Searched refs:gap_end_read (Results 1 – 1 of 1) sorted by relevance
1019 int gap_end_read = black_base_end + max(0,max_indel_recorder[i+2]); in explain_indel_in_middle() local1051 …if(current_operation != last_operation && (current_pos < gap_end_read-1+1 || current_operation == … in explain_indel_in_middle()1059 if(current_pos >= gap_end_read-1 || xx == moves - 1){ in explain_indel_in_middle()