Lines Matching refs:snpInfo
88 snpInfo = cPar.snpInfo; in CopyFromParam()
168 for (size_t i = 0; i < snpInfo.size(); ++i) { in WriteFiles()
173 outfile << snpInfo[i].chr << "\t" << snpInfo[i].rs_number << "\t" in WriteFiles()
174 << snpInfo[i].base_position << "\t" << snpInfo[i].n_miss << "\t" in WriteFiles()
175 << snpInfo[i].a_minor << "\t" << snpInfo[i].a_major << "\t" << fixed in WriteFiles()
176 << setprecision(3) << snpInfo[i].maf << "\t"; in WriteFiles()
3668 for (vector<SNPINFO>::size_type t = 0; t < snpInfo.size(); ++t) { in AnalyzePlink()
3669 if (t % d_pace == 0 || t == snpInfo.size() - 1) { in AnalyzePlink()
3670 ProgressBar("Reading SNPs", t, snpInfo.size() - 1); in AnalyzePlink()
4653 for (vector<SNPINFO>::size_type t = 0; t < snpInfo.size(); ++t) { in AnalyzePlinkGXE()
4654 if (t % d_pace == 0 || t == snpInfo.size() - 1) { in AnalyzePlinkGXE()
4655 ProgressBar("Reading SNPs", t, snpInfo.size() - 1); in AnalyzePlinkGXE()