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/dports/astro/py-astropy/astropy-5.0/astropy/io/fits/
H A Dfitsrec.py1175 def _scale_back_strings(self, col_idx, input_field, output_field): argument
1203 self._coldefs[col_idx].name,
1217 def _scale_back_ascii(self, col_idx, input_field, output_field): argument
1228 format = self._coldefs[col_idx].format
1235 if col_idx > 0:
1236 lead = starts[col_idx] - starts[col_idx - 1] - spans[col_idx - 1]
1242 'column.'.format(col_idx + 1))
1244 trail = starts[col_idx + 1] - starts[col_idx] - spans[col_idx]
1248 'column.'.format(col_idx + 1))
1271 if len(value) > starts[col_idx + 1] - starts[col_idx]:
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/dports/astro/py-astropy/astropy-5.0/astropy/io/fits/hdu/
H A Dtable.py226 def _update_column_removed(self, columns, col_idx): argument
600 def _update_column_attribute_changed(self, column, col_idx, attr, argument
609 keyword = base_keyword + str(col_idx + 1)
624 before_keyword += str(col_idx + 1)
631 after_keyword += str(col_idx + 1)
/dports/audio/gnome-podcasts/podcasts-c86f7bfdef7692bbf20f315a90450321f6ca9ce7/cargo-crates/diesel-1.4.8/src/mysql/connection/stmt/
H A Diterator.rs42 col_idx: 0, in next()
52 col_idx: usize, field
58 let current_idx = self.col_idx; in take()
59 self.col_idx += 1; in take()
64 (0..count).all(|i| self.binds.field_data(self.col_idx + i).is_none()) in next_is_null()
/dports/audio/gnome-podcasts/podcasts-c86f7bfdef7692bbf20f315a90450321f6ca9ce7/cargo-crates/diesel-1.4.8/src/pg/connection/
H A Dresult.rs75 pub fn get(&self, row_idx: usize, col_idx: usize) -> Option<&[u8]> { in get()
76 if self.is_null(row_idx, col_idx) { in get()
80 let col_idx = col_idx as libc::c_int; in get() localVariable
83 PQgetvalue(self.internal_result.as_ptr(), row_idx, col_idx) as *const u8; in get()
84 let num_bytes = PQgetlength(self.internal_result.as_ptr(), row_idx, col_idx); in get()
90 pub fn is_null(&self, row_idx: usize, col_idx: usize) -> bool { in is_null()
95 col_idx as libc::c_int, in is_null()
H A Drow.rs9 col_idx: usize, field
17 col_idx: 0, in new()
24 let current_idx = self.col_idx; in take()
25 self.col_idx += 1; in take()
30 (0..count).all(|i| self.db_result.is_null(self.row_idx, self.col_idx + i)) in next_is_null()
/dports/biology/hhsuite/hh-suite-3.3.0/src/cs/
H A Dalignment.h135 size_t col_idx(size_t i) const { return match_idx_[i]; } in col_idx() function
/dports/biology/hyphy/hyphy-2.5.33/src/core/
H A Dtree_evaluator.cpp384 for (long col_idx = 0; col_idx < D; col_idx++, tT+=D) { in __ll_handle_block10_product_sum() local
385 if (childVector[col_idx] > 0.) { in __ll_handle_block10_product_sum()
386 __m128d C = _mm_set1_pd(childVector[col_idx]); in __ll_handle_block10_product_sum()
441 for (long col_idx = 0; col_idx < D; col_idx++, tT+=D) { in __ll_handle_block10_product_sum() local
442 if (childVector[col_idx] > 0.) { in __ll_handle_block10_product_sum()
443 float64x2_t C = vdupq_n_f64(childVector[col_idx]); in __ll_handle_block10_product_sum()
491 for (long col_idx = 0; col_idx < D; col_idx++, tT+=D) { in __ll_handle_block20_product_sum() local
492 if (childVector[col_idx] > 0.) { in __ll_handle_block20_product_sum()
493 __m256d C = _mm256_set1_pd(childVector[col_idx]); in __ll_handle_block20_product_sum()
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/util/bitset/
H A Dbmbuffer.h611 value_type get(size_type row_idx, size_type col_idx) const BMNOEXCEPT in get() argument
614 BM_ASSERT(col_idx < COLS); in get()
617 return ((const value_type*)buf)[col_idx]; in get()
769 value_type get(size_type row_idx, size_type col_idx) BMNOEXCEPT in get() argument
772 BM_ASSERT(col_idx < cols_); in get()
774 return r[col_idx]; in get()
780 BM_ASSERT(col_idx < cols_); in get()
782 return r[col_idx]; in get()
785 void set(size_type row_idx, size_type col_idx, value_type v) BMNOEXCEPT in set() argument
788 BM_ASSERT(col_idx < cols_); in set()
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/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/util/
H A Dncbi_table.hpp104 void AssociateColumn(const TColumn& col, unsigned int col_idx);
149 const TValueType& GetCell(unsigned int row_idx, unsigned int col_idx) const;
152 TValueType& GetCell(unsigned int row_idx, unsigned int col_idx);
290 unsigned int col_idx) in AssociateColumn() argument
294 m_ColumnMap.insert(pair<TColumn, unsigned int>(col, col_idx)); in AssociateColumn()
468 unsigned int col_idx) const in GetCell()
471 return r[col_idx]; in GetCell()
477 unsigned int col_idx) in GetCell() argument
480 return r[col_idx]; in GetCell()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/util/bitset/
H A Dbmbuffer.h611 value_type get(size_type row_idx, size_type col_idx) const BMNOEXCEPT in get() argument
614 BM_ASSERT(col_idx < COLS); in get()
617 return ((const value_type*)buf)[col_idx]; in get()
769 value_type get(size_type row_idx, size_type col_idx) BMNOEXCEPT in get() argument
772 BM_ASSERT(col_idx < cols_); in get()
774 return r[col_idx]; in get()
780 BM_ASSERT(col_idx < cols_); in get()
782 return r[col_idx]; in get()
785 void set(size_type row_idx, size_type col_idx, value_type v) BMNOEXCEPT in set() argument
788 BM_ASSERT(col_idx < cols_); in set()
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/util/
H A Dncbi_table.hpp104 void AssociateColumn(const TColumn& col, unsigned int col_idx);
149 const TValueType& GetCell(unsigned int row_idx, unsigned int col_idx) const;
152 TValueType& GetCell(unsigned int row_idx, unsigned int col_idx);
290 unsigned int col_idx) in AssociateColumn() argument
294 m_ColumnMap.insert(pair<TColumn, unsigned int>(col, col_idx)); in AssociateColumn()
468 unsigned int col_idx) const in GetCell()
471 return r[col_idx]; in GetCell()
477 unsigned int col_idx) in GetCell() argument
480 return r[col_idx]; in GetCell()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/dbapi/driver/ftds100/freetds/tds/unittests/
H A Dt0002.c27 value_as_string(TDSSOCKET * tds, int col_idx) in value_as_string() argument
30 const int type = tds->res_info->columns[col_idx]->column_type; in value_as_string()
31 const void *value = tds->res_info->columns[col_idx]->column_data; in value_as_string()
H A Dt0004.c25 varchar_as_string(TDSSOCKET * tds, int col_idx) in varchar_as_string() argument
28 const void *value = tds->res_info->columns[col_idx]->column_data; in varchar_as_string()
H A Dt0005.c24 static char *value_as_string(TDSSOCKET * tds, int col_idx);
104 value_as_string(TDSSOCKET * tds, int col_idx) in value_as_string() argument
107 const int type = tds->res_info->columns[col_idx]->column_type; in value_as_string()
108 const void *value = tds->res_info->columns[col_idx]->column_data; in value_as_string()
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/dbapi/driver/ftds95/freetds/tds/unittests/
H A Dt0002.c26 value_as_string(TDSSOCKET * tds, int col_idx) in value_as_string() argument
29 const int type = tds->res_info->columns[col_idx]->column_type; in value_as_string()
30 const void *value = tds->res_info->columns[col_idx]->column_data; in value_as_string()
H A Dt0004.c27 varchar_as_string(TDSSOCKET * tds, int col_idx) in varchar_as_string() argument
30 const void *value = tds->res_info->columns[col_idx]->column_data; in varchar_as_string()
H A Dt0005.c26 static char *value_as_string(TDSSOCKET * tds, int col_idx);
106 value_as_string(TDSSOCKET * tds, int col_idx) in value_as_string() argument
109 const int type = tds->res_info->columns[col_idx]->column_type; in value_as_string()
110 const void *value = tds->res_info->columns[col_idx]->column_data; in value_as_string()
/dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/interfaces/vdb/
H A Dcursor.h309 struct VBlob const **blob, uint32_t col_idx );
311 struct VBlob const **blob, int64_t row_id, uint32_t col_idx );
339 VDB_EXTERN rc_t CC VCursorRead ( const VCursor *self, uint32_t col_idx,
341 VDB_EXTERN rc_t CC VCursorReadDirect ( const VCursor *self, int64_t row_id, uint32_t col_idx,
371 VDB_EXTERN rc_t CC VCursorReadBits ( const VCursor *self, uint32_t col_idx,
374 VDB_EXTERN rc_t CC VCursorReadBitsDirect ( const VCursor *self, int64_t row_id, uint32_t col_idx,
395 VDB_EXTERN rc_t CC VCursorCellData ( const VCursor *self, uint32_t col_idx,
399 uint32_t col_idx, uint32_t *elem_bits, const void **base,
422 const int64_t * row_ids, uint32_t col_idx, uint32_t num_rows,
440 VDB_EXTERN rc_t CC VCursorDefault ( VCursor *self, uint32_t col_idx,
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H A Dcursor.hpp225 inline rc_t Read ( uint32_t col_idx, uint32_t elem_bits, in Read()
228 return VCursorRead ( this, col_idx, elem_bits, buffer, blen, row_len ); in Read()
230 inline rc_t Read ( int64_t row_id, uint32_t col_idx, uint32_t elem_bits, in Read()
261 inline rc_t ReadBits ( const VCursor *self, uint32_t col_idx, in ReadBits()
265 return VCursorReadBits ( this, col_idx, elem_bits, start, in ReadBits()
272 return VCursorReadBitsDirect ( this, row_id, col_idx, elem_bits, in ReadBits()
292 inline rc_t CellData ( uint32_t col_idx, uint32_t *elem_bits, in CellData()
300 return VCursorCellDataDirect ( this, row_id, col_idx, elem_bits, in CellData()
317 inline rc_t Default ( uint32_t col_idx, uint32_t elem_bits, in Default()
337 inline rc_t Write ( uint32_t col_idx, uint32_t elem_bits, in Write()
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H A Dvdb-priv.h312 uint32_t col_idx, bool *is_static );
/dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/libs/axf/
H A Dproject_read_from_sequence.c59 uint32_t col_idx; member
138 rc = VCursorAddColumn ( obj -> curs, & obj -> col_idx, "%.*s", in RestoreReadMake()
149 rc = VCursorDatatype ( obj -> curs, obj -> col_idx, NULL, & src ); in RestoreReadMake()
229 rc = VCursorCellDataDirect( self->curs, spot_id[ 0 ], self->col_idx, in project_from_sequence_impl()
/dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/libs/blast/
H A Drun-set.c123 int64_t row_id, uint32_t col_idx, uint32_t elemBits, in _VCursorCellDataDirect() argument
130 rc_t rc = VCursorCellDataDirect(self, row_id, col_idx, in _VCursorCellDataDirect()
136 "name=%s,spot=%lu", name, col_idx)); in _VCursorCellDataDirect()
144 name, col_idx, boff, elem_bits)); in _VCursorCellDataDirect()
151 "name=%s,spot=%lu,row_len=%u", name, col_idx, row_len)); in _VCursorCellDataDirect()
330 uint32_t *col_idx, const char *col_name, bool canBeMissed, const char *acc) in _VTableMakeCursorImpl() argument
360 rc = VCursorAddColumn(*curs, col_idx, "%s", col_name); in _VTableMakeCursorImpl()
373 uint32_t *col_idx, const char *col_name, const char *acc) in _VTableMakeCursor() argument
375 return _VTableMakeCursorImpl(self, curs, col_idx, col_name, false, acc); in _VTableMakeCursor()
3151 uint32_t col_idx = 0; in VdbBlastRunSetGetReadLength() local
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H A Drun-set.h273 uint32_t *col_idx, const char *col_name, const char *acc);
/dports/biology/ncbi-vdb/ncbi-vdb-2.11.0/libs/ngs/
H A DCSRA1_Alignment.c178 uint32_t col_idx in CSRA1_AlignmentGetCellData() argument
181 if ( self -> cell_data [ col_idx ] == NULL ) in CSRA1_AlignmentGetCellData()
183 assert ( self -> cell_len [ col_idx ] == 0 ); in CSRA1_AlignmentGetCellData()
194 col_idx, in CSRA1_AlignmentGetCellData()
196 & self -> cell_data [ col_idx ], in CSRA1_AlignmentGetCellData()
198 & self -> cell_len [ col_idx ] in CSRA1_AlignmentGetCellData()
203 self -> cell_data [ col_idx ] = NULL; in CSRA1_AlignmentGetCellData()
204 self -> cell_len [ col_idx ] = 0; in CSRA1_AlignmentGetCellData()
208 return self -> cell_data [ col_idx ]; in CSRA1_AlignmentGetCellData()
H A DCSRA1_Pileup.c301 int64_t row_id, uint32_t col_idx ) in CSRA1_Pileup_AlignCursorDataGetCell() argument
311 & self -> cell_data [ col_idx ], & boff, & self -> cell_len [ col_idx ] ); in CSRA1_Pileup_AlignCursorDataGetCell()
316 self -> blob [ col_idx ] = NULL; in CSRA1_Pileup_AlignCursorDataGetCell()
321 …VCursorGetBlobDirect ( self -> curs, & self -> blob [ col_idx ], row_id, self -> col_idx [ col_idx… in CSRA1_Pileup_AlignCursorDataGetCell()
327 & self -> cell_data [ col_idx ], & boff, & self -> cell_len [ col_idx ] ); in CSRA1_Pileup_AlignCursorDataGetCell()
335 int64_t row_id, uint32_t col_idx ) in CSRA1_Pileup_AlignCursorDataGetNonEmptyCell() argument
363 int64_t row_id, uint32_t col_idx ) in CSRA1_Pileup_AlignCursorDataGetInt32() argument
378 int64_t row_id, uint32_t col_idx ) in CSRA1_Pileup_AlignCursorDataGetUInt32() argument
1909 entry -> blob [ col_idx ] = cd -> blob [ col_idx ]; in CSRA1_PileupGetEntry()
1919 entry -> cell_len [ col_idx ] = cd -> cell_len [ col_idx ]; in CSRA1_PileupGetEntry()
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