212                                          gint target_pos,  in Alignment_convert_coordinate()
252     gint target_pos;  member
377                               gint query_pos, gint target_pos){  in AlignmentView_add()
478                 gint query_pos, gint target_pos,  in AlignmentView_add_MATCH()
537                 gint query_pos, gint target_pos, Translate *translate){  in AlignmentView_add_GAP()
646                 gint query_pos, gint target_pos, gboolean is_5_prime,  in AlignmentView_add_SPLICE_SITE()
707                 gint query_pos, gint target_pos,  in AlignmentView_add_INTRON()
775                           gint query_pos, gint target_pos){  in AlignmentView_add_NER()
819             gint query_pos, gint target_pos,  in AlignmentView_add_SPLIT_CODON()
1042                 gint query_pos, gint target_pos, Translate *translate){  in AlignmentView_add_FRAMESHIFT()
1094                 gint query_pos, gint target_pos,  in AlignmentView_add_label_operation()
1189                   target_pos = alignment->region->target_start;  in AlignmentView_prepare()  local
1388                   target_pos = alignment->region->target_start;  in Alignment_get_equivalenced_matching()  local
1431                   target_pos = alignment->region->target_start;  in Alignment_get_equivalenced_matching_region()  local
1486                   target_pos = alignment->region->target_start;  in Alignment_get_equivalenced_total_region()  local
1540                   target_pos = alignment->region->target_start;  in Alignment_get_match_score()  local
2190                   gint  target_pos;  member
2761                                        gint target_pos,  in Alignment_display_gff_exon()
2814                             gint query_pos, gint target_pos, FILE *fp){  in Alignment_display_gff_utr()
2851                   target_pos = alignment->region->target_start;  in Alignment_display_gff_gene()  local
3097                   target_pos = alignment->region->target_start;  in Alignment_display_gff_similarity()  local
3191                   target_pos = alignment->region->target_start;  in Alignment_has_valid_alignment()  local