Searched refs:mrnaCDS (Results 1 – 1 of 1) sorted by relevance
144 map<string,TSignedSeqRange> mrnaCDS; member in CChainer::CChainerImpl6597 : mininframefrac(_mininframefrac), seq(_seq), scope(_scope), mrnaCDS(_mrnaCDS) {} in ProjectCDS()6602 const map<string, TSignedSeqRange>& mrnaCDS; member6631 map<string,TSignedSeqRange>::const_iterator pos = mrnaCDS.find(accession); in transform_align()6632 if(pos != mrnaCDS.end()) { in transform_align()6921 … m_data->mrnaCDS.find("use_objmgr")!=m_data->mrnaCDS.end() ? &scope : NULL, in ProjectCDS()6922 m_data->mrnaCDS); in ProjectCDS()7252 return m_data->mrnaCDS; in SetMrnaCDS()7304 map<string,TSignedSeqRange>& mrnaCDS = chainer->SetMrnaCDS(); in ArgsToChainer() local7307 mrnaCDS[args["mrnaCDS"].AsString()] = TSignedSeqRange(); in ArgsToChainer()[all …]