Searched refs:pairwiseDist (Results 1 – 1 of 1) sorted by relevance
148 PairwiseAlignBase* pairwiseDist; in align() local151 pairwiseDist = new FastPairwiseAlign(); in align()155 pairwiseDist = new FullPairwiseAlign(); in align()159 delete pairwiseDist; in align()390 PairwiseAlignBase* pairwiseDist; in sequencesAlignToProfile() local402 delete pairwiseDist; in sequencesAlignToProfile()694 PairwiseAlignBase* pairwiseDist; in doGuideTreeOnly() local697 pairwiseDist = new FastPairwiseAlign(); in doGuideTreeOnly()705 delete pairwiseDist; in doGuideTreeOnly()819 PairwiseAlignBase* pairwiseDist; in doAlignUseOldTree() local[all …]