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Searched refs:rLog (Results 1 – 25 of 47) sorted by path

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/dports/audio/zynaddsubfx/zynaddsubfx-3.0.6-rc5/rtosc/example/complex/
H A Dsynth.cpp26 rParamF(at, rLog(1e-3,10), "attach time"),
27 rParamF(dt, rLog(1e-3,10), "decay time"),
28 rParamF(rt, rLog(1e-3,10), "release time"),
91 rParamF(freq, rLog(1,1e3), "note frequency"),
/dports/audio/zynaddsubfx/zynaddsubfx-3.0.6-rc5/rtosc/include/rtosc/
H A Dport-sugar.h338 #define rLog(min_, max_) rMap(min, min_) rMap(max, max_) rMap(scale, logarithmic) macro
/dports/audio/zynaddsubfx/zynaddsubfx-3.0.6-rc5/src/Misc/
H A DMicrotonal.cpp54 rLog(1.0,20000.0), in lock()
/dports/audio/zynaddsubfx/zynaddsubfx-3.0.6-rc5/src/Params/
H A DEnvelopeParams.cpp120 rParamF(A_dt, rShort("a.dt"), rLog(0.0f,41.0f), rDefaultDepends(loc),
135 rParamF(D_dt, rShort("d.dt"), rLog(0.0f,41.0f), rDefaultDepends(loc),
149 rParamF(R_dt, rShort("r.dt"), rLog(0.009f,41.0f), rDefaultDepends(loc),
H A DFilterParams.cpp79 rParamF(baseq, rShort("q"), rUnit(none), rLog(0.1, 1000),
87 rUnit(Hz), rLog(31.25, 32000),
H A DLFOParams.cpp41 rParamF(freq, rShort("freq"), rUnit(HZ), rLog(0.0775679,85.25),
115 {"delay::f", rProp(parameter) rMap(units, ms) rLog(0,4000), 0,
119 #define rPseudoLog(a,b) rLog(a,b)
/dports/biology/clustal-omega/clustal-omega-1.2.4/src/
H A Dclustal-omega.c563 Log(&rLog, LOG_INFO, in AlnToHMM()
773 Log(&rLog, LOG_VERBOSE, in AlignmentOrder()
830 Log(&rLog, LOG_INFO, in AlignmentOrder()
870 Log(&rLog, LOG_VERBOSE, in AlignmentOrder()
920 Log(&rLog, LOG_INFO, in SetAutoOptions()
1153 Log(&rLog, LOG_INFO, in Align()
1181 Log(&rLog, LOG_INFO, in Align()
1236 Log(&rLog, LOG_VERBOSE, in Align()
1254 Log(&rLog, LOG_VERBOSE, in Align()
1376 Log(&rLog, LOG_VERBOSE, in Align()
[all …]
H A Dclustalo-api-test.c51 LogDefaultSetup(&rLog); in main()
60 Log(&rLog, LOG_FATAL, "Need sequence file as argument"); in main()
70 Log(&rLog, LOG_FATAL, "Reading sequence file '%s' failed", pcSeqInfile); in main()
76 Log(&rLog, LOG_INFO, in main()
79 Log(&rLog, LOG_INFO, in main()
89 Log(&rLog, LOG_FATAL, "A fatal error happended during the alignment process"); in main()
97 Log(&rLog, LOG_FATAL, "Could not save alignment"); in main()
102 Log(&rLog, LOG_INFO, "Successfull program exit"); in main()
H A Dmymain.c284 Log(&rLog, LOG_FATAL, "%s %s", in UserOptsLogicCheck()
638 rLog.iLogLevelEnabled = LOG_WARN; in ParseCommandLine()
640 rLog.iLogLevelEnabled = LOG_INFO; in ParseCommandLine()
642 rLog.iLogLevelEnabled = LOG_VERBOSE; in ParseCommandLine()
644 rLog.iLogLevelEnabled = LOG_DEBUG; in ParseCommandLine()
679 Log(&rLog, LOG_FATAL, "%s '%s'. %s", in ParseCommandLine()
830 Log(&rLog, LOG_FATAL, "%s '%s'. %s", in ParseCommandLine()
1039 LogDefaultSetup(&rLog); in MyMain()
1050 LogSetFP(&rLog, LOG_INFO, prLogFile); in MyMain()
1052 LogSetFP(&rLog, LOG_DEBUG, prLogFile); in MyMain()
[all …]
/dports/biology/clustal-omega/clustal-omega-1.2.4/src/clustal/
H A Dhhalign_wrapper.c211 Log(&rLog, LOG_DEBUG, in TranslateUnknown2Ambiguity()
665 NewProgress(&prProgress, LogGetFP(&rLog, LOG_INFO), in PileUp()
962 Log(&rLog, LOG_FORCED_DEBUG, "iNodeCount = %d", iNodeCount); in HHalignWrapper()
976 NewProgress(&prProgress, LogGetFP(&rLog, LOG_INFO), in HHalignWrapper()
1043 Log(&rLog, LOG_DEBUG, in HHalignWrapper()
1081 if (rLog.iLogLevelEnabled <= LOG_DEBUG){ in HHalignWrapper()
1083 FILE *fp = LogGetFP(&rLog, LOG_DEBUG); in HHalignWrapper()
1507 if (rLog.iLogLevelEnabled <= LOG_DEBUG){ in HHalignWrapper()
1562 if (rLog.iLogLevelEnabled <= LOG_DEBUG){ in HHalignWrapper()
1564 FILE *fp = LogGetFP(&rLog, LOG_DEBUG); in HHalignWrapper()
[all …]
H A Dktuple_pair.c141 Log(&rLog, LOG_WARN, "Unknown character in seq '%s'", &(seq[1])); in encode()
309 … Log(&rLog, LOG_FORCED_DEBUG, "b4 sort array1[%d]=%d array2[%d]=%d", i, array1[i], i, array2[i]); in des_quick_sort()
372 …Log(&rLog, LOG_FORCED_DEBUG, "after sort array1[%d]=%d array2[%d]=%d", i, array1[i], i, array2[i]); in des_quick_sort()
457 …Log(&rLog, LOG_FORCED_DEBUG, "b4 sort disp[%d]=%d diag_index[%d]=%d", i, diag_index[i], i, displ[i… in pair_align()
465 …Log(&rLog, LOG_FORCED_DEBUG, "after sort disp[%d]=%d diag_index[%d]=%d", i, diag_index[i], i, disp… in pair_align()
541 Log(&rLog, LOG_VERBOSE, "(Partial alignment)"); in pair_align()
651 bool bPrintCR = (rLog.iLogLevelEnabled<=LOG_VERBOSE) ? FALSE : TRUE; in KTuplePairDist()
655 NewProgress(&prProgress, LogGetFP(&rLog, LOG_INFO), in KTuplePairDist()
681 Log(&rLog, LOG_FATAL, "Internal error in %s: Unknown sequence type.", __FUNCTION__); in KTuplePairDist()
804 Log(&rLog, LOG_DEBUG, "K-tuple distance for sequence pair %d:%d = %lg", in KTuplePairDist()
H A Dlog.c34 log_t rLog; variable
H A Dlog.h58 extern log_t rLog;
H A Dmbed.c491 Log(&rLog, LOG_INFO, in SeedSelection()
509 Log(&rLog, LOG_INFO, in SeedSelection()
628 if (LOG_DEBUG <= rLog.iLogLevelEnabled) { in SeedSelection()
1109 Log(&rLog, LOG_DEBUG, in BisectingKmeans()
1206 Log(&rLog, LOG_DEBUG, in Mbed()
1259 Log(&rLog, LOG_INFO, in Mbed()
1412 Log(&rLog, LOG_DEBUG, in Mbed()
1478 iOldLogLevel = rLog.iLogLevelEnabled; in Mbed()
1479 rLog.iLogLevelEnabled = LOG_WARN; in Mbed()
1488 rLog.iLogLevelEnabled = iOldLogLevel; in Mbed()
[all …]
H A Dmuscle_tree.c1119 Log(&rLog, LOG_FATAL, "Tree::Unroot, not rooted"); in UnrootFromFile()
1167 Log(&rLog, LOG_FORCED_DEBUG, "Group is leaf '%s'", szToken); in GetGroupFromFile()
1192 Log(&rLog, LOG_FORCED_DEBUG, "%s", "Expect comma"); in GetGroupFromFile()
1201 Log(&rLog, LOG_FORCED_DEBUG, "%s", "Expect right sub-group"); in GetGroupFromFile()
1224 Log(&rLog, LOG_FATAL, "%s" "ungetc failed"); in GetGroupFromFile()
1239 Log(&rLog, LOG_FATAL, "%s", "fgetc reached end of file"); in GetGroupFromFile()
1251 Log(&rLog, LOG_FATAL, "%s" "ungetc failed"); in GetGroupFromFile()
1296 Log(&rLog, LOG_FATAL, "%s" "ungetc failed"); in FileSkipWhiteX()
1321 Log(&rLog, LOG_FATAL, "%s", "fgetc reached end of file"); in GetToken()
1347 Log(&rLog, LOG_FATAL, "%s", "fgetc reached end of file"); in GetToken()
[all …]
H A Dmuscle_upgma.c157 Log(&rLog, LOG_FATAL, "TriangleSubscript(%u,%u) %u", uIndex1, uIndex2, g_uLeafCount); in TriangleSubscript()
402 Log(&rLog, LOG_FATAL, "UPGMA2: Invalid LINKAGE_%u", linkage); in MuscleUpgma2()
466 …Log(&rLog, LOG_FORCED_DEBUG, "uRoot=%d g_uLeafCount=%d g_uInternalNodeCount=%d", uRoot, g_uLeafCou… in MuscleUpgma2()
468 …Log(&rLog, LOG_FORCED_DEBUG, "internal node=%d: g_uLeft=%d g_uRight=%d g_LeftLength=%f g_RightLen… in MuscleUpgma2()
474 Log(&rLog, LOG_FORCED_DEBUG, "leaf node=%d: Ids=%d names=%s", in MuscleUpgma2()
H A Dpair_dist.c140 Log(&rLog, LOG_FATAL, "Internal error in %s:%s", __FILE__, __FUNCTION__); in KimuraCorrection()
180 bool bPrintCR = (rLog.iLogLevelEnabled<=LOG_VERBOSE) ? FALSE : TRUE; in SquidIdPairDist()
195 NewProgress(&prProgress, LogGetFP(&rLog, LOG_INFO), in SquidIdPairDist()
289 bool bPrintCR = (rLog.iLogLevelEnabled<=LOG_VERBOSE) ? FALSE : TRUE; in PairDistances()
304 Log(&rLog, LOG_WARN, in PairDistances()
307 Log(&rLog, LOG_FATAL, "%s", "Reading distance matrix failed"); in PairDistances()
344 Log(&rLog, LOG_INFO, "Calculating pairwise ktuple-distances..."); in PairDistances()
346 NewProgress(&prProgress, LogGetFP(&rLog, LOG_INFO), in PairDistances()
369 NewProgress(&prProgress, LogGetFP(&rLog, LOG_INFO), in PairDistances()
386 NewProgress(&prProgress, LogGetFP(&rLog, LOG_INFO), in PairDistances()
[all …]
H A Dprogress.c122 if (rLog.iLogLevelEnabled>LOGLEVEL_THRESHOLD) { in ProgressLog()
165 if (rLog.iLogLevelEnabled>LOGLEVEL_THRESHOLD) { in ProgressDone()
H A Dseq.c80 Log(&rLog, LOG_WARN, in AliStat()
85 Log(&rLog, LOG_WARN, in AliStat()
335 Log(&rLog, LOG_FORCED_DEBUG, "sqinfo->id = %s", sqinfo->id); in LogSqInfo()
478 Log(&rLog, LOG_ERROR, "Sequence '%s' has 0 residues", in ReadSequences()
617 Log(&rLog, LOG_INFO, "Read %d sequences (type: %s) from %s", in ReadSequences()
682 Log(&rLog, LOG_WARN, in ReadSequences()
896 Log(&rLog, LOG_ERROR, "Unknown output format chosen"); in WriteAlignment()
1000 Log(&rLog, LOG_FATAL, "internal error: %s", in WriteAlignment()
1006 Log(&rLog, LOG_INFO, in WriteAlignment()
1066 Log(&rLog, LOG_WARN, in SortMSeqByLength()
[all …]
H A Dsymmatrix.c447 Log(&rLog, LOG_FORCED_DEBUG, "iTotalNSeq parsed from %s is %d\n", pcFileIn, iTotalNSeq); in SymMatrixRead()
471 Log(&rLog, LOG_FORCED_DEBUG, "Got line: %s\n", buf); in SymMatrixRead()
519 …Log(&rLog, LOG_FORCED_DEBUG, "Parsed distance %d for seq %d = %f\n", iNParsedDists-1, iNParsedSeq-… in SymMatrixRead()
537 Log(&rLog, LOG_FORCED_DEBUG, "prSymMat_p[%d][%d]=%f\n", i, j, (*prSymMat_p)[i][j]); in SymMatrixRead()
H A Dtree.c62 Log(&rLog, LOG_ERROR, "Couldn't open tree-file '%s' for writing. Skipping", ftree); in GuideTreeUpgma()
70 if (rLog.iLogLevelEnabled <= LOG_DEBUG) { in GuideTreeUpgma()
71 Log(&rLog, LOG_DEBUG, "tree logging..."); in GuideTreeUpgma()
72 LogTree((*tree), LogGetFP(&rLog, LOG_DEBUG)); in GuideTreeUpgma()
77 Log(&rLog, LOG_INFO, "Guide tree written to %s", ftree); in GuideTreeUpgma()
106 Log(&rLog, LOG_ERROR, "%s", "MuscleTreeFromFile failed"); in GuideTreeFromFile()
112 Log(&rLog, LOG_ERROR, "User tree must be rooted"); in GuideTreeFromFile()
117 Log(&rLog, LOG_ERROR, "User tree does not match input sequences"); in GuideTreeFromFile()
139 if (rLog.iLogLevelEnabled <= LOG_DEBUG) { in GuideTreeFromFile()
140 Log(&rLog, LOG_DEBUG, "tree logging..."); in GuideTreeFromFile()
[all …]
H A Dutil.c84 Log(&rLog, LOG_FATAL, "Out of memory (requested from %s:%d)\n", function, line); in CkMalloc()
119 Log(&rLog, LOG_FATAL, "Out of memory (requested from %s:%d)\n", in CkCalloc()
153 Log(&rLog, LOG_FATAL, "FATAL: Out of memory (requested from %s:%d)\n", in CkRealloc()
183 Log(&rLog, LOG_WARN, "Bad call to CkFree from %s:%d (pointer was NULL)\n", function, line); in CkFree()
433 Log(&rLog, LOG_FATAL, "Internal error: unknown order %c", cOrder); in QSortAndTrackIndex()
483 Log(&rLog, LOG_ERROR, "Couldn't close temporily created file %s. Expect trouble..."); in FileIsWritable()
498 … Log(&rLog, LOG_ERROR, "Removing of temporarily created file %s failed. Expect trouble..."); in FileIsWritable()
H A Dweights.c150 Log(&rLog, LOG_FATAL, "Normalise, sum=0"); in Normalise()
197 if (rLog.iLogLevelEnabled <= LOG_DEBUG) { in CalcClustalWeights()
219 Log(&rLog, LOG_ERROR, "Tree must be rooted to get weights"); in CalcClustalWeights()
226 Log(&rLog, LOG_FORCED_DEBUG, "%s", "Weights follow"); in CalcClustalWeights()
237 Log(&rLog, LOG_FATAL, "Internal error, root count %u %u", in CalcClustalWeights()
242 … Log(&rLog, LOG_FORCED_DEBUG, "LeavesUnderNode[%d]=%d", uNodeIndex, puLeavesUnderNode[uNodeIndex]); in CalcClustalWeights()
291 Log(&rLog, LOG_FATAL, in CalcClustalWeights()
324 …Log(&rLog, LOG_FORCED_DEBUG, "Weights before normalisation: pdWeights_p[%d]=%f", i, (*pdWeights_p)… in CalcClustalWeights()
/dports/biology/clustal-omega/clustal-omega-1.2.4/src/hhalign/
H A Dhhfullalignment-C.h200 if (rLog.iLogLevelEnabled <= LOG_DEBUG){ in Build()
215 if (rLog.iLogLevelEnabled <= LOG_DEBUG){ in Build()
216 FILE *fp = rLog.prFP[LOG_DEBUG]; in Build()
263 if (rLog.iLogLevelEnabled <= LOG_DEBUG){ in Build()
266 FILE *fp = rLog.prFP[LOG_DEBUG]; in Build()
281 if (rLog.iLogLevelEnabled <= LOG_DEBUG){ in Build()
/dports/devel/rlog/rlog-1.4/docs/
H A Dchannel.dox16 rLog(myChannel, "hi");
25 rLog(myChannel, "hi");
44 Channels are componentized. By default, all log messages using one of the rLog

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