Searched refs:score2_sums (Results 1 – 6 of 6) sorted by relevance
/dports/biology/fasta/fasta/ |
H A D | scalesws.c | 34 float *score_sums, *score2_sums, *score_var; variable 138 score2_sums = (float *)calloc((size_t)(max_llen + 1),sizeof(float)); in alloc_hist() 147 free(score2_sums); in free_hist() 167 score_sums[i] = score2_sums[i] = 0.0; in inithist() 198 score2_sums[llen] += ((float)score * (float)score); 263 score2_sums[llen] -= ((float)score * (float)score); 294 score_var[j] = score2_sums[j]/(float)llen_hist[j] in fit_llen() 347 var_y += (double)score2_sums[j]; in fit_llen() 456 score_var[j] = score2_sums[j]/(float)llen_hist[j] in fit_llens() 494 var_y += (double)score2_sums[j]; in fit_llens() [all …]
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H A D | scalesw2.c | 34 float *score_sums, *score2_sums, *score_var, *score_mu; variable 137 score2_sums = (float *)calloc((size_t)(max_llen + 1),sizeof(float)); in alloc_hist() 148 free(score2_sums); in free_hist() 168 score_sums[i] = score2_sums[i] = 0.0; in inithist() 199 score2_sums[llen] += ((float)score * (float)score); 264 score2_sums[llen] -= ((float)score * (float)score); 298 score_var[j] = score2_sums[j] - in fit_llen() 350 var_y += (double)score2_sums[j]; in fit_llen() 459 score_var[j] = score2_sums[j]/(float)llen_hist[j] in fit_llens() 497 var_y += (double)score2_sums[j]; in fit_llens() [all …]
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H A D | res_stats.c | 52 extern float *score_sums, *score2_sums; 523 var = ((float)score2_sums[i]-(float)llen_hist[i]*mu*mu)/ in do_bout() 528 score_sums[i],score2_sums[i],mu,var); in do_bout()
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/dports/biology/fasta3/fasta-36.3.8/src/ |
H A D | scaleswt.c | 130 double *score_sums, *score2_sums; member 493 llen->score2_sums =(double *)calloc((size_t)(max_llen + 1),sizeof(double)); in alloc_hist() 499 llen->score_var[i] = llen->score_sums[i] = llen->score2_sums[i] = 0.0; in alloc_hist() 508 free(llen->score2_sums); in free_hist() 556 llen->score2_sums[llength] += dscore * dscore; in addhist() 618 llen->score2_sums[llength] -= dscore * dscore; in prune_hist() 654 llen->score_var[j] = llen->score2_sums[j]/dllj in fit_llen() 715 var_y += llen->score2_sums[j]; in fit_llen() 805 llen->score_var[j] = (double)llen->score2_sums[j]/dllj in fit_llens() 844 var_y += llen->score2_sums[j]; in fit_llens() [all …]
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H A D | scaleswn.c | 185 double *score_sums, *score2_sums; member 1676 llen->score_var[i] = llen->score_sums[i] = llen->score2_sums[i] = 0.0; in alloc_hist() 1685 free(llen->score2_sums); in free_hist() 1738 llen->score2_sums[llength] += dscore * dscore; in addhist() 1863 llen->score2_sums[llength] -= dscore * dscore; in prune_hist() 1901 llen->score_var[j] = llen->score2_sums[j]/dllj in fit_llen() 1966 var_y += llen->score2_sums[j]; in fit_llen() 2057 llen->score_var[j] = (double)llen->score2_sums[j]/dllj in fit_llens() 2117 var_y += llen->score2_sums[j]; in fit_llens() 2233 llen->score_var[j] = llen->score2_sums[j]/dllj in fit_llen2() [all …]
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/dports/biology/fasta3/fasta-36.3.8/doc/ |
H A D | readme.v33t0 | 302 score2_sums[], score_sums[] from int to double.
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