Searched refs:intron_coverage (Results 1 – 1 of 1) sorted by relevance
5480 map<int,double> intron_coverage; // in transcript space in ClipLowCoverageUTR() local5507 … intron_coverage[intron] += (align.Type() == CGeneModel::eSR) ? align.Weight() : 0; in ClipLowCoverageUTR()5549 core_inron_coverage += intron_coverage[intron]; in ClipLowCoverageUTR()5570 …(intron_coverage.find(left_limit-1) == intron_coverage.end() || intron_coverage[left_limit-1] > co… in ClipLowCoverageUTR()5604 …(intron_coverage.find(right_limit) == intron_coverage.end() || intron_coverage[right_limit] > core… in ClipLowCoverageUTR()5757 map<TSignedSeqRange,double> intron_coverage; in SetConsistentCoverage() local5777 … intron_coverage[intron] += (align.Type() == CGeneModel::eSR) ? align.Weight() : 0; in SetConsistentCoverage()5784 …for(map<TSignedSeqRange,double>::iterator it = intron_coverage.begin(); it != intron_coverage.end(… in SetConsistentCoverage()5813 if(intron_coverage.size() > 1) in SetConsistentCoverage()