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/dports/biology/jalview/jalview/test/jalview/datamodel/
H A DAlignedCodonFrameTest.java76 AlignedCodonFrame acf = new AlignedCodonFrame(); in testFindAlignedSequence() local
116 AlignedCodonFrame acf = new AlignedCodonFrame(); in testGetMappedRegion() local
177 AlignedCodonFrame acf = new AlignedCodonFrame(); in testGetMappedCodons() local
214 AlignedCodonFrame acf = new AlignedCodonFrame(); in testGetMappedCodons_dnaVariants() local
251 AlignedCodonFrame acf = new AlignedCodonFrame(); in testGetMappedCodons_forSubSequences() local
332 AlignedCodonFrame acf = new AlignedCodonFrame(); in testIsRealisableWith() local
391 AlignedCodonFrame acf = new AlignedCodonFrame(); in testRealiseWith() local
436 AlignedCodonFrame acf = new AlignedCodonFrame(); in testGetMappedRegion_eitherWay() local
492 AlignedCodonFrame acf = new AlignedCodonFrame(); in testAddMap() local
518 AlignedCodonFrame acf = new AlignedCodonFrame(); in testGetCoveringMapping() local
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/dports/finance/R-cran-vars/vars/R/
H A Dplot.varest.R2 …main.acf = NULL, main.pacf = NULL, ylim.fit = NULL, ylim.resid = NULL, lty.fit = NULL, lty.resid =…
40 …plotest <- function(y, fitted, resids, main.fit, main.acf, main.pacf, ylab.fit, ylab.resid, ylab.a…
H A Dplot.varcheck.R2 …main.acf = NULL, main.pacf = NULL, main.acf2 = NULL, main.pacf2 = NULL, ylim.resid = NULL, ylim.hi…
36 …plotcheck <- function(resid, main.resid, ylab.resid, xlab.resid, main.hist, main.acf, main.pacf, m…
/dports/science/py-rmf/rmf-1.3.1/src/
H A Dvalidate.cpp26 decorator::ResidueFactory rcf, decorator::AtomFactory acf) { in validate_impl()
44 decorator::AtomFactory acf(fh); in validate() local
H A Dsignature.cpp39 decorator::AtomFactory acf, decorator::ChainFactory chaincf, in get_static_signature()
92 decorator::AtomFactory acf, decorator::ChainFactory chaincf, in get_frame_signature()
140 decorator::AtomFactory acf(file); in get_signature_string() local
/dports/science/rmf/rmf-1.3.1/src/
H A Dvalidate.cpp26 decorator::ResidueFactory rcf, decorator::AtomFactory acf) { in validate_impl()
44 decorator::AtomFactory acf(fh); in validate() local
H A Dsignature.cpp39 decorator::AtomFactory acf, decorator::ChainFactory chaincf, in get_static_signature()
92 decorator::AtomFactory acf, decorator::ChainFactory chaincf, in get_frame_signature()
140 decorator::AtomFactory acf(file); in get_signature_string() local
/dports/math/octave-forge-tsa/tsa-4.6.3/inst/
H A Dacovf.m85 acf = filter(Z(L,lc:-1:1),1,Z(L,:)); variable
109 acf = filter(M(L,lc:-1:1),1,M(L,:)); variable
/dports/biology/jalview/jalview/test/jalview/util/
H A DMappingUtilsTest.java97 AlignedCodonFrame acf = new AlignedCodonFrame(); in testBuildSearchResults() local
151 AlignedCodonFrame acf = new AlignedCodonFrame(); in testBuildSearchResults_withIntron() local
232 AlignedCodonFrame acf = new AlignedCodonFrame(); in testMapSequenceGroup_sequences() local
402 AlignedCodonFrame acf = new AlignedCodonFrame(); in setupMappedAlignments() local
523 AlignedCodonFrame acf = new AlignedCodonFrame(); in testMapSequenceGroup_columns() local
608 AlignedCodonFrame acf = new AlignedCodonFrame(); in testMapSequenceGroup_region() local
841 AlignedCodonFrame acf = new AlignedCodonFrame(); in testMapEditCommand() local
1396 AlignedCodonFrame acf = new AlignedCodonFrame(); in testMapSequenceGroup_sharedDataset() local
/dports/lang/spidermonkey60/firefox-60.9.0/gfx/skia/skia/src/gpu/
H A DGrRenderTargetContext.cpp270 AutoCheckFlush acf(this->drawingManager()); in discard() local
283 AutoCheckFlush acf(this->drawingManager()); in clear() local
503 AutoCheckFlush acf(this->drawingManager()); in drawRect() local
724 AutoCheckFlush acf(this->drawingManager()); in fillRectToRect() local
811 AutoCheckFlush acf(this->drawingManager()); in fillRectWithLocalMatrix() local
853 AutoCheckFlush acf(this->drawingManager()); in drawVertices() local
878 AutoCheckFlush acf(this->drawingManager()); in drawAtlas() local
917 AutoCheckFlush acf(this->drawingManager()); in drawRRect() local
990 AutoCheckFlush acf(this->drawingManager()); in drawFastShadow() local
1241 AutoCheckFlush acf(this->drawingManager()); in drawDRRect() local
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/dports/www/firefox-legacy/firefox-52.8.0esr/gfx/skia/skia/src/gpu/
H A DGrDrawContext.cpp193 AutoCheckFlush acf(fDrawingManager); in discard() local
205 AutoCheckFlush acf(fDrawingManager); in clear() local
455 AutoCheckFlush acf(fDrawingManager); in drawRect() local
645 AutoCheckFlush acf(fDrawingManager); in fillRectToRect() local
704 AutoCheckFlush acf(fDrawingManager); in fillRectWithLocalMatrix() local
762 AutoCheckFlush acf(fDrawingManager); in drawVertices() local
796 AutoCheckFlush acf(fDrawingManager); in drawAtlas() local
835 AutoCheckFlush acf(fDrawingManager); in drawRRect() local
955 AutoCheckFlush acf(fDrawingManager); in drawDRRect() local
1017 AutoCheckFlush acf(fDrawingManager); in drawOval() local
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/dports/science/py-rmf/rmf-1.3.1/examples/
H A Dadd_bonds.py7 def copy_to_residues(pin, pout, rcf, rf, pcf, pf, acf, af, ccf, cf, bf, prev): argument
65 acf = RMF.AtomFactory(fh) variable
/dports/science/rmf/rmf-1.3.1/examples/
H A Dadd_bonds.py7 def copy_to_residues(pin, pout, rcf, rf, pcf, pf, acf, af, ccf, cf, bf, prev): argument
65 acf = RMF.AtomFactory(fh) variable
/dports/biology/jalview/jalview/test/jalview/analysis/
H A DAlignmentUtilsTests.java294 AlignedCodonFrame acf = protein.getCodonFrame(protein.getSequenceAt(0)) in testMapProteinAlignmentToCdna_noXrefs() local
460 AlignedCodonFrame acf = new AlignedCodonFrame(); in checkAlignSequenceAs() local
510 AlignedCodonFrame acf = new AlignedCodonFrame(); in testAlignProteinAsDna() local
639 AlignedCodonFrame acf = protein.getCodonFrame(protein.getSequenceAt(0)) in testMapProteinAlignmentToCdna_withStartAndStopCodons() local
1039 AlignedCodonFrame acf = new AlignedCodonFrame(); in testMakeCdsAlignment() local
1266 AlignedCodonFrame acf = new AlignedCodonFrame(); in testMakeCdsAlignment_multipleProteins() local
1463 AlignedCodonFrame acf = new AlignedCodonFrame(); in testAlignSequenceAs_mappedProteinProtein() local
1662 AlignedCodonFrame acf = new AlignedCodonFrame(); in testMakeCdsAlignment_alternativeTranscripts() local
1779 AlignedCodonFrame acf = new AlignedCodonFrame(); in testAlignProteinAsDna_incompleteStartCodon() local
2002 AlignedCodonFrame acf = new AlignedCodonFrame(); in testAlignAs_alternateTranscriptsUngapped() local
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/dports/science/dynare/dynare-4.6.4/matlab/
H A Ddyn_autocorr.m34 acf = NaN(ar+1,1); variable
/dports/math/R/R-4.1.2/src/library/stats/R/
H A Dacf.R20 function (x, lag.max = NULL,
51 acf <- .Call(C_acf, x, lag.max, type == "correlation") functionVar
53 acf.out <- structure(list(acf = acf, type = type, n.used = sampleT, nameattr
88 acf <- drop(acf(x, lag.max = lag.max, plot = FALSE, functionVar
95 acf.out <- structure(.Data = list(acf = pacf, type = "partial", nameattr
/dports/math/libRmath/R-4.1.1/src/library/stats/R/
H A Dacf.R20 function (x, lag.max = NULL,
51 acf <- .Call(C_acf, x, lag.max, type == "correlation") functionVar
53 acf.out <- structure(list(acf = acf, type = type, n.used = sampleT, nameattr
88 acf <- drop(acf(x, lag.max = lag.max, plot = FALSE, functionVar
95 acf.out <- structure(.Data = list(acf = pacf, type = "partial", nameattr
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/blastinput/unit_test/
H A Dblast_scope_src_unit_test.cpp178 CAutoNcbiConfigFile acf(SDataLoaderConfig::eUseBlastDbDataLoader); in BOOST_AUTO_TEST_CASE() local
209 CAutoNcbiConfigFile acf(SDataLoaderConfig::eUseBlastDbDataLoader); in BOOST_AUTO_TEST_CASE() local
240 CAutoNcbiConfigFile acf(SDataLoaderConfig::eUseBlastDbDataLoader); in BOOST_AUTO_TEST_CASE() local
270 CAutoNcbiConfigFile acf(SDataLoaderConfig::eUseGenbankDataLoader); in BOOST_AUTO_TEST_CASE() local
292 CAutoNcbiConfigFile acf(SDataLoaderConfig::eUseNoDataLoaders); in BOOST_AUTO_TEST_CASE() local
391 CAutoNcbiConfigFile acf(SDataLoaderConfig::eUseBlastDbDataLoader); in BOOST_AUTO_TEST_CASE() local
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/blastinput/unit_test/
H A Dblast_scope_src_unit_test.cpp178 CAutoNcbiConfigFile acf(SDataLoaderConfig::eUseBlastDbDataLoader); in BOOST_AUTO_TEST_CASE() local
209 CAutoNcbiConfigFile acf(SDataLoaderConfig::eUseBlastDbDataLoader); in BOOST_AUTO_TEST_CASE() local
240 CAutoNcbiConfigFile acf(SDataLoaderConfig::eUseBlastDbDataLoader); in BOOST_AUTO_TEST_CASE() local
270 CAutoNcbiConfigFile acf(SDataLoaderConfig::eUseGenbankDataLoader); in BOOST_AUTO_TEST_CASE() local
292 CAutoNcbiConfigFile acf(SDataLoaderConfig::eUseNoDataLoaders); in BOOST_AUTO_TEST_CASE() local
391 CAutoNcbiConfigFile acf(SDataLoaderConfig::eUseBlastDbDataLoader); in BOOST_AUTO_TEST_CASE() local
/dports/www/glassfish/glassfish5/mq/examples/jmx/
H A DSimpleClient.java20 AdminConnectionFactory acf; in main() local
H A DListDestinations.java21 AdminConnectionFactory acf; in main() local
/dports/www/payara/payara5/mq/examples/jmx/
H A DSimpleClient.java50 AdminConnectionFactory acf; in main() local
H A DListDestinations.java51 AdminConnectionFactory acf; in main() local
/dports/www/chromium-legacy/chromium-88.0.4324.182/third_party/skia/src/gpu/
H A DGrRenderTargetContext.cpp497 AutoCheckFlush acf(this->drawingManager()); in discard() local
755 AutoCheckFlush acf(this->drawingManager()); in drawFilledQuad() local
793 AutoCheckFlush acf(this->drawingManager()); in drawTexturedQuad() local
833 AutoCheckFlush acf(this->drawingManager()); in drawRect() local
1008 AutoCheckFlush acf(this->drawingManager()); in drawTextureSet() local
1028 AutoCheckFlush acf(this->drawingManager()); in drawVertices() local
1053 AutoCheckFlush acf(this->drawingManager()); in drawAtlas() local
1120 AutoCheckFlush acf(this->drawingManager()); in drawRRect() local
1205 AutoCheckFlush acf(this->drawingManager()); in drawFastShadow() local
1459 AutoCheckFlush acf(this->drawingManager()); in drawDRRect() local
[all …]
/dports/www/firefox-esr/firefox-91.8.0/gfx/skia/skia/src/gpu/
H A DGrRenderTargetContext.cpp256 AutoCheckFlush acf(this->drawingManager()); in discard() local
269 AutoCheckFlush acf(this->drawingManager()); in clear() local
581 AutoCheckFlush acf(this->drawingManager()); in drawFilledQuad() local
625 AutoCheckFlush acf(this->drawingManager()); in drawTexturedQuad() local
670 AutoCheckFlush acf(this->drawingManager()); in drawRect() local
925 AutoCheckFlush acf(this->drawingManager()); in drawVertices() local
949 AutoCheckFlush acf(this->drawingManager()); in drawAtlas() local
992 AutoCheckFlush acf(this->drawingManager()); in drawRRect() local
1078 AutoCheckFlush acf(this->drawingManager()); in drawFastShadow() local
1333 AutoCheckFlush acf(this->drawingManager()); in drawDRRect() local
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