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Searched refs:kmer_bit_size (Results 1 – 3 of 3) sorted by relevance

/dports/biology/velvet/velvet_1.2.10/src/
H A Dkmer.c71 kmer_bit_size -= 64; in resetWordFilter()
97 if (kmer_bit_size > 32) in resetWordFilter()
98 kmer_bit_size -= 32; in resetWordFilter()
117 if (kmer_bit_size > 16) in resetWordFilter()
118 kmer_bit_size -= 16; in resetWordFilter()
136 if (kmer_bit_size < 8) in resetWordFilter()
177 if (kmer_bit_size > 16) in resetKeyFilter()
178 kmer_bit_size -= 16; in resetKeyFilter()
200 if (kmer_bit_size > 32) in resetKeyFilter()
201 kmer_bit_size -= 32; in resetKeyFilter()
[all …]
/dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-1.2.01/Velvet-1.1.06/
H A Dkmer.c71 kmer_bit_size -= 64; in resetWordFilter()
97 if (kmer_bit_size > 32) in resetWordFilter()
98 kmer_bit_size -= 32; in resetWordFilter()
117 if (kmer_bit_size > 16) in resetWordFilter()
118 kmer_bit_size -= 16; in resetWordFilter()
136 if (kmer_bit_size < 8) in resetWordFilter()
177 if (kmer_bit_size > 16) in resetKeyFilter()
178 kmer_bit_size -= 16; in resetKeyFilter()
200 if (kmer_bit_size > 32) in resetKeyFilter()
201 kmer_bit_size -= 32; in resetKeyFilter()
[all …]
/dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-v0.3.1/src/
H A Dkmer.c49 int kmer_bit_size = wordLength * 2; in resetWordFilter() local
57 if (kmer_bit_size > 64) { in resetWordFilter()
58 kmer_bit_size -= 64; in resetWordFilter()
60 } else if (kmer_bit_size == 64) { in resetWordFilter()
82 if (kmer_bit_size > 32) in resetWordFilter()
83 kmer_bit_size -= 32; in resetWordFilter()
84 else if (kmer_bit_size == 32) { in resetWordFilter()
100 if (kmer_bit_size > 16) in resetWordFilter()
101 kmer_bit_size -= 16; in resetWordFilter()
102 else if (kmer_bit_size == 16) { in resetWordFilter()
[all …]