/dports/biology/viennarna/ViennaRNA-2.4.18/src/ViennaRNA/plotting/ |
H A D | structures.h | 81 const char *ssfile, 93 const char *ssfile, 113 char *ssfile, 130 char *ssfile); 144 char *ssfile); 158 char *ssfile); 192 char *ssfile,
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H A D | structures.c | 120 if (!ssfile) { in vrna_file_PS_rnaplot_layout() 143 ssfile, in vrna_file_PS_rnaplot_layout() 185 xyplot = fopen(ssfile, "w"); in rnaplot_EPS() 318 char *ssfile, in gmlRNA() argument 327 gmlfile = fopen(ssfile, "w"); in gmlRNA() 414 xyplot = fopen(ssfile, "w"); in PS_rna_plot_snoop_a() 740 char *ssfile) in svg_rna_plot() argument 929 char *ssfile) in ssv_rna_plot() argument 1020 char *ssfile) in xrna_plot() argument 1074 char *ssfile) in PS_rna_plot() argument [all …]
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/dports/textproc/texi2html/texi2html-5.0/test/manuals/res_all/ccvs_mediawiki_nosplit/ |
H A D | cvs: Annotate command | 18 $ cvs annotate ssfile 19 Annotations for ssfile 21 1.1 (mary 27-Mar-96): ssfile line 1 22 1.2 (joe 28-Mar-96): ssfile line 2 25 …ssfile</tt>’ currently contains two lines. The <code>ssfile line 1</code> line was checked i…
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/dports/textproc/texi2html/texi2html-5.0/test/manuals/res_info/ccvs_mediawiki_nosplit/ |
H A D | cvs: Annotate command | 18 $ cvs annotate ssfile 19 Annotations for ssfile 21 1.1 (mary 27-Mar-96): ssfile line 1 22 1.2 (joe 28-Mar-96): ssfile line 2 25 …ssfile</tt>’ currently contains two lines. The <code>ssfile line 1</code> line was checked i…
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/dports/biology/viennarna/ViennaRNA-2.4.18/doc/refman.include/ |
H A D | plotting.dox | 31 char *ssfile, 39 char *ssfile) 46 char *ssfile) 53 char *ssfile)
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/dports/net/freebsd-uucp/freebsd-uucp-r1_07_4/uucp/libunix/ |
H A D | work.c | 82 struct ssfile *qfile; 86 struct ssfile struct 102 static struct ssfile *qSwork_file; argument 457 struct ssfile *qfile; 496 qfile = (struct ssfile *) xmalloc (sizeof (struct ssfile)); 511 ((struct ssfile *) 513 (sizeof (struct ssfile) + 614 struct ssfile *qfile;
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/dports/biology/viennarna/ViennaRNA-2.4.18/doc/latex/ |
H A D | plotting_2structures_8h_source.tex | 42 … \textcolor{keyword}{const} \textcolor{keywordtype}{char} *ssfile,} 54 …eLine{00093 \textcolor{keyword}{const} \textcolor{keywordtype}{char} *ssfile,} 62 \DoxyCodeLine{00113 \textcolor{keywordtype}{char} *ssfile,} 69 \DoxyCodeLine{00130 \textcolor{keywordtype}{char} *ssfile);} 75 \DoxyCodeLine{00144 \textcolor{keywordtype}{char} *ssfile);} 81 \DoxyCodeLine{00158 \textcolor{keywordtype}{char} *ssfile);} 98 \DoxyCodeLine{00192 \textcolor{keywordtype}{char} *ssfile,}
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H A D | plotting_2structures_8h.tex | 31 …4ff76ccb8f329}{gml\+RNA}} (char $\ast$string, char $\ast$structure, char $\ast$ssfile, char option) 33 …b680243541df}{ssv\+\_\+rna\+\_\+plot}} (char $\ast$string, char $\ast$structure, char $\ast$ssfile) 35 …af434e979304}{svg\+\_\+rna\+\_\+plot}} (char $\ast$string, char $\ast$structure, char $\ast$ssfile) 37 …23df898896b8d6614483}{xrna\+\_\+plot}} (char $\ast$string, char $\ast$structure, char $\ast$ssfile) 43 …+\_\+a\+\_\+gquad}} (char $\ast$string, char $\ast$structure, char $\ast$ssfile, char $\ast$pre, c…
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H A D | group__plotting__utils.tex | 67 …4ff76ccb8f329}{gml\+RNA}} (char $\ast$string, char $\ast$structure, char $\ast$ssfile, char option) 69 …b680243541df}{ssv\+\_\+rna\+\_\+plot}} (char $\ast$string, char $\ast$structure, char $\ast$ssfile) 71 …af434e979304}{svg\+\_\+rna\+\_\+plot}} (char $\ast$string, char $\ast$structure, char $\ast$ssfile) 73 …23df898896b8d6614483}{xrna\+\_\+plot}} (char $\ast$string, char $\ast$structure, char $\ast$ssfile) 243 {\em ssfile} & The filename of the gml output \\ 255 …\ast$}]{string, }\item[{char $\ast$}]{structure, }\item[{char $\ast$}]{ssfile }\end{DoxyParamCap… 273 {\em ssfile} & The filename of the ssv output \\ 283 …\ast$}]{string, }\item[{char $\ast$}]{structure, }\item[{char $\ast$}]{ssfile }\end{DoxyParamCap… 299 {\em ssfile} & The filename of the svg output \\ 309 …\ast$}]{string, }\item[{char $\ast$}]{structure, }\item[{char $\ast$}]{ssfile }\end{DoxyParamCap… [all …]
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/dports/textproc/texi2html/texi2html-5.0/test/manuals/res_all/ccvs_mediawiki/ |
H A D | cvs: History browsing | 138 $ cvs annotate ssfile 139 Annotations for ssfile 141 1.1 (mary 27-Mar-96): ssfile line 1 142 1.2 (joe 28-Mar-96): ssfile line 2 145 …ssfile</tt>’ currently contains two lines. The <code>ssfile line 1</code> line was checked i…
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/dports/textproc/texi2html/texi2html-5.0/test/manuals/res_info/ccvs_mediawiki/ |
H A D | cvs: History browsing | 138 $ cvs annotate ssfile 139 Annotations for ssfile 141 1.1 (mary 27-Mar-96): ssfile line 1 142 1.2 (joe 28-Mar-96): ssfile line 2 145 …ssfile</tt>’ currently contains two lines. The <code>ssfile line 1</code> line was checked i…
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/dports/textproc/texi2html/texi2html-5.0/test/manuals/res/ccvs_mediawiki/ |
H A D | cvs: History browsing | 193 $ cvs annotate ssfile 194 Annotations for ssfile 196 1.1 (mary 27-Mar-96): ssfile line 1 197 1.2 (joe 28-Mar-96): ssfile line 2 200 …ssfile</tt>’ currently contains two lines. The <code>ssfile line 1</code> line was checked i…
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/dports/java/openjdk16/jdk16u-jdk-16.0.2-7-1/src/jdk.javadoc/share/classes/jdk/javadoc/internal/doclets/formats/html/ |
H A D | HtmlOptions.java | 484 DocFile ssfile = DocFile.createFileForInput(config, ssheet); in validateOptions() local 485 if (!ssfile.exists()) { in validateOptions()
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/dports/java/openjdk17/jdk17u-jdk-17.0.1-12-1/src/jdk.javadoc/share/classes/jdk/javadoc/internal/doclets/formats/html/ |
H A D | HtmlOptions.java | 497 DocFile ssfile = DocFile.createFileForInput(config, ssheet); in validateOptions() local 498 if (!ssfile.exists()) { in validateOptions()
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/dports/java/openjdk15/jdk15u-jdk-15.0.6-1-1/src/jdk.javadoc/share/classes/jdk/javadoc/internal/doclets/formats/html/ |
H A D | HtmlOptions.java | 490 DocFile ssfile = DocFile.createFileForInput(config, ssheet); in validateOptions() local 491 if (!ssfile.exists()) { in validateOptions()
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/dports/biology/hisat2/hisat2-2.2.1/ |
H A D | hisat2_build.cpp | 445 const string& ssfile, in driver() argument 547 ssfile, in driver() 583 ssfile, in driver()
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H A D | rfm.h | 349 const string& ssfile, 636 const string& ssfile, in RFM() argument 668 ssfile, in RFM()
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/dports/java/openjdk13/jdk13u-jdk-13.0.10-1-1/src/jdk.javadoc/share/classes/jdk/javadoc/internal/doclets/formats/html/ |
H A D | HtmlConfiguration.java | 314 DocFile ssfile = DocFile.createFileForInput(this, ssheet); in validateOptions() local 315 if (!ssfile.exists()) { in validateOptions()
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/dports/java/openjdk14/jdk14u-jdk-14.0.2-12-1/src/jdk.javadoc/share/classes/jdk/javadoc/internal/doclets/formats/html/ |
H A D | HtmlConfiguration.java | 309 DocFile ssfile = DocFile.createFileForInput(this, ssheet); in validateOptions() local 310 if (!ssfile.exists()) { in validateOptions()
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/dports/java/openjdk11/jdk11u-jdk-11.0.13-8-1/src/jdk.javadoc/share/classes/jdk/javadoc/internal/doclets/formats/html/ |
H A D | HtmlConfiguration.java | 324 DocFile ssfile = DocFile.createFileForInput(this, ssheet); in validateOptions() local 325 if (!ssfile.exists()) { in validateOptions()
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/dports/java/openjdk12/openjdk-jdk12u-jdk-12.0.2-10-4/src/jdk.javadoc/share/classes/jdk/javadoc/internal/doclets/formats/html/ |
H A D | HtmlConfiguration.java | 328 DocFile ssfile = DocFile.createFileForInput(this, ssheet); in validateOptions() local 329 if (!ssfile.exists()) { in validateOptions()
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/dports/java/openjdk11-jre/jdk11u-jdk-11.0.13-8-1/src/jdk.javadoc/share/classes/jdk/javadoc/internal/doclets/formats/html/ |
H A D | HtmlConfiguration.java | 324 DocFile ssfile = DocFile.createFileForInput(this, ssheet); in validateOptions() local 325 if (!ssfile.exists()) { in validateOptions()
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/dports/biology/viennarna/ViennaRNA-2.4.18/interfaces/Python/ |
H A D | RNA.py | 2168 def gmlRNA(string, structure, ssfile, option): argument 2169 return _RNA.gmlRNA(string, structure, ssfile, option) 2171 def ssv_rna_plot(string, structure, ssfile): argument 2172 return _RNA.ssv_rna_plot(string, structure, ssfile) 2174 def svg_rna_plot(string, structure, ssfile): argument 2175 return _RNA.svg_rna_plot(string, structure, ssfile) 2177 def xrna_plot(string, structure, ssfile): argument 2178 return _RNA.xrna_plot(string, structure, ssfile) 2186 def PS_rna_plot_a_gquad(string, structure, ssfile, pre, post): argument 2187 return _RNA.PS_rna_plot_a_gquad(string, structure, ssfile, pre, post)
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/dports/biology/viennarna/ViennaRNA-2.4.18/interfaces/Python3/ |
H A D | RNA.py | 2168 def gmlRNA(string: "char *", structure: "char *", ssfile: "char *", option: "char") -> "int": 2169 return _RNA.gmlRNA(string, structure, ssfile, option) 2171 def ssv_rna_plot(string: "char *", structure: "char *", ssfile: "char *") -> "int": 2172 return _RNA.ssv_rna_plot(string, structure, ssfile) 2174 def svg_rna_plot(string: "char *", structure: "char *", ssfile: "char *") -> "int": 2175 return _RNA.svg_rna_plot(string, structure, ssfile) 2177 def xrna_plot(string: "char *", structure: "char *", ssfile: "char *") -> "int": 2178 return _RNA.xrna_plot(string, structure, ssfile) 2186 def PS_rna_plot_a_gquad(string: "char *", structure: "char *", ssfile: "char *", pre: "char *", pos… 2187 return _RNA.PS_rna_plot_a_gquad(string, structure, ssfile, pre, post)
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/dports/comms/kermit/kermit-9.0.305.04/ |
H A D | ckcpro.c | 56 #define ssfile 6 macro 1867 BEGIN ssfile; /* and switch to receive-file state */ in wart() local 2108 BEGIN ssfile; /* if ok, enter send-file state */ in wart() local 2131 BEGIN ssfile; /* If OK, enter send-file state */ in wart()
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