Searched refs:SCAN_WINDOW (Results 1 – 1 of 1) sorted by relevance
4145 #define SCAN_WINDOW 49 // odd number!!! macro4213 vector<double> coverage_raw(mrna_len+SCAN_WINDOW); in CChain()4229 for(int i = 0; i < SCAN_WINDOW; ++i) in CChain()4230 cov += coverage_raw[i]/SCAN_WINDOW; in CChain()4233 cov -= coverage_raw[i]/SCAN_WINDOW; in CChain()4234 cov += coverage_raw[i+SCAN_WINDOW]/SCAN_WINDOW; in CChain()5599 for(int i = right_limit-SCAN_WINDOW/2; i <= right_limit+SCAN_WINDOW/2; ++i) in ClipLowCoverageUTR()5699 if(first_drop+SCAN_WINDOW/2 < mrna_len) { in CalculateDropLimits()5701 …if(m_coverage[first_drop-SCAN_WINDOW/2] >= m_coverage[first_drop+SCAN_WINDOW/2]) // check for neg… in CalculateDropLimits()5734 if(first_drop-SCAN_WINDOW/2 > 0) { in CalculateDropLimits()[all …]