| H A D | mp1_i.out | 2943 17 2943 N 9 gGGGGgGGG JDJ;GJHIC
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| H A D | mp1_ii.out | 2943 17 2943 N 9 gGGGGgGGG JDJ;GJHIC
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| H A D | mp1_iidd.out | 2943 17 2943 N 9 gGGGGgGGG JDJ;GJHIC
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| /dports/cad/gmsh/gmsh-4.9.2-source/Numeric/ |
| H A D | CondNumBasis.cpp | 521 fullMatrix<double> JDJ(nCondNumNodes, 3 * _nMapNodes + 1); in getInvCondNumAndGradientsGeneral() local
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| H A D | JacobianBasis.cpp | 75 fullMatrix<double> &JDJ) in calcJDJ1D() argument
83 JDJ(i, 3 * numMapNodes) = in calcJDJ1D()
107 JDJ(i, 3 * numMapNodes) = in calcJDJ2D()
135 JDJ(i, 3 * numMapNodes) = in calcJDJ3D()
698 fullMatrix<double> &JDJ) const in getSignedJacAndGradientsGeneral()
704 JDJ(i, j) = 0.; in getSignedJacAndGradientsGeneral()
705 JDJ(i, j + 1 * numMapNodes) = 0.; in getSignedJacAndGradientsGeneral()
706 JDJ(i, j + 2 * numMapNodes) = 0.; in getSignedJacAndGradientsGeneral()
708 JDJ(i, 3 * numMapNodes) = 1.; in getSignedJacAndGradientsGeneral()
742 JDJ); in getSignedJacAndGradientsGeneral()
[all …]
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| H A D | JacobianBasis.h | 97 fullMatrix<double> &JDJ) const in getSignedJacAndGradients() argument
101 _gradBasis->dShapeMat_dZ, nodesXYZ, normals, JDJ); in getSignedJacAndGradients()
105 fullMatrix<double> &JDJ) const in getSignedJacAndGradientsFast() argument
109 nodesXYZ, normals, JDJ); in getSignedJacAndGradientsFast()
113 fullMatrix<double> &JDJ) const in getSignedIdealJacAndGradients() argument
118 normals, JDJ); in getSignedIdealJacAndGradients()
228 fullMatrix<double> &JDJ) const;
235 fullMatrix<double> &JDJ) const;
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| /dports/cad/gmsh/gmsh-4.9.2-source/contrib/MeshOptimizer/ |
| H A D | Patch.cpp | 410 fullMatrix<double> JDJ(numSamplingPnts, 3 * numMapNodes + 1); in scaledJacAndGradients() local
423 jacBasis->getSignedJacAndGradients(nodesXYZ, _jacNormEl[iEl], JDJ); in scaledJacAndGradients()
424 if(_dim == 3) JDJ.scale(_invStraightJac[iEl]); in scaledJacAndGradients()
427 bezierCoeff BDB(jacBasis->getFuncSpaceData(), JDJ); in scaledJacAndGradients()
789 fullMatrix<double> JDJ(numSamplingPnts, 3 * numMapNodes + 1); in idealJacAndGradients() local
802 jacBasis->getSignedIdealJacAndGradients(nodesXYZ, _IJacNormEl[iEl], JDJ); in idealJacAndGradients()
803 if(_dim == 3) JDJ.scale(_invIJac[iEl]); in idealJacAndGradients()
806 bezierCoeff BDB(jacBasis->getFuncSpaceData(), JDJ); in idealJacAndGradients()
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