ajax/ensembl/ensrepeat.h

111 #define EnsPRepeatconsensus EnsORepeatconsensus*  macro
142     EnsPRepeatconsensus Repeatconsensus;
163 EnsPRepeatconsensus ensRepeatconsensusNewCpy(const EnsPRepeatconsensus rc);
165 EnsPRepeatconsensus ensRepeatconsensusNewIni(EnsPRepeatconsensusadaptor rca,
173 EnsPRepeatconsensus ensRepeatconsensusNewRef(EnsPRepeatconsensus rc);
175 void ensRepeatconsensusDel(EnsPRepeatconsensus *Prc);
178     const EnsPRepeatconsensus rc);
180 AjPStr ensRepeatconsensusGetClass(const EnsPRepeatconsensus rc);
182 AjPStr ensRepeatconsensusGetConsensus(const EnsPRepeatconsensus rc);
184 ajuint ensRepeatconsensusGetIdentifier(const EnsPRepeatconsensus rc);
186 ajuint ensRepeatconsensusGetLength(const EnsPRepeatconsensus rc);
188 AjPStr ensRepeatconsensusGetName(const EnsPRepeatconsensus rc);
190 AjPStr ensRepeatconsensusGetType(const EnsPRepeatconsensus rc);
192 AjBool ensRepeatconsensusSetAdaptor(EnsPRepeatconsensus rc,
195 AjBool ensRepeatconsensusSetClass(EnsPRepeatconsensus rc,
198 AjBool ensRepeatconsensusSetConsensus(EnsPRepeatconsensus rc,
201 AjBool ensRepeatconsensusSetIdentifier(EnsPRepeatconsensus rc,
204 AjBool ensRepeatconsensusSetLength(EnsPRepeatconsensus rc,
207 AjBool ensRepeatconsensusSetName(EnsPRepeatconsensus rc,
210 AjBool ensRepeatconsensusSetType(EnsPRepeatconsensus rc,
213 size_t ensRepeatconsensusCalculateMemsize(const EnsPRepeatconsensus rc);
215 AjBool ensRepeatconsensusTrace(const EnsPRepeatconsensus rc, ajuint level);
236     EnsPRepeatconsensus *Prc);
242     EnsPRepeatconsensus *Prc);
265                                          EnsPRepeatconsensus rc,
292 EnsPRepeatconsensus ensRepeatfeatureGetRepeatconsensus(
314                                           EnsPRepeatconsensus rc);