/dports/audio/libbpm/libbpm-0.3/documentation/latex/ |
H A D | group__dsp.tex | 187 #include <TFile.h> 214 TFile *rootfile = new TFile( "dsp.root", "recreate" );
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/dports/audio/libopenmpt/libopenmpt-0.6.0+release.autotools/soundlib/ |
H A D | UMXTools.cpp | 108 template <typename TFile> 109 static bool FindNameTableEntryImpl(TFile &file, const FileHeader &fileHeader, const char *name) in FindNameTableEntryImpl()
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/dports/audio/py-mutagen/mutagen-1.42.0/tests/ |
H A D | test___init__.py | 546 class TFile(TestCase): class
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/dports/biology/emboss/EMBOSS-6.6.0/emboss/ |
H A D | dbiblast.c | 187 PMemFile TFile; member 523 ajStrAssignS(&divfiles[jfile], db->TFile->Name); in main() 891 dbiblast_memfclosefile(&db->TFile); in dbiblast_dbfree() 934 PMemFile TFile = NULL; in dbiblast_blastopenlib() local 957 TFile = dbiblast_memfopenfile(tname); in dbiblast_blastopenlib() 959 if(TFile) in dbiblast_blastopenlib() 963 if(!TFile) in dbiblast_blastopenlib() 970 ret->TFile = TFile; in dbiblast_blastopenlib() 977 if(!ret->TFile) in dbiblast_blastopenlib() 1900 dbiblast_memfseek(db->TFile, top + 4*(pos), 0); in dbiblast_loadtable() [all …]
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/objtools/blast/seqdb_writer/ |
H A D | writedb_files.hpp | 163 typedef ofstream TFile; typedef in CWriteDB_File 200 TFile m_RealFile; ///< Actual stream implementing the output file.
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/util/compress/ |
H A D | compress.hpp | 265 typedef void* TFile; typedef in CCompressionFile 298 TFile m_File; ///< File handler.
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H A D | tar.hpp | 391 typedef pair<string, Uint8> TFile; typedef in CTar 392 typedef list<TFile> TFiles;
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/objtools/blast/seqdb_writer/ |
H A D | writedb_files.hpp | 163 typedef ofstream TFile; typedef in CWriteDB_File 200 TFile m_RealFile; ///< Actual stream implementing the output file.
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/util/compress/ |
H A D | compress.hpp | 265 typedef void* TFile; typedef in CCompressionFile 298 TFile m_File; ///< File handler.
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H A D | tar.hpp | 391 typedef pair<string, Uint8> TFile; typedef in CTar 392 typedef list<TFile> TFiles;
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/connect/test/ |
H A D | test_ncbi_ftp_download.cpp | 141 void Append(const CTar::TFile* current = 0); 153 CTar::TFile m_Current; // Current file name with size 191 void CDownloadCallbackData::Append(const CTar::TFile* current) in Append() 226 TFile file(current.GetName(), current.GetSize()); in Checkpoint() 328 CTar::TFile file = make_pair(m_Dlcbdata->GetFilename(), filesize); in Run() 356 CTar::TFile file = make_pair(line, (Uint8) 0); in Run()
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/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/align/ |
H A D | align_base.h | 477 template <typename TFile, typename TSource, typename TSpec> 479 write(TFile & target,
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H A D | dp_traceback_adaptor.h | 47 template <typename TFile, typename TSeq0Value, typename TSeq1Value> 48 inline void _writeTraceSegmentToFile(TFile & file, TSeq0Value const & seq0Val, TSeq1Value const & s… in _writeTraceSegmentToFile() 182 template <typename TFile, typename TSequenceH, typename TSequenceV, typename TPosition, typename TS… 185 _adaptTraceSegmentsTo(TFile & file, in _adaptTraceSegmentsTo()
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/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/consensus/ |
H A D | consensus_base.h | 1132 template<typename TFile, typename TSpec, typename TConfig> 1135 TFile & file, in write() 1148 typename DirectionIterator<TFile, Output>::Type target = directionIterator(file, Output()); in write() 1321 template<typename TFile, typename TSpec, typename TConfig, typename TFilePath> 1323 _convertSimpleReadFile(TFile& /*file*/, in _convertSimpleReadFile() argument 1759 template<typename TFile, typename TSpec, typename TConfig> 1761 _writeCeleraFrg(TFile& file, in _writeCeleraFrg() 1769 typename DirectionIterator<TFile, Output>::Type target = directionIterator(file, Output()); in _writeCeleraFrg() 1824 template<typename TFile, typename TSpec, typename TConfig> 1826 _writeCeleraCgb(TFile& file, in _writeCeleraCgb() [all …]
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/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/file/ |
H A D | file_base.h | 226 template < typename TFile, typename TValue, typename TSize, typename TPos > 227 inline bool readAt(TFile & me, TValue *memPtr, TSize const count, TPos const fileOfs) in readAt() 230 typedef typename Position<TFile>::Type pos_t; in readAt() 249 template < typename TFile, typename TValue, typename TSize, typename TPos > 250 inline bool writeAt(TFile & me, TValue const *memPtr, TSize const count, TPos const fileOfs) in writeAt() 253 typedef typename Position<TFile>::Type pos_t; in writeAt()
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H A D | file_mapping.h | 155 typedef File<Async<> > TFile; typedef 156 typedef typename Size<TFile>::Type TFileSize; 167 TFile file; 204 public Size<typename FileMapping<TSpec>::TFile> {}; 362 template <typename TSpec, typename TFile> 364 open(FileMapping<TSpec> &mapping, TFile const &file)
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H A D | file_page.h | 400 typename TFile, 474 typename TFile, 480 typename TFile, 617 bool readPage(int pageNo, Buffer<TValue, PageFrame<TFile, TSpec> > &pf, TFile &file) 639 bool unmapPage(Buffer<TValue, PageFrame<TFile, TSpec> > &pf, TFile &) 653 bool mapReadPage(Buffer<TValue, PageFrame<TFile, TSpec> > &pf, TFile &file, TSize size) 741 bool writePage(Buffer<TValue, PageFrame<TFile, TSpec> > &pf, int pageNo, TFile &file) 854 bool cancel(Buffer<TValue, PageFrame<TFile, TSpec> > &pf, TFile &file) 871 bool readPage(Buffer<TValue, PageFrame<TFile, Dynamic> > &pf, TFile &file) 881 bool writePage(Buffer<TValue, PageFrame<TFile, Dynamic> > &pf, TFile &file) [all …]
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H A D | string_external.h | 159 typedef TFile_ TFile; typedef 176 typedef TFile_ TFile; typedef 190 typedef TFile_ TFile; typedef 1113 typedef typename TConfig::TFile TFile; 1117 typedef Buffer<TValue, PageFrame<TFile, Fixed<PAGESIZE> > > TPageFrame; 1123 TFile file; 1165 String(TFile &_file) : 1172 String(const char *fileName, int openMode = DefaultOpenMode<TFile>::VALUE) : 1820 typedef typename TExtString::TFile TFile; 1822 return open(me, fileName, DefaultOpenMode<TFile>::VALUE); [all …]
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H A D | string_mmap.h | 86 typedef TFile_ TFile; typedef 140 typedef typename TConfig::TFile TFile; typedef 160 String(TFile &_file): in String() 371 typedef typename Size<typename TConfig::TFile>::Type TFileSize; 397 typedef typename Size<typename TConfig::TFile>::Type TFileSize; 428 typedef typename Size<typename TConfig::TFile>::Type TFileSize; 452 typedef typename Size<typename TConfig::TFile>::Type TFileSize; 597 typedef typename String<TValue, MMap<TConfig> >::TFile TFile; 598 return open(me, fileName, DefaultOpenMode<TFile>::VALUE); 603 open(String<TValue, MMap<TConfig> > &me, typename TConfig::TFile file) [all …]
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/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/find/ |
H A D | find_horspool.h | 298 template <typename TFormat, typename TFile, typename TSpec> 302 template <typename TValue, typename TFormat, typename TFile, typename FileReaderTSpec, typename TFi… 304 _findHorspool(Finder<String<TValue, FileReader<TFormat, TFile, FileReaderTSpec> >, TFinderSpec > & … in _findHorspool() argument 309 …typedef Finder<String<TValue, FileReader<TFormat, TFile, FileReaderTSpec> >, TFinderSpec > TFinder; in _findHorspool()
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/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/graph_align/ |
H A D | graph_impl_align.h | 711 template <typename TFile, typename TStringSet, typename TCargo, typename TSpec> 713 write(TFile & target, 835 template <typename TFile, typename TSpec, typename TNames> 837 write(TFile & file, 847 typename DirectionIterator<TFile, Output>::Type target = directionIterator(file, Output()); 874 template <typename TFile, typename TSpec, typename TNames> 876 write(TFile & file, 939 template <typename TFile, typename TStringSet, typename TSpec, typename TEdge> 941 _writeCargo(TFile & file, 951 _writeCargo(TFile & file, [all …]
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/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/graph_msa/ |
H A D | graph_align_tcoffee_io.h | 119 read(TFile & file, in read() 260 read(TFile & file, in read() 304 void write(TFile & file, in write() 389 read(TFile & file, in read() 506 read(TFile & file, in read() 515 typedef typename Value<TFile>::Type TValue; in read() 613 read(TFile & file, in read() 706 void write(TFile & file, in write() 768 void write(TFile & file, in write() 829 read(TFile & file, in read() [all …]
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/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/graph_types/ |
H A D | graph_drawing.h | 323 _writeGraphFooter(TFile &, in _writeGraphFooter() argument 335 _writeGraphFooter(TFile &, in _writeGraphFooter() argument 347 _writeGraphFooter(TFile &, in _writeGraphFooter() argument 360 _writeGraphFooter(TFile &, in _writeGraphFooter() argument 372 _writeGraphType(TFile & file, in _writeGraphType() 420 _writeEdgeType(TFile & file, in _writeEdgeType() 432 _writeEdgeType(TFile & file, in _writeEdgeType() 444 _writeEdgeType(TFile & file, in _writeEdgeType() 456 _writeEdgeType(TFile & file, in _writeEdgeType() 546 TFile & file, in writeRecords() [all …]
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H A D | graph_impl_automaton.h | 630 template<typename TFile, typename TAlphabet, typename TCargo, typename TSpec> 632 write(TFile & target, in write()
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H A D | graph_impl_directed.h | 651 template <typename TFile, typename TCargo, typename TSpec> 653 write(TFile & target, in write()
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