| /dports/biology/ugene/ugene-40.1/src/corelibs/U2Algorithm/src/util_msaedit/color_schemes/ |
| H A D | MsaColorSchemeClustalX.cpp | 75 res += freqs[c]; in basesContent()
147 … if (freqs['P'] > content50 || basesContent(freqs, "WLVIMAFCYHP", 11) > content60) { in updateCache()
154 … } else if (freqs['T'] > content85 || freqs['S'] > content85 || freqs['G'] > 85) { in updateCache()
161 if ((freqs['K'] + freqs['R'] > content60) || freqs['Q'] > content85) { in updateCache()
167 … if ((freqs['T'] + freqs['S'] > content50) || basesContent(freqs, "WLVIMAFCYHP", 11) > content60) { in updateCache()
173 … if ((freqs['T'] + freqs['S'] > content50) || basesContent(freqs, "WLVIMAFCYHP", 11) > content80) { in updateCache()
179 if (freqs['N'] > content50 || freqs['D'] > content85) { in updateCache()
185 … if ((freqs['Q'] + freqs['E']) > content50 || (freqs['K'] + freqs['R']) > content60) { in updateCache()
194 …} else if (freqs['P'] > content50 || basesContent(freqs, "WLVIMAFCYHP", 11) > content60 || freqs['… in updateCache()
200 if ((freqs['D'] + freqs['E']) > content50 || freqs['N'] > content50) { in updateCache()
[all …]
|
| /dports/devel/py-ipyparallel/ipyparallel-6.3.0/examples/pi/ |
| H A D | pidigits.py | 50 return freqs
58 return freqs
75 return freqs
99 freqs = freqs/freqs.sum()
100 return freqs
111 freqs[index] += 1
115 freqs = freqs/freqs.sum()
116 return freqs
130 freqs[index] += 1
134 freqs = freqs/freqs.sum()
[all …]
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| /dports/audio/aubio/aubio-0.4.9/src/spectral/ |
| H A D | filterbank_mel.c | 58 if (freqs->data[fn] < 0) { in aubio_filterbank_set_triangle_bands()
64 } else if (fn > 0 && freqs->data[fn] < freqs->data[fn-1]) { in aubio_filterbank_set_triangle_bands()
68 } else if (fn > 0 && freqs->data[fn] == freqs->data[fn-1]) { in aubio_filterbank_set_triangle_bands()
186 fvec_t *freqs; in aubio_filterbank_set_mel_coeffs_slaney() local
211 del_fvec (freqs); in aubio_filterbank_set_mel_coeffs_slaney()
242 fvec_t *freqs; in aubio_filterbank_set_mel_coeffs() local
253 freqs = new_fvec(n_bands + 2); in aubio_filterbank_set_mel_coeffs()
264 del_fvec (freqs); in aubio_filterbank_set_mel_coeffs()
274 fvec_t *freqs; in aubio_filterbank_set_mel_coeffs_htk() local
285 freqs = new_fvec (n_bands + 2); in aubio_filterbank_set_mel_coeffs_htk()
[all …]
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| /dports/audio/py-aubio/aubio-0.4.9/src/spectral/ |
| H A D | filterbank_mel.c | 58 if (freqs->data[fn] < 0) { in aubio_filterbank_set_triangle_bands()
64 } else if (fn > 0 && freqs->data[fn] < freqs->data[fn-1]) { in aubio_filterbank_set_triangle_bands()
68 } else if (fn > 0 && freqs->data[fn] == freqs->data[fn-1]) { in aubio_filterbank_set_triangle_bands()
186 fvec_t *freqs; in aubio_filterbank_set_mel_coeffs_slaney() local
211 del_fvec (freqs); in aubio_filterbank_set_mel_coeffs_slaney()
242 fvec_t *freqs; in aubio_filterbank_set_mel_coeffs() local
253 freqs = new_fvec(n_bands + 2); in aubio_filterbank_set_mel_coeffs()
264 del_fvec (freqs); in aubio_filterbank_set_mel_coeffs()
274 fvec_t *freqs; in aubio_filterbank_set_mel_coeffs_htk() local
285 freqs = new_fvec (n_bands + 2); in aubio_filterbank_set_mel_coeffs_htk()
[all …]
|
| /dports/www/qt5-webengine/qtwebengine-everywhere-src-5.15.2/src/3rdparty/chromium/third_party/ffmpeg/libavcodec/ |
| H A D | scpr3.c | 116 m->freqs[b] -= m->freqs[b] >> 1; in rescale()
130 m->freqs[c + 1] = m->freqs[c]; in add_symbol()
213 freqs = n.freqs; in update_model6_to_7()
221 freqs[index] = m->freqs[2 * i]; in update_model6_to_7()
287 m->freqs[2 * b] = freqs[2 * e]; in rescale_dec()
406 m->freqs[2 * a] = m->freqs[2 * (a - 1)]; in incr_cntdec()
546 freqs = n.freqs[i]; in update_model1_to_5()
623 n.freqs[0] = n.freqs[2 * d]; in update_model2_to_6()
812 e += n.freqs[c] = m->freqs[c]; in update_model4_to_5()
820 e += n.freqs[g] = m->freqs[c]; in update_model4_to_5()
[all …]
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| /dports/www/chromium-legacy/chromium-88.0.4324.182/third_party/ffmpeg/libavcodec/ |
| H A D | scpr3.c | 116 m->freqs[b] -= m->freqs[b] >> 1; in rescale()
130 m->freqs[c + 1] = m->freqs[c]; in add_symbol()
213 freqs = n.freqs; in update_model6_to_7()
221 freqs[index] = m->freqs[2 * i]; in update_model6_to_7()
289 m->freqs[2 * b] = freqs[2 * e]; in rescale_dec()
408 m->freqs[2 * a] = m->freqs[2 * (a - 1)]; in incr_cntdec()
548 freqs = n.freqs[i]; in update_model1_to_5()
625 n.freqs[0] = n.freqs[2 * d]; in update_model2_to_6()
818 e += n.freqs[c] = m->freqs[c]; in update_model4_to_5()
826 e += n.freqs[g] = m->freqs[c]; in update_model4_to_5()
[all …]
|
| /dports/multimedia/handbrake/ffmpeg-4.4/libavcodec/ |
| H A D | scpr3.c | 116 m->freqs[b] -= m->freqs[b] >> 1; in rescale()
130 m->freqs[c + 1] = m->freqs[c]; in add_symbol()
213 freqs = n.freqs; in update_model6_to_7()
221 freqs[index] = m->freqs[2 * i]; in update_model6_to_7()
289 m->freqs[2 * b] = freqs[2 * e]; in rescale_dec()
408 m->freqs[2 * a] = m->freqs[2 * (a - 1)]; in incr_cntdec()
534 freqs = m->freqs[i]; in update_model1_to_5()
609 n.freqs[0] = n.freqs[2 * d]; in update_model2_to_6()
802 e += n.freqs[c] = m->freqs[c]; in update_model4_to_5()
810 e += n.freqs[g] = m->freqs[c]; in update_model4_to_5()
[all …]
|
| /dports/multimedia/ffmpeg/ffmpeg-4.4.1/libavcodec/ |
| H A D | scpr3.c | 116 m->freqs[b] -= m->freqs[b] >> 1; in rescale()
130 m->freqs[c + 1] = m->freqs[c]; in add_symbol()
213 freqs = n.freqs; in update_model6_to_7()
221 freqs[index] = m->freqs[2 * i]; in update_model6_to_7()
289 m->freqs[2 * b] = freqs[2 * e]; in rescale_dec()
408 m->freqs[2 * a] = m->freqs[2 * (a - 1)]; in incr_cntdec()
534 freqs = m->freqs[i]; in update_model1_to_5()
609 n.freqs[0] = n.freqs[2 * d]; in update_model2_to_6()
802 e += n.freqs[c] = m->freqs[c]; in update_model4_to_5()
810 e += n.freqs[g] = m->freqs[c]; in update_model4_to_5()
[all …]
|
| /dports/biology/haplohseq/haplohseq-0.1.2/src/test/ |
| H A D | FreqPhaseTest.cpp | 29 std::vector<double> freqs; in BOOST_AUTO_TEST_CASE() local
54 std::vector<double> freqs; in BOOST_AUTO_TEST_CASE() local
55 freqs += 1.0, 0.0, 0.5, 0.4, 0.6; in BOOST_AUTO_TEST_CASE()
74 std::vector<double> freqs; in BOOST_AUTO_TEST_CASE() local
75 freqs += 1.0, 0.0, 0.5, 0.4, 0.6; in BOOST_AUTO_TEST_CASE()
79 double mean = fp.meanValue(freqs); in BOOST_AUTO_TEST_CASE()
81 BOOST_REQUIRE_EQUAL(freqs[0], 1.0); in BOOST_AUTO_TEST_CASE()
86 std::vector<double> freqs; in BOOST_AUTO_TEST_CASE() local
87 freqs += 1.0, 0.0, 0.5, 0.4, 0.3; in BOOST_AUTO_TEST_CASE()
95 freqs.clear(); in BOOST_AUTO_TEST_CASE()
[all …]
|
| /dports/biology/vt/vt-0.57721/lib/htslib/cram/ |
| H A D | cram_stats.c | 56 st->freqs[val]++; in cram_stats_add()
81 st->freqs[val]--; in cram_stats_del()
104 if (!st->freqs[i]) in cram_stats_dump()
139 if (!st->freqs[i]) in cram_stats_encoding()
144 freqs = realloc(freqs, vals_alloc * sizeof(int)); in cram_stats_encoding()
147 if (freqs) free(freqs); in cram_stats_encoding()
152 freqs[nvals] = st->freqs[i]; in cram_stats_encoding()
153 ntot += freqs[nvals]; in cram_stats_encoding()
169 freqs = realloc(freqs, vals_alloc * sizeof(int)); in cram_stats_encoding()
176 ntot += freqs[nvals]; in cram_stats_encoding()
[all …]
|
| /dports/biology/bedtools/bedtools2-2.30.0/src/utils/htslib/cram/ |
| H A D | cram_stats.c | 56 st->freqs[val]++; in cram_stats_add()
81 st->freqs[val]--; in cram_stats_del()
104 if (!st->freqs[i]) in cram_stats_dump()
139 if (!st->freqs[i]) in cram_stats_encoding()
144 freqs = realloc(freqs, vals_alloc * sizeof(int)); in cram_stats_encoding()
147 if (freqs) free(freqs); in cram_stats_encoding()
152 freqs[nvals] = st->freqs[i]; in cram_stats_encoding()
153 ntot += freqs[nvals]; in cram_stats_encoding()
169 freqs = realloc(freqs, vals_alloc * sizeof(int)); in cram_stats_encoding()
176 ntot += freqs[nvals]; in cram_stats_encoding()
[all …]
|
| /dports/biology/stacks/stacks-2.4/htslib/cram/ |
| H A D | cram_stats.c | 56 st->freqs[val]++; in cram_stats_add()
81 st->freqs[val]--; in cram_stats_del()
104 if (!st->freqs[i]) in cram_stats_dump()
139 if (!st->freqs[i]) in cram_stats_encoding()
144 freqs = realloc(freqs, vals_alloc * sizeof(int)); in cram_stats_encoding()
147 if (freqs) free(freqs); in cram_stats_encoding()
152 freqs[nvals] = st->freqs[i]; in cram_stats_encoding()
153 ntot += freqs[nvals]; in cram_stats_encoding()
169 freqs = realloc(freqs, vals_alloc * sizeof(int)); in cram_stats_encoding()
170 if (!vals || !freqs) in cram_stats_encoding()
[all …]
|
| /dports/biology/kallisto/kallisto-0.46.1/ext/htslib/cram/ |
| H A D | cram_stats.c | 56 st->freqs[val]++; in cram_stats_add()
81 st->freqs[val]--; in cram_stats_del()
103 if (!st->freqs[i]) in cram_stats_dump()
135 if (!st->freqs[i]) in cram_stats_encoding()
140 freqs = realloc(freqs, vals_alloc * sizeof(int)); in cram_stats_encoding()
143 if (freqs) free(freqs); in cram_stats_encoding()
148 freqs[nvals] = st->freqs[i]; in cram_stats_encoding()
149 ntot += freqs[nvals]; in cram_stats_encoding()
165 freqs = realloc(freqs, vals_alloc * sizeof(int)); in cram_stats_encoding()
166 if (!vals || !freqs) in cram_stats_encoding()
[all …]
|
| /dports/biology/iolib/io_lib-io_lib-1-14-10/io_lib/ |
| H A D | cram_stats.c | 64 st->freqs[val]++; in cram_stats_add()
86 st->freqs[val]--; in cram_stats_del()
108 if (!st->freqs[i]) in cram_stats_dump()
141 if (!st->freqs[i]) in cram_stats_encoding()
146 freqs = realloc(freqs, vals_alloc * sizeof(int)); in cram_stats_encoding()
149 if (freqs) free(freqs); in cram_stats_encoding()
154 freqs[nvals] = st->freqs[i]; in cram_stats_encoding()
155 ntot += freqs[nvals]; in cram_stats_encoding()
169 freqs = realloc(freqs, vals_alloc * sizeof(int)); in cram_stats_encoding()
170 if (!vals || !freqs) in cram_stats_encoding()
[all …]
|
| /dports/devel/android-tools-fastboot/platform_system_core-platform-tools-29.0.5/extras/cpustats/ |
| H A D | cpustats.c | 46 struct freq_info *freqs; member
161 free(new_cpus[i].freqs); in main()
279 new_cpus[cpu].freqs[i].freq = old_cpus[cpu].freqs[i].freq; in read_freq_stats()
280 new_cpus[cpu].freqs[i].time = old_cpus[cpu].freqs[i].time; in read_freq_stats()
283 new_total_cpu.freqs[i].freq = new_cpus[cpu].freqs[i].freq; in read_freq_stats()
284 new_total_cpu.freqs[i].time += new_cpus[cpu].freqs[i].time; in read_freq_stats()
365 delta_time = new_cpu->freqs[i].time - old_cpu->freqs[i].time; in print_freq_stats()
378 new_cpu->freqs[i].time - old_cpu->freqs[i].time); in print_freq_stats()
396 if (new_cpus[i].freqs[j].time - old_cpus[i].freqs[j].time != in should_print_freq_stats()
397 new_cpus[0].freqs[j].time - old_cpus[0].freqs[j].time) { in should_print_freq_stats()
[all …]
|
| /dports/math/py-numpy/numpy-1.20.3/numpy/fft/tests/ |
| H A D | test_helper.py | 29 freqs = [[0, 1, 2], [3, 4, -4], [-3, -2, -1]]
31 assert_array_almost_equal(fft.fftshift(freqs, axes=(0, 1)), shifted)
32 assert_array_almost_equal(fft.fftshift(freqs, axes=0),
33 fft.fftshift(freqs, axes=(0,)))
38 assert_array_almost_equal(fft.fftshift(freqs), shifted)
39 assert_array_almost_equal(fft.ifftshift(shifted), freqs)
43 freqs = [
55 assert_array_almost_equal(fft.fftshift(freqs, axes=0), shift_dim0)
66 assert_array_almost_equal(fft.fftshift(freqs, axes=1), shift_dim1)
83 assert_array_almost_equal(fft.fftshift(freqs), shift_dim_both)
[all …]
|
| /dports/biology/ugene/ugene-40.1/src/corelibs/U2Algorithm/src/util_msa_consensus/ |
| H A D | MSAConsensusUtils.cpp | 76 freqs[idx].first++; in getConsensusPercentTip()
77 freqs[idx].second = c; in getConsensusPercentTip()
88 std::sort(freqs.begin(), freqs.end()); in getConsensusPercentTip()
94 int p = freqs[freqs.size() - i - 1].first; in getConsensusPercentTip()
102 int c = freqs[freqs.size() - i - 1].second; in getConsensusPercentTip()
147 freqs[c]++; in getColumnFreqs()
149 maxCFreq = freqs[c]; in getColumnFreqs()
167 freqs[idx].first++; in packConsensusCharsToInt()
172 std::sort(freqs.begin(), freqs.end()); in packConsensusCharsToInt()
179 int p = int(freqs[freqs.size() - i - 1].first * percentK); in packConsensusCharsToInt()
[all …]
|
| H A D | MSAConsensusAlgorithmDefault.cpp | 57 QVector<QPair<int, char>> freqs(32); in getConsensusCharAndScore() local
65 assert(idx >= 0 && idx <= freqs.size()); in getConsensusCharAndScore()
66 freqs[idx].first++; in getConsensusCharAndScore()
67 freqs[idx].second = c; in getConsensusCharAndScore()
70 std::sort(freqs.begin(), freqs.end()); in getConsensusCharAndScore()
71 int p1 = freqs[freqs.size() - 1].first; in getConsensusCharAndScore()
72 int p2 = freqs[freqs.size() - 2].first; in getConsensusCharAndScore()
77 int c1 = freqs[freqs.size() - 1].second; in getConsensusCharAndScore()
|
| /dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/cram/ |
| H A D | cram_stats.c | 58 st->freqs[val]++; in cram_stats_add()
86 st->freqs[val]--; in cram_stats_del()
87 assert(st->freqs[val] >= 0); in cram_stats_del()
109 if (!st->freqs[i]) in cram_stats_dump()
144 if (!st->freqs[i]) in cram_stats_encoding()
156 freqs = freqs_tmp; in cram_stats_encoding()
159 freqs[nvals] = st->freqs[i]; in cram_stats_encoding()
160 ntot += freqs[nvals]; in cram_stats_encoding()
183 freqs = freqs_tmp; in cram_stats_encoding()
188 ntot += freqs[nvals]; in cram_stats_encoding()
[all …]
|
| /dports/biology/py-pysam/pysam-0.18.0/htslib/cram/ |
| H A D | cram_stats.c | 58 st->freqs[val]++; in cram_stats_add()
86 st->freqs[val]--; in cram_stats_del()
87 assert(st->freqs[val] >= 0); in cram_stats_del()
109 if (!st->freqs[i]) in cram_stats_dump()
144 if (!st->freqs[i]) in cram_stats_encoding()
156 freqs = freqs_tmp; in cram_stats_encoding()
159 freqs[nvals] = st->freqs[i]; in cram_stats_encoding()
160 ntot += freqs[nvals]; in cram_stats_encoding()
183 freqs = freqs_tmp; in cram_stats_encoding()
188 ntot += freqs[nvals]; in cram_stats_encoding()
[all …]
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| /dports/biology/htslib/htslib-1.14/cram/ |
| H A D | cram_stats.c | 58 st->freqs[val]++; in cram_stats_add()
86 st->freqs[val]--; in cram_stats_del()
87 assert(st->freqs[val] >= 0); in cram_stats_del()
109 if (!st->freqs[i]) in cram_stats_dump()
144 if (!st->freqs[i]) in cram_stats_encoding()
156 freqs = freqs_tmp; in cram_stats_encoding()
159 freqs[nvals] = st->freqs[i]; in cram_stats_encoding()
160 ntot += freqs[nvals]; in cram_stats_encoding()
183 freqs = freqs_tmp; in cram_stats_encoding()
188 ntot += freqs[nvals]; in cram_stats_encoding()
[all …]
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| /dports/science/qiskit-aer/qiskit-aer-0.5.2/test/terra/openpulse/ |
| H A D | test_system_models.py | 119 freqs = test_model.calculate_channel_frequencies()
122 self.assertAlmostEqual(freqs['U0'], default_u_lo_freq[0])
127 freqs = test_model.calculate_channel_frequencies()
139 self.assertAlmostEqual(freqs['D0'], 4.999009804864)
140 self.assertAlmostEqual(freqs['D1'], 5.100990195135)
141 self.assertAlmostEqual(freqs['U0'], 4.999009804864)
142 self.assertAlmostEqual(freqs['U1'], 0.101980390271)
148 self.assertAlmostEqual(freqs['D0'], 5.101980390271)
149 self.assertAlmostEqual(freqs['D1'], 4.898019609728)
150 self.assertAlmostEqual(freqs['U0'], 5.101980390271)
[all …]
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| /dports/x11-toolkits/qt5-virtualkeyboard/kde-qtvirtualkeyboard-5.15.2p4/src/plugins/pinyin/3rdparty/pinyin/share/ |
| H A D | ngram.cpp | 251 if (NULL == freqs) in build_unigram()
254 freqs[0] = ADD_COUNT; in build_unigram()
255 total_freq += freqs[0]; in build_unigram()
265 if (freqs[idx_now] <= 0) in build_unigram()
266 freqs[idx_now] = 0.3; in build_unigram()
268 total_freq += freqs[idx_now]; in build_unigram()
276 freqs[pos] = freqs[pos] / total_freq; in build_unigram()
277 assert(freqs[pos] > 0); in build_unigram()
278 if (freqs[pos] > max_freq) in build_unigram()
279 max_freq = freqs[pos]; in build_unigram()
[all …]
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| /dports/net/hostapd-devel/hostap-14ab4a816/wpa_supplicant/ |
| H A D | bgscan_learn.c | 224 return freqs; in bgscan_learn_get_freqs()
225 freqs = n; in bgscan_learn_get_freqs()
231 return freqs; in bgscan_learn_get_freqs()
241 return freqs; in bgscan_learn_get_probe_freq()
254 freqs = n; in bgscan_learn_get_probe_freq()
266 return freqs; in bgscan_learn_get_probe_freq()
289 freqs = bgscan_learn_get_probe_freq(data, freqs, count); in bgscan_learn_timeout()
293 for (i = 0; freqs && freqs[i]; i++) { in bgscan_learn_timeout()
304 params.freqs = freqs; in bgscan_learn_timeout()
369 freqs = n; in bgscan_learn_get_supp_freqs()
[all …]
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| /dports/security/wpa_supplicant/wpa_supplicant-2.9/wpa_supplicant/ |
| H A D | bgscan_learn.c | 224 return freqs; in bgscan_learn_get_freqs()
225 freqs = n; in bgscan_learn_get_freqs()
231 return freqs; in bgscan_learn_get_freqs()
241 return freqs; in bgscan_learn_get_probe_freq()
254 freqs = n; in bgscan_learn_get_probe_freq()
266 return freqs; in bgscan_learn_get_probe_freq()
289 freqs = bgscan_learn_get_probe_freq(data, freqs, count); in bgscan_learn_timeout()
293 for (i = 0; freqs && freqs[i]; i++) { in bgscan_learn_timeout()
304 params.freqs = freqs; in bgscan_learn_timeout()
369 freqs = n; in bgscan_learn_get_supp_freqs()
[all …]
|