Home
last modified time | relevance | path

Searched refs:seq_end (Results 1 – 25 of 546) sorted by path

12345678910>>...22

/dports/accessibility/wl-gammarelay-rs/wl-gammarelay-rs-0.2.1/cargo-crates/log-0.4.14/src/kv/
H A Dsource.rs521 .seq_end() in stream()
/dports/audio/gnome-podcasts/podcasts-c86f7bfdef7692bbf20f315a90450321f6ca9ce7/cargo-crates/log-0.4.14/src/kv/
H A Dsource.rs521 .seq_end() in stream()
/dports/audio/gnome-podcasts/podcasts-c86f7bfdef7692bbf20f315a90450321f6ca9ce7/cargo-crates/unicode-bidi-0.3.7/src/
H A Ddeprecated.rs70 let mut seq_end = seq_start + 1; in visual_runs() localVariable
71 while seq_end < run_count { in visual_runs()
72 if levels[runs[seq_end].start] < max_level { in visual_runs()
75 seq_end += 1; in visual_runs()
79 runs[seq_start..seq_end].reverse(); in visual_runs()
81 seq_start = seq_end; in visual_runs()
H A Dlib.rs445 let mut seq_end = seq_start + 1; in visual_runs() localVariable
446 while seq_end < run_count { in visual_runs()
447 if self.levels[runs[seq_end].start] < max_level { in visual_runs()
450 seq_end += 1; in visual_runs()
454 runs[seq_start..seq_end].reverse(); in visual_runs()
456 seq_start = seq_end; in visual_runs()
/dports/audio/ncspot/ncspot-0.9.3/cargo-crates/log-0.4.14/src/kv/
H A Dsource.rs521 .seq_end() in stream()
/dports/audio/ncspot/ncspot-0.9.3/cargo-crates/unicode-bidi-0.3.7/src/
H A Ddeprecated.rs70 let mut seq_end = seq_start + 1; in visual_runs() localVariable
71 while seq_end < run_count { in visual_runs()
72 if levels[runs[seq_end].start] < max_level { in visual_runs()
75 seq_end += 1; in visual_runs()
79 runs[seq_start..seq_end].reverse(); in visual_runs()
81 seq_start = seq_end; in visual_runs()
H A Dlib.rs445 let mut seq_end = seq_start + 1; in visual_runs() localVariable
446 while seq_end < run_count { in visual_runs()
447 if self.levels[runs[seq_end].start] < max_level { in visual_runs()
450 seq_end += 1; in visual_runs()
454 runs[seq_start..seq_end].reverse(); in visual_runs()
456 seq_start = seq_end; in visual_runs()
/dports/audio/spotify-tui/spotify-tui-0.25.0/cargo-crates/unicode-bidi-0.3.4/src/
H A Ddeprecated.rs71 let mut seq_end = seq_start + 1;
72 while seq_end < run_count {
73 if levels[runs[seq_end].start] < max_level {
76 seq_end += 1;
80 runs[seq_start..seq_end].reverse();
82 seq_start = seq_end;
H A Dlib.rs448 let mut seq_end = seq_start + 1; in visual_runs() localVariable
449 while seq_end < run_count { in visual_runs()
450 if self.levels[runs[seq_end].start] < max_level { in visual_runs()
453 seq_end += 1; in visual_runs()
457 runs[seq_start..seq_end].reverse(); in visual_runs()
459 seq_start = seq_end; in visual_runs()
/dports/audio/spotifyd/spotifyd-0.3.0/cargo-crates/unicode-bidi-0.3.4/src/
H A Ddeprecated.rs71 let mut seq_end = seq_start + 1;
72 while seq_end < run_count {
73 if levels[runs[seq_end].start] < max_level {
76 seq_end += 1;
80 runs[seq_start..seq_end].reverse();
82 seq_start = seq_end;
H A Dlib.rs448 let mut seq_end = seq_start + 1;
449 while seq_end < run_count {
450 if self.levels[runs[seq_end].start] < max_level {
453 seq_end += 1;
457 runs[seq_start..seq_end].reverse();
459 seq_start = seq_end;
/dports/audio/supercollider/SuperCollider-3.11.0-Source/external_libraries/yaml-cpp/test/
H A Dcreate-emitter-tests.py68 def seq_end(): function
94 [seq_end()],
103 …[[scalar('foo')], [seq_start(), scalar('foo'), seq_end()], [map_start(), scalar('foo'), scalar('ba…
104 …[[scalar('foo')], [seq_start(), scalar('foo'), seq_end()], [map_start(), scalar('foo'), scalar('ba…
109 …[[scalar('foo')], [seq_start(), scalar('foo'), seq_end()], [map_start(), scalar('foo'), scalar('ba…
110 …[[scalar('foo')], [seq_start(), scalar('foo'), seq_end()], [map_start(), scalar('foo'), scalar('ba…
111 [seq_end()],
/dports/benchmarks/inferno/inferno-0.10.9/cargo-crates/log-0.4.14/src/kv/
H A Dsource.rs521 .seq_end() in stream()
/dports/biology/emboss/EMBOSS-6.6.0/emboss/
H A Dpepinfo.c50 static ajint seq_end; variable
131 seq_end = ajSeqGetEnd(inseq); in main()
180 AJCNEW(ival,(seq_end-seq_start)); in main()
183 for(j = seq_start; j < seq_end; j++) in main()
221 seq_begin, seq_end); in main()
228 hist->bins = seq_end - seq_begin +1; in main()
231 hist->xmax = (float) seq_end; in main()
246 seq_end); in main()
420 for(i = seq_start; i<seq_end; i++) in pepinfo_printIntResults()
501 npts = seq_end - seq_start; in pepinfo_plotGraph2Float()
[all …]
/dports/biology/fasta3/fasta-36.3.8/scripts/
H A Dann_feats_up_www.pl189 my ($seq_acc, $seq_start, $seq_end, $tmp);
202 ($tmp, $seq_acc, $seq_start, $seq_end) = split(/\s+/,$gff_line);
203 $seq_len = $seq_end if ($seq_end > $seq_len);
H A Dann_feats_up_www2.pl217 my ($seq_acc, $seq_start, $seq_end, $tmp);
230 ($tmp, $seq_acc, $seq_start, $seq_end) = split(/\s+/,$gff_line);
231 $seq_len = $seq_end if ($seq_end > $seq_len);
H A Dann_feats_up_www2_e.pl216 my ($seq_acc, $seq_start, $seq_end, $tmp);
229 ($tmp, $seq_acc, $seq_start, $seq_end) = split(/\s+/,$gff_line);
230 $seq_len = $seq_end if ($seq_end > $seq_len);
H A Dann_pdb_cath.pl205 $row_href->{seq_end} = $row_href->{p_stop} - $sp_offset;
209 $row_href->{seq_end} = $row_href->{s_stop} - $sp_offset;
213 $seq_length = $row_href->{seq_end};
216 $row_href->{seq_end} = $seq_length if ($row_href->{seq_end} > $seq_length);
227 $cath_domains[$i-1]->{seq_end} -= $delta/2;
228 $cath_domains[$i]->{seq_start} = $cath_domains[$i-1]->{seq_end}+1;
234 my $prev_dom={seq_end=>0};
236 if ($cur_dom{seq_start} - $prev_dom{seq_end} > $min_nodom) {
237 …my %new_dom = (seq_start=>$prev_dom->{seq_end}+1, seq_end => $cur_dom->{seq_start}-1, info=>'NODOM…
243 my %new_dom = (seq_start=>$prev_dom->{seq_end}+1, seq_end=>$seq_length, info=>'NODOM');
[all …]
H A Dann_pfam.pl254 …my ($prev_len, $cur_len) = ($prev_dom->{seq_end}-$prev_dom->{seq_start}+1, $curr_dom->{seq_end}-$c…
255 …r_dom->{seq_start} >= $prev_dom->{seq_start}) && ($curr_dom->{seq_end} <= $prev_dom->{seq_end})) ||
256 …rr_dom->{seq_start} <= $prev_dom->{seq_start}) && ($curr_dom->{seq_end} >= $prev_dom->{seq_end})));
265 …($prev_len, $cur_len) = ($prev_dom->{seq_end}-$prev_dom->{seq_start}+1, $curr_dom->{seq_end}-$curr…
267 …r_dom->{seq_start} >= $prev_dom->{seq_start}) && ($curr_dom->{seq_end} <= $prev_dom->{seq_end})) ||
268 …rr_dom->{seq_start} <= $prev_dom->{seq_start}) && ($curr_dom->{seq_end} >= $prev_dom->{seq_end})));
300 $pf_domains[$i-1]->{seq_end} -= int($overlap/2);
308 my $prev_dom={seq_end=>0};
311 …my %new_dom = (seq_start=>$prev_dom->{seq_end}+1, seq_end => $curr_dom->{seq_start}-1, info=>'NODO…
318 my %new_dom = (seq_start=>$prev_dom->{seq_end}+1, seq_end=>$seq_length, info=>'NODOM');
[all …]
H A Dann_pfam26.pl252 …my ($prev_len, $cur_len) = ($prev_dom->{seq_end}-$prev_dom->{seq_start}+1, $curr_dom->{seq_end}-$c…
253 …r_dom->{seq_start} >= $prev_dom->{seq_start}) && ($curr_dom->{seq_end} <= $prev_dom->{seq_end})) ||
254 …rr_dom->{seq_start} <= $prev_dom->{seq_start}) && ($curr_dom->{seq_end} >= $prev_dom->{seq_end})));
263 …($prev_len, $cur_len) = ($prev_dom->{seq_end}-$prev_dom->{seq_start}+1, $curr_dom->{seq_end}-$curr…
265 …r_dom->{seq_start} >= $prev_dom->{seq_start}) && ($curr_dom->{seq_end} <= $prev_dom->{seq_end})) ||
266 …rr_dom->{seq_start} <= $prev_dom->{seq_start}) && ($curr_dom->{seq_end} >= $prev_dom->{seq_end})));
298 $pf_domains[$i-1]->{seq_end} -= int($overlap/2);
306 my $prev_dom={seq_end=>0};
308 …my %new_dom = (seq_start=>$prev_dom->{seq_end}+1, seq_end => $curr_dom->{seq_start}-1, info=>'NODO…
315 my %new_dom = (seq_start=>$prev_dom->{seq_end}+1, seq_end=>$seq_length, info=>'NODOM');
[all …]
H A Dann_pfam28_e.pl293 if ($row_href->{seq_end} > $seq_length) {
294 $row_href->{seq_end} = $seq_length;
325 $prev_dom->{seq_end} = $curr_dom->{seq_end};
354 …rr_dom->{seq_start} <= $prev_dom->{seq_start}) && ($curr_dom->{seq_end} >= $prev_dom->{seq_end})));
363 …($prev_len, $cur_len) = ($prev_dom->{seq_end}-$prev_dom->{seq_start}+1, $curr_dom->{seq_end}-$curr…
366 …rr_dom->{seq_start} <= $prev_dom->{seq_start}) && ($curr_dom->{seq_end} >= $prev_dom->{seq_end})));
426 $prev_dom_end = $prev_dom->{seq_end};
463 seq_end=> $curr_dom->{seq_end}+$right_dom_len,
498 my $prev_dom={seq_end=>0};
501 …my %new_dom = (seq_start=>$prev_dom->{seq_end}+1, seq_end => $curr_dom->{seq_start}-1, info=>'NODO…
[all …]
H A Dann_pfam_e.pl281 if ($row_href->{seq_end} > $seq_length) {
282 $row_href->{seq_end} = $seq_length;
306 …my ($prev_len, $cur_len) = ($prev_dom->{seq_end}-$prev_dom->{seq_start}+1, $curr_dom->{seq_end}-$c…
307 …r_dom->{seq_start} >= $prev_dom->{seq_start}) && ($curr_dom->{seq_end} <= $prev_dom->{seq_end})) ||
308 …rr_dom->{seq_start} <= $prev_dom->{seq_start}) && ($curr_dom->{seq_end} >= $prev_dom->{seq_end})));
317 …($prev_len, $cur_len) = ($prev_dom->{seq_end}-$prev_dom->{seq_start}+1, $curr_dom->{seq_end}-$curr…
319 …r_dom->{seq_start} >= $prev_dom->{seq_start}) && ($curr_dom->{seq_end} <= $prev_dom->{seq_end})) ||
320 …rr_dom->{seq_start} <= $prev_dom->{seq_start}) && ($curr_dom->{seq_end} >= $prev_dom->{seq_end})));
360 my $prev_dom={seq_end=>0};
363 …my %new_dom = (seq_start=>$prev_dom->{seq_end}+1, seq_end => $curr_dom->{seq_start}-1, info=>'NODO…
[all …]
/dports/biology/hhsuite/hh-suite-3.3.0/scripts/
H A Dhhmakemodel.py579 seq_end = seq_start + len(templatealignment)
604 for pos, col in enumerate(range(seq_start, seq_end)):
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/align/prosplign/
H A DNSeq.cpp89 TSeqPos seq_end = sequence::GetLength(*genomic.GetId(), &scope)-1; in Init() local
92 if (loc_end<=seq_end) in Init()
95 CRef<CSeq_loc> extra_seqloc(new CSeq_loc(*seqid,seq_end+1,loc_end,genomic.GetStrand()) ); in Init()
108 if (pos<seq_end) { in Init()
110 if (pos1 > seq_end) in Init()
111 pos1 = seq_end; in Init()
H A Dprosplign.cpp1294 TSeqPos seq_end = sequence::GetLength(nucid, m_scope)-1; in HasStopOnNuc() local
1296 if (sps.GetGenomic_strand()==eNa_strand_plus && seq_end<stop_codon_end) in HasStopOnNuc()

12345678910>>...22