| /dports/devel/rpclib/rpclib-2.2.1/examples/calculator/ |
| H A D | calculator_client.cc | 23 double hmm = c.call("div", 3, 0).as<double>(); in main() local
|
| /dports/biology/bbmap/bbmap/current/hmm/ |
| H A D | ProteinSummary.java | 1 package hmm; package
|
| /dports/audio/pocketsphinx/pocketsphinx-0.8/src/libpocketsphinx/ |
| H A D | ngram_search_fwdflat.c | 313 chan_t *hmm, *prevhmm; in build_fwdflat_chan() local
425 chan_t *hmm; in compute_fwdflat_sen_active() local
452 chan_t *hmm; in fwdflat_eval_chan() local
489 chan_t *hmm, *nexthmm; in fwdflat_prune_chan() local
784 chan_t *hmm; in fwdflat_renormalize_scores() local
|
| /dports/biology/infernal/infernal-1.1.3/hmmer/src/ |
| H A D | generic_fwdback.c | 368 P7_HMM *hmm = NULL; in main() local
498 P7_PROFILE *gm, P7_HMM *hmm, P7_BG *bg, int nseq) in utest_generation()
552 P7_HMM *hmm = NULL; in utest_enumeration() local
659 P7_HMM *hmm = NULL; in main() local
732 P7_HMM *hmm = NULL; in main() local
|
| H A D | evalues.c | 58 p7_Calibrate(P7_HMM *hmm, P7_BUILDER *cfg_b, ESL_RANDOMNESS **byp_rng, P7_BG **byp_bg, P7_PROFILE *… in p7_Calibrate()
184 p7_Lambda(P7_HMM *hmm, P7_BG *bg, double *ret_lambda) in p7_Lambda()
512 P7_HMM *hmm = NULL; in main() local
619 P7_HMM *hmm = NULL; in main() local
|
| H A D | generic_viterbi.c | 364 P7_HMM *hmm = NULL; in main() local
444 P7_HMM *hmm = NULL; in utest_basic() local
578 P7_HMM *hmm = NULL; in main() local
646 P7_HMM *hmm = NULL; in main() local
|
| H A D | hmmalign.c | 94 P7_HMM *hmm = NULL; in main() local
228 map_alignment(const char *msafile, const P7_HMM *hmm, ESL_SQ ***ret_sq, P7_TRACE ***ret_tr, int *re… in map_alignment()
|
| H A D | generic_stotrace.c | 236 P7_HMM *hmm = NULL; in main() local
370 P7_HMM *hmm = NULL; in main() local
451 P7_HMM *hmm = NULL; in main() local
|
| /dports/biology/hmmer/hmmer-3.3/src/ |
| H A D | generic_fwdback.c | 368 P7_HMM *hmm = NULL; in main() local
498 P7_PROFILE *gm, P7_HMM *hmm, P7_BG *bg, int nseq) in utest_generation()
552 P7_HMM *hmm = NULL; in utest_enumeration() local
659 P7_HMM *hmm = NULL; in main() local
732 P7_HMM *hmm = NULL; in main() local
|
| H A D | evalues.c | 58 p7_Calibrate(P7_HMM *hmm, P7_BUILDER *cfg_b, ESL_RANDOMNESS **byp_rng, P7_BG **byp_bg, P7_PROFILE *… in p7_Calibrate()
184 p7_Lambda(P7_HMM *hmm, P7_BG *bg, double *ret_lambda) in p7_Lambda()
512 P7_HMM *hmm = NULL; in main() local
619 P7_HMM *hmm = NULL; in main() local
|
| H A D | generic_viterbi.c | 364 P7_HMM *hmm = NULL; in main() local
444 P7_HMM *hmm = NULL; in utest_basic() local
578 P7_HMM *hmm = NULL; in main() local
646 P7_HMM *hmm = NULL; in main() local
|
| H A D | hmmalign.c | 94 P7_HMM *hmm = NULL; in main() local
228 map_alignment(const char *msafile, const P7_HMM *hmm, ESL_SQ ***ret_sq, P7_TRACE ***ret_tr, int *re… in map_alignment()
|
| /dports/multimedia/libv4l/linux-5.13-rc2/Documentation/vm/ |
| H A D | hmm.rst | 1 .. _hmm: target
|
| /dports/multimedia/v4l-utils/linux-5.13-rc2/Documentation/vm/ |
| H A D | hmm.rst | 1 .. _hmm: target
|
| /dports/multimedia/v4l_compat/linux-5.13-rc2/Documentation/vm/ |
| H A D | hmm.rst | 1 .. _hmm: target
|
| /dports/biology/ugene/ugene-40.1/src/plugins_3rdparty/hmm2/src/ |
| H A D | HMMIO.h | 83 plan7_s *hmm; variable
|
| /dports/devel/llvm13/llvm-project-13.0.1.src/llvm/test/Verifier/ |
| H A D | disubrange-count-upperBound.ll | 1 ; RUN: not llvm-as < %s -disable-output 2>&1 | FileCheck %s
|
| /dports/audio/julius/julius-4.1.2/libjulius/src/ |
| H A D | outprob_style.c | 144 lcdset_lookup_with_category(WCHMM_INFO *wchmm, HMM_Logical *hmm, WORD_ID category) in lcdset_lookup_with_category()
206 lcdset_register_with_category(WCHMM_INFO *wchmm, HMM_Logical *hmm, WORD_ID category) in lcdset_register_with_category()
|
| /dports/biology/wise/wise2.4.1/src/HMMer2/ |
| H A D | emulation.c | 90 WriteProfile(FILE *fp, struct plan7_s *hmm, int do_xsw) in WriteProfile()
|
| /dports/biology/ugene/ugene-40.1/src/plugins_3rdparty/hmm2/src/hmmer2/ |
| H A D | trace.cpp | 181 P7TraceCount(struct plan7_s *hmm, unsigned char *dsq, float wt, struct p7trace_s *tr) in P7TraceCount()
307 P7TraceScore(struct plan7_s *hmm, unsigned char *dsq, struct p7trace_s *tr) in P7TraceScore()
578 TransitionScoreLookup(struct plan7_s *hmm, char st1, int k1, in TransitionScoreLookup()
666 CreateFancyAli(struct p7trace_s *tr, struct plan7_s *hmm, in CreateFancyAli()
|
| /dports/math/mlpack/mlpack-3.4.2/src/mlpack/methods/hmm/ |
| H A D | hmm_generate_main.cpp | 134 HMMModel* hmm; in mlpackMain() local
|
| H A D | hmm_regression.hpp | 20 namespace hmm /** Hidden Markov Models. */ { namespace
|
| /dports/textproc/apertium/apertium-3.6.1/apertium/ |
| H A D | apertium_filter_ambiguity.cc | 94 HMM hmm(&tdhmm); in main() local
|
| /dports/biology/ugene/ugene-40.1/src/plugins_3rdparty/hmm2/src/u_search/ |
| H A D | uhmmsearch.cpp | 15 plan7_s *hmm = HMMIO::cloneHMM(_hmm); in search() local
148 …main_loop_serial(struct plan7_s *hmm, const char *seq, int seqLen, struct threshold_s *thresh, int… in main_loop_serial()
|
| /dports/biology/infernal/infernal-1.1.3/hmmer/src/impl_sse/ |
| H A D | vitscore.c | 269 P7_HMM *hmm = NULL; in main() local
359 P7_HMM *hmm = NULL; in utest_viterbi_score() local
486 P7_HMM *hmm = NULL; in main() local
|