/dports/audio/rkr-lv2/rkrlv2-beta_2-2-gd8c17d3/src/ |
H A D | rakarrack.cxx | 7538 seq_1->value(rkr->efx_Sequence->getpar(0)); 18660 seq_1->type(5); 18661 seq_1->box(FL_FLAT_BOX); 18662 seq_1->color((Fl_Color)178); 18664 seq_1->labeltype(FL_NORMAL_LABEL); 18665 seq_1->labelfont(0); 18666 seq_1->labelsize(10); 18668 seq_1->maximum(127); 18669 seq_1->step(1); 18673 seq_1->when(FL_WHEN_CHANGED); [all …]
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H A D | rakarrack.fl | 8123 seq_1->value(rkr->efx_Sequence->getpar(0)); 8187 Fl_Value_Slider seq_1 { 16154 seq_1->value(rkr->efx_Sequence->getpar(0)); 16155 seq_1->redraw();
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H A D | rakarrack.h | 2684 SliderW *seq_1;
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/dports/biology/flash/FLASH-1.2.11/ |
H A D | combine_reads.c | 107 if (seq_1[i] == 'N' || seq_2[i] == 'N') { in compute_mismatch_stats() 110 if (seq_1[i] != seq_2[i]) { in compute_mismatch_stats() 195 seq_1 += 16, seq_2 += 16; in compute_mismatch_stats() 212 const char *_seq_1 = seq_1 - veclen; in compute_mismatch_stats() 232 if (seq_1[i] != seq_2[i]) { in compute_mismatch_stats() 361 *combined_seq++ = *seq_1++; in generate_combined_read() 367 if (*seq_1 == *seq_2) { in generate_combined_read() 370 *combined_seq = *seq_1; in generate_combined_read() 401 *combined_seq = *seq_1; in generate_combined_read() 410 *combined_seq = *seq_1; in generate_combined_read() [all …]
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/blast/dbindex_search/ |
H A D | sr_search.hpp | 56 const CSeqVector * seq_1; member 69 : seq_1( &seq ), seq_2( 0 ), num_res( nr ), in SSearchData() 81 : seq_1( &seq1 ), seq_2( &seq2 ), in SSearchData()
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/dbindex_search/ |
H A D | sr_search_impl.hpp | 336 const CSeqVector & seq1 = *sdata.seq_1; in search() 646 const CSeqVector & seq = *sdata.seq_1; in search()
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/asnval/TestRes.asnval/tests/test1/test-cases/ |
H A D | reject-sqn.golden | 1 ERROR: valid [SEQ_INST.MolNuclAcid] Bioseq.mol is type na BIOSEQ: lcl|seq_1: raw, na len= 336 2 … /environmental_sample DESCRIPTOR: BioSrc: Uncultured bacterium BIOSEQ: lcl|seq_1: raw, na len= 336 3 ERROR: valid [SEQ_DESCR.NoMolInfoFound] No Mol-info applies to this Bioseq BIOSEQ: lcl|seq_1: raw, … 7 …enetic code [1] or protein should be partial FEATURE: CDS: [lcl|seq_1:1-336] [lcl|seq_1: raw, na … 8 ERROR: valid [SEQ_FEAT.NoStop] Missing stop codon FEATURE: CDS: [lcl|seq_1:1-336] [lcl|seq_1: raw,… 9 … between CDS (code 1) and BioSource (code 0) FEATURE: CDS: [lcl|seq_1:1-336] [lcl|seq_1: raw, na … 10 …not packaged in nuc-prot set with nucleotide FEATURE: CDS: [lcl|seq_1:1-336] [lcl|seq_1: raw, na … 345 …on citation has no affiliation DESCRIPTOR: Pub: Bollin,C.J. (11-8-2012) BIOSEQ-SET: pop-set: seq_1
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H A D | reject.sqn | 94 subname "seq_1" } } } } } } , 99 str "seq_1" } , 109 str ">seq_1" } } } } , 169 str "seq_1" } } } } } } , 3493 str "seq_1" ,
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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/cleanup/test/test_cases/ReassignIds/ |
H A D | example2.asn | 958 local str "6.seq_1", 961 tag str "q22.sqn/6.seq_1" 998 id local str "6.seq_1" 1597 product whole local str "6.seq_1",
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H A D | example2.ref | 958 local str "6.seq_1", 961 tag str "q22.sqn/6.seq_1" 998 id local str "6.seq_1" 1597 product whole local str "6.seq_1",
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/dports/biology/ncbi-toolkit/ncbi/network/wwwblast/Src/ |
H A D | wblast2.c | 1611 …rx, Int2 ma, Int2 ms, BLAST_OptionsBlkPtr options, CharPtr seq_2, CharPtr seq_1, CharPtr one, Char… in PrintParam() argument 1690 if (seq_1 != NULL && *seq_1 != NULLB) { in PrintParam() 1692 for (s = seq_1; *s != '\0'; s++) { in PrintParam() 2082 CharPtr seq_1=NULL, seq_2=NULL, chptr; in Main() local 2359 seq_1 = seq1EntryData; in Main() 2378 if (seq_1 != NULL) { in Main() 2379 query_sep = FastaToSeqBuff(seq_1, &sq_1, !is_aa1); in Main() 2381 is_na1 = FastaCheckDna(seq_1); in Main()
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/dports/biology/p5-TrimGalore/TrimGalore-0.6.5/ |
H A D | trim_galore | 1679 my $seq_1 = <IN1>; 1688 if ($id_1 and $seq_1 and $l3_1 and $qual_1 and $id_2 and $seq_2 and $l3_2 and $qual_2){ 1698 last unless ($id_1 and $seq_1 and $l3_1 and $qual_1); 1713 chomp $seq_1; 1720 …$seq_1 = substr($seq_1,$clip_r1); # starting after the sequences to be trimmed until the end of th… 1733 …$seq_1 = substr($seq_1,0,(length($seq_1) - $three_prime_clip_r1)); # starting after the sequences … 1747 my $n_count = Ncounter($seq_1); 1766 if ( (length($seq_1) < $length_cutoff) or (length($seq_2) < $length_cutoff) ){ 1770 if ( length($seq_1) >= $length_read_1){ # read 1 is long enough 1772 print UNPAIRED1 "$seq_1\n"; [all …]
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/dports/biology/seqan-apps/seqan-seqan-v2.4.0/demos/tutorial/journaled_set/ |
H A D | sequences.fasta | 17 >seq_1
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/dports/biology/seqan-apps/seqan-seqan-v2.4.0/manual/source/Tutorial/InputOutput/ |
H A D | sequences.fasta | 17 >seq_1
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/dports/biology/seqan1/seqan-1.3.1/demos/ |
H A D | swift_verification.cpp | 22 TSequence seq_1 = String<Dna, FileReader<Fasta> >("../../demos/sequence_2.fa"); in main() local 26 TInfix infix_1 = infix(seq_1, 1029, 1163); in main() 37 assignSource(row(align, 1), seq_1); in main() 63 extendSeed(seed, 5*(-penalty), scoreMatrix, seq_0, seq_1, 2, GappedXDrop()); in main() 69 appendValue(leftExtensions, infix(seq_1, leftPosition(seed, 1), locAliBegin_1)); in main() 87 appendValue(rightExtensions, infix(seq_1, locAliEnd_1, rightPosition(seed, 1) + 1)); in main()
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/dports/cad/cascade-compiler/cascade-f4f7ae8bd1dd379790c0e58c286df90b8d1cdcde/test/regression/ |
H A D | simple.cc | 336 TEST(simple, seq_1) { in TEST() argument
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/dports/databases/mariadb103-client/mariadb-10.3.34/storage/sequence/mysql-test/sequence/ |
H A D | simple.result | 35 show create table seq_1; 36 ERROR 42S02: Table 'test.seq_1' doesn't exist
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H A D | simple.test | 21 show create table seq_1;
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/dports/databases/mariadb103-server/mariadb-10.3.34/storage/sequence/mysql-test/sequence/ |
H A D | simple.result | 35 show create table seq_1; 36 ERROR 42S02: Table 'test.seq_1' doesn't exist
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H A D | simple.test | 21 show create table seq_1;
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/dports/databases/mariadb104-client/mariadb-10.4.24/storage/sequence/mysql-test/sequence/ |
H A D | simple.result | 35 show create table seq_1; 36 ERROR 42S02: Table 'test.seq_1' doesn't exist
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H A D | simple.test | 21 show create table seq_1;
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/dports/databases/mariadb104-server/mariadb-10.4.24/storage/sequence/mysql-test/sequence/ |
H A D | simple.result | 35 show create table seq_1; 36 ERROR 42S02: Table 'test.seq_1' doesn't exist
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H A D | simple.test | 21 show create table seq_1;
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/dports/databases/mariadb105-client/mariadb-10.5.15/mysql-test/suite/binlog/r/ |
H A D | binlog_empty_xa_prepared.result | 1 CREATE TEMPORARY SEQUENCE seq_1; 10 DROP TEMPORARY SEQUENCE seq_1; 12 ALTER SEQUENCE seq_1 INCREMENT BY 1; 23 master-bin.000001 # Query # # use `test`; CREATE TEMPORARY SEQUENCE seq_1
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