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Searched refs:bq_s2 (Results 1 – 2 of 2) sorted by relevance

/dports/biology/vt/vt-0.57721/
H A Dpaste_and_compute_features_sequential.cpp465 int32_t bq_s2 = 0; in paste_and_compute_features_sequential() local
502 bq_s2 += (p_bq[l] * p_bq[l]); in paste_and_compute_features_sequential()
552 … float bqr = sqrt_dp_ra * compute_correlation( dp_ra, bq_al, bq_s1, bq_s2, al_s1, al_s1, .1 ); in paste_and_compute_features_sequential()
H A Dpaste_genotypes.cpp485 int32_t bq_s2 = 0; in paste_genotypes() local
522 bq_s2 += (p_bq[l] * p_bq[l]); in paste_genotypes()
572 … float bqr = sqrt_dp_ra * compute_correlation( dp_ra, bq_al, bq_s1, bq_s2, al_s1, al_s1, .1 ); in paste_genotypes()